mRNA_L-digitata_M_contig101672.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A2D9CB40_9BACT (Uncharacterized protein n=1 Tax=Phycisphaerae bacterium TaxID=2026778 RepID=A0A2D9CB40_9BACT) HSP 1 Score: 224 bits (571), Expect = 9.010e-71 Identity = 106/128 (82.81%), Postives = 118/128 (92.19%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTELSGAVPQGA 384
HVAATPDT+ELCGPGFFAAM+DGAYF+NTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKD DW PEIA +PG+SLTHHVGAST+QAQLAVGE VRIVG ME+G+ALH+VN +L+G+VPQ A
Sbjct: 213 HVAATPDTKELCGPGFFAAMKDGAYFVNTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDTDWQPEIATIPGVSLTHHVGASTEQAQLAVGEETVRIVGQFMESGEALHIVNAKDLNGSVPQTA 340
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A2A4RPK4_9BACT (Uncharacterized protein n=1 Tax=bacterium TaxID=1869227 RepID=A0A2A4RPK4_9BACT) HSP 1 Score: 188 bits (477), Expect = 1.430e-56 Identity = 91/130 (70.00%), Postives = 106/130 (81.54%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTELSGAVPQGAGA 390
HVA DTR+LCGP FF AM+DGAYFINTSRGEIV+E+ELI A+KTKGIR GLDVYQDQPSSKDIDW PE+A +PG+SLTHHVGASTDQAQ+AV + +VRIV ETG H+VN+ +LS +V A A
Sbjct: 213 HVACNDDTRDLCGPLFFGAMKDGAYFINTSRGEIVNEQELINAVKTKGIRVGLDVYQDQPSSKDIDWCPELASLPGVSLTHHVGASTDQAQVAVAQEMVRIVEAYKETGTPKHIVNKAQLSESVSDMANA 342
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A812XRK8_9DINO (PGDH2 protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812XRK8_9DINO) HSP 1 Score: 173 bits (439), Expect = 8.920e-48 Identity = 84/120 (70.00%), Postives = 97/120 (80.83%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTEL 360
HVA PDT +LCGPGFF AM+ GA FINTSRGEIVDE ELIKA+K KGIR GLDVYQ+QPSSKDIDW PE+A++ G+SLTHHVGASTDQAQ AV V+RI+ ++E LHVVN+ L
Sbjct: 737 HVALCPDTDKLCGPGFFGAMKPGAMFINTSRGEIVDEAELIKAVKGKGIRVGLDVYQNQPSSKDIDWKPELAELEGVSLTHHVGASTDQAQEAVALEVIRIMHTVIEEARTLHVVNKDSL 856
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A3M2CMS1_9BACT (Phosphoglycerate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2CMS1_9BACT) HSP 1 Score: 161 bits (408), Expect = 3.210e-46 Identity = 77/130 (59.23%), Postives = 98/130 (75.38%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTELSGAVPQGAGA 390
HVA+TPDT+ LC FFAAM+ G++FINTSRG+IVDE ++ A K K IR G+DVYQDQP++K + W +IA++PG +LTHH GASTDQAQ AV E VVR+V L+ETG LH+VN L+G Q AG+
Sbjct: 212 HVASTPDTKGLCDARFFAAMKPGSFFINTSRGDIVDEAAMVAAAKEKDIRVGVDVYQDQPTAKAVGWTTKIAEIPGAALTHHCGASTDQAQAAVAEEVVRVVRTLIETGTPLHIVNGASLTGTPGQPAGS 341
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A2G2A481_9BACT (Uncharacterized protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A2G2A481_9BACT) HSP 1 Score: 140 bits (353), Expect = 7.210e-38 Identity = 71/121 (58.68%), Postives = 81/121 (66.94%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTELS 363
HV T +T+ C FF AM+ GAYFINTSRG +VDE L A KT GIRAGLDVY QP KD DW P IA VPG+ +HH GASTDQAQLAV + VVR+V ETG +V+N LS
Sbjct: 233 HVPVTAETKGSCDAAFFGAMKPGAYFINTSRGAVVDEAALAAACKTXGIRAGLDVYCXQPGFKDGDWCPGIANVPGVYCSHHCGASTDQAQLAVADEVVRLVXKYKETGXYENVINXDHLS 353
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A3M8FTQ6_9BACT (Uncharacterized protein n=1 Tax=Phycisphaera sp. TaxID=2030824 RepID=A0A3M8FTQ6_9BACT) HSP 1 Score: 139 bits (349), Expect = 2.250e-37 Identity = 70/120 (58.33%), Postives = 83/120 (69.17%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTEL 360
HV T +T+ C FF+AM+ GAYFINTSRG +VDE L +A ++KGIRA LDVY +QP KD DW P IA PG+ THH GASTDQAQLAV + VV +V ETG A VVNR +L
Sbjct: 222 HVPVTDETKGSCDKEFFSAMKPGAYFINTSRGPVVDEAALAEACQSKGIRAALDVYCEQPGFKDGDWCPSIANTPGVYCTHHCGASTDQAQLAVSDKVVELVKVFKETGAAECVVNRAKL 341
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A7V1M1B8_9BACT (Phosphoglycerate dehydrogenase n=1 Tax=Phycisphaerales bacterium TaxID=2052180 RepID=A0A7V1M1B8_9BACT) HSP 1 Score: 136 bits (343), Expect = 1.220e-36 Identity = 67/116 (57.76%), Postives = 86/116 (74.14%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVN 348
HV A T+ +C FF+AM+ G+YFINTSRG +VDE LI+A+K +GIRAGLDVYQ+QP+ K+ DW E+AKV G+ +HHVGASTDQAQ AV + VVR+V +TG +VVN
Sbjct: 207 HVPANDQTKGMCDSEFFSAMKPGSYFINTSRGALVDEPALIEAVKNRGIRAGLDVYQNQPAFKEGDWDCEVAKVDGVVCSHHVGASTDQAQQAVADEVVRLVRVFQDTGRFENVVN 322
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A3M2BCL1_9BACT (Phosphoglycerate dehydrogenase n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M2BCL1_9BACT) HSP 1 Score: 135 bits (339), Expect = 6.560e-36 Identity = 64/117 (54.70%), Postives = 83/117 (70.94%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNR 351
HV T +TR +C FF+ M+ G F+NT+RG IVDEK L++A++ K ++ GLDVY DQP K+ DWMP IA+ P + THH+GAST+QAQLAVGE VVRIV ETG + VN+
Sbjct: 227 HVPLTDETRGMCDAEFFSRMRRGTIFVNTARGAIVDEKALLEAVEAKDLKVGLDVYCDQPEEKECDWMPAIARHPNVITTHHIGASTEQAQLAVGEEVVRIVRVYRETGQFENQVNK 343
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A0B6WYT5_9BACT (D-3-phosphoglycerate dehydrogenase n=1 Tax=Pyrinomonas methylaliphatogenes TaxID=454194 RepID=A0A0B6WYT5_9BACT) HSP 1 Score: 135 bits (341), Expect = 9.470e-36 Identity = 68/123 (55.28%), Postives = 88/123 (71.54%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTELSGA 369
H+A TP+TR + G FFAAM++GAYFINTSRGEIVD+ LIKA++ +GIRAGLDVY +P++ D+ EIA+ P + THH+GASTDQAQ A+ VRI+ ETG +VVN E + A
Sbjct: 202 HLALTPETRGMIGAEFFAAMREGAYFINTSRGEIVDQAALIKAMRERGIRAGLDVYASEPTAGTDDFNDEIAREPNLYGTHHIGASTDQAQEAIAAETVRIIKTFKETGKVPNVVNLAERTPA 324
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Match: A0A660TU50_9SPIR (D-3-phosphoglycerate dehydrogenase n=1 Tax=Spirochaetes bacterium TaxID=2202144 RepID=A0A660TU50_9SPIR) HSP 1 Score: 135 bits (341), Expect = 9.630e-36 Identity = 68/119 (57.14%), Postives = 87/119 (73.11%), Query Frame = 1
Query: 1 HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRAGLDVYQDQPSSKDIDWMPEIAKVPGISLTHHVGASTDQAQLAVGEVVVRIVGNLMETGDALHVVNRTE 357
H+A TP+T+ + G FF A++DGAYFINTSR EIVDEK LIKAI+ KGIRAGLDV+ +PS K+ ++A PG+ THH+GAST+QAQ AV + VRIV N ++TG L+ VN E
Sbjct: 203 HLALTPETKGIIGKNFFNALKDGAYFINTSRAEIVDEKALIKAIEEKGIRAGLDVFSGEPSYKEGSIQDQLALNPGVYGTHHIGASTEQAQEAVADETVRIVENYLKTGKVLNCVNIME 321 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101672.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101672.2.1 >prot_L-digitata_M_contig101672.2.1 ID=prot_L-digitata_M_contig101672.2.1|Name=mRNA_L-digitata_M_contig101672.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=132bp HVAATPDTRELCGPGFFAAMQDGAYFINTSRGEIVDEKELIKAIKTKGIRback to top mRNA from alignment at L-digitata_M_contig101672:527..922- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101672.2.1 ID=mRNA_L-digitata_M_contig101672.2.1|Name=mRNA_L-digitata_M_contig101672.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=396bp|location=Sequence derived from alignment at L-digitata_M_contig101672:527..922- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101672:527..922- >mRNA_L-digitata_M_contig101672.2.1 ID=mRNA_L-digitata_M_contig101672.2.1|Name=mRNA_L-digitata_M_contig101672.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=396bp|location=Sequence derived from alignment at L-digitata_M_contig101672:527..922- (Laminaria digitata LdigPH10_18mv male)back to top |