mRNA_L-digitata_M_contig101671.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: A0A6H5KCP6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KCP6_9PHAE) HSP 1 Score: 128 bits (321), Expect = 2.240e-35 Identity = 63/78 (80.77%), Postives = 70/78 (89.74%), Query Frame = 1
Query: 154 VRRVLKEVSIRRRFYTG-DGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRALRPPQEEGEGV 384
+RR+ KE+SIR+R+Y+G DGQPFPPGPSAVVLVSHGDALQLLQC LAGRP EQHRSLPHLENCG+R LRPP E EGV
Sbjct: 1 MRRLRKEISIRQRYYSGADGQPFPPGPSAVVLVSHGDALQLLQCALAGRPAEQHRSLPHLENCGIRVLRPPPGE-EGV 77
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: UPI00140C2320 (histidine phosphatase family protein n=1 Tax=Pseudomaricurvus alcaniphilus TaxID=1166482 RepID=UPI00140C2320) HSP 1 Score: 81.6 bits (200), Expect = 1.860e-16 Identity = 47/118 (39.83%), Postives = 68/118 (57.63%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRALRP 360
LRER FG+ +G D +Y +VWALDA ++ H FGVE ++V R ++ ++ ++ S GQ ++LV+HGD LQ+LQ AG+P +HRSLPHL +R L P
Sbjct: 97 LRERDFGELDGAADS-NYARVWALDADNADHKTFGVESVNQVRQRALQLLAQIEQQCS---------GQ-------TIILVAHGDLLQILQTWFAGQPAARHRSLPHLGTAELRPLNP 197
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: A0A7S2DRX8_9EUKA (Hypothetical protein n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2DRX8_9EUKA) HSP 1 Score: 78.2 bits (191), Expect = 4.890e-16 Identity = 47/117 (40.17%), Postives = 60/117 (51.28%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRALR 357
LRER FG+ +G D Y+ VW DALSS H EFG E S V R VV ++ + PG +++V+HGD LQ+LQ A + HRSL HL +RALR
Sbjct: 2 LRERSFGELDGQSD-KRYQDVWQHDALSSTHTEFGSEAISSVQERAWGVVEQMESNEQL-------------PGRWMIIVVAHGDVLQILQTAFARVDVRTHRSLEHLPTATLRALR 104
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: UPI001D0B8B2A (histidine phosphatase family protein n=1 Tax=Halomonas malpeensis TaxID=1172368 RepID=UPI001D0B8B2A) HSP 1 Score: 80.1 bits (196), Expect = 6.950e-16 Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHL 330
LRERGFG+FEG D +Y VW DA S+ H GVEP S VAAR +R ++ + R YTG+ +++VSHGD LQ+L LAGRPL +HR P L
Sbjct: 97 LRERGFGEFEGGADS-AYPTVWEQDAASAEHDTGGVEPVSRVAAR----MREAIEALEQR---YTGE---------VILVVSHGDPLQILLTALAGRPLTRHREQPAL 187
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: F0Y5Y4_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5Y4_AURAN) HSP 1 Score: 80.1 bits (196), Expect = 8.630e-16 Identity = 54/119 (45.38%), Postives = 62/119 (52.10%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPS--YEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRALR 357
LRER FGD +G GP+ YE VWA DA + H VE V ART A VR G+G+ V+LVSHGDALQ+LQ A HRSLPHLE C +R LR
Sbjct: 101 LRERDFGDLDG---GPNDTYEDVWARDAADAGHEWSRVESVERVLARTTAAVREADA---------AGEGR-------LVLLVSHGDALQILQTAFADVDPRTHRSLPHLETCELRPLR 200
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: UPI00166A5D18 (histidine phosphatase family protein n=1 Tax=Halomonas lutescens TaxID=1602943 RepID=UPI00166A5D18) HSP 1 Score: 79.3 bits (194), Expect = 1.400e-15 Identity = 50/108 (46.30%), Postives = 63/108 (58.33%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHL 330
LRER FG+ +G D Y VWA DA S+ H ++ VEP S VAAR AV+ ++ +RF TG+ V++VSHGD LQ+L LAGRPL QHR P L
Sbjct: 97 LRERHFGELDGQAD-HHYPDVWAFDAQSAEHAQWQVEPVSRVAARMCAVLE------ALEQRF-TGE---------TVLVVSHGDPLQILLAALAGRPLTQHREQPAL 187
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: R1BXL2_EMIHU (Uncharacterized protein n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1BXL2_EMIHU) HSP 1 Score: 79.7 bits (195), Expect = 1.510e-15 Identity = 51/119 (42.86%), Postives = 59/119 (49.58%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRALRPP 363
LRER FG G D Y VW DA+S+ H EFG EP + V R VV R+ E+ PG VVLV+HGD LQ+LQ A HRSLPHLE +R L P
Sbjct: 111 LRERSFGTLSGGPDS-RYADVWVHDAVSATHTEFGSEPVTSVRERAWGVVERLEAEL---------------PGRCMVVLVAHGDVLQILQTRFACVDPRTHRSLPHLETATLRRLSLP 213
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: A0A8J2WYG9_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WYG9_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.540e-15 Identity = 54/118 (45.76%), Postives = 64/118 (54.24%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPS--YEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRAL 354
LRER FGDFE GP+ YE VW DA+ + H +GVE A V R A V+RV +G AV+LVSHGD LQ+LQ AG + HRSLPHLE C +R L
Sbjct: 129 LRERDFGDFEL---GPNTAYEAVWEQDAIDATHTAWGVEAACAVLERAAGAVQRVEG---------AREGH-------AVLLVSHGDCLQILQTAFAGVDVSAHRSLPHLETCELRRL 227
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: Z9JPC2_9MICO (Fructose 1,6-bisphosphatase n=1 Tax=Brachybacterium phenoliresistens TaxID=396014 RepID=Z9JPC2_9MICO) HSP 1 Score: 79.3 bits (194), Expect = 2.480e-15 Identity = 52/118 (44.07%), Postives = 67/118 (56.78%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPS--YEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRAL 354
LRER FG F D+GP+ Y+ +WA DA + GE GVE EVAAR AV L+E R PG + VVLV+HGD LQ+L + +GRP +HR+L HL N +R +
Sbjct: 87 LRERCFGTF---DEGPATAYDGIWAADASGAHPGE-GVESVEEVAARAMAV----LEEARAR------------PGQAPVVLVAHGDVLQILLAVASGRPAREHRALAHLGNAELREI 184
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Match: A0A2N7U5J8_9GAMM (Histidine phosphatase family protein n=1 Tax=Halomonas endophytica TaxID=2033802 RepID=A0A2N7U5J8_9GAMM) HSP 1 Score: 78.6 bits (192), Expect = 2.700e-15 Identity = 50/116 (43.10%), Postives = 61/116 (52.59%), Query Frame = 1
Query: 7 LRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAVVRRVLKEVSIRRRFYTGDGQPFPPGPSAVVLVSHGDALQLLQCLLAGRPLEQHRSLPHLENCGVRAL 354
LRER FG+FEG D Y +VWALDA S H E VE + VAAR ++ V+ + RR T ++LVSHGD LQ+L L GRPL QHR P L + L
Sbjct: 97 LRERVFGEFEGQPD-EHYARVWALDAHSPEHREHAVESVASVAAR----MQEVIASLESERRGET------------ILLVSHGDPLQILLTALGGRPLSQHRDQPPLPPASITPL 195 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101671.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101671.2.1 >prot_L-digitata_M_contig101671.2.1 ID=prot_L-digitata_M_contig101671.2.1|Name=mRNA_L-digitata_M_contig101671.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=144bp RDLRERGFGDFEGHDDGPSYEKVWALDALSSRHGEFGVEPASEVAARTAAback to top mRNA from alignment at L-digitata_M_contig101671:465..896+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101671.2.1 ID=mRNA_L-digitata_M_contig101671.2.1|Name=mRNA_L-digitata_M_contig101671.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=432bp|location=Sequence derived from alignment at L-digitata_M_contig101671:465..896+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101671:465..896+ >mRNA_L-digitata_M_contig101671.2.1 ID=mRNA_L-digitata_M_contig101671.2.1|Name=mRNA_L-digitata_M_contig101671.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=432bp|location=Sequence derived from alignment at L-digitata_M_contig101671:465..896+ (Laminaria digitata LdigPH10_18mv male)back to top |