mRNA_L-digitata_M_contig101573.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101573.1.1
Unique NamemRNA_L-digitata_M_contig101573.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A533RC45_9DELT (PASTA domain-containing protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A533RC45_9DELT)

HSP 1 Score: 270 bits (690), Expect = 8.340e-82
Identity = 143/308 (46.43%), Postives = 198/308 (64.29%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR++   D +Q A  LAPILD+P+  +  +L  D+ F +L+R+VP  +++ VR L+  A+GA  E +RFY N  + + VLGFT L+ +G AGIE  YD  L G    +   RDALG  + S   V E    G D+ LTLD ++Q+  ER L   V     K+G  +VLEP SG +LA+A+ P YNPN ++  KP D  NRA+S  +EPGST+K+  +AA L EG++ P   I+CEGG W+ G   IHD+ H +  L+  E+L+ SSNI SAKIG MLER+RLY +LR+FGF  +TG+ELPGE  G++
Sbjct:   82 EPRKL--ADRDQAARLLAPILDLPQATVRAKLGGDKGFVWLKRQVPPTVSQRVRNLKLDAVGAIKEHQRFYPNSTVGAQVLGFTGLDPKGLAGIEASYDTTLLGRGGYLVMERDALGRGIGSGEPVIEGATRGHDLHLTLDENLQYIVERELAAGVAEFNAKAGAVIVLEPSSGRILAMANQPDYNPNAVSRHKPQDWRNRAISDTFEPGSTLKVFVMAAGLNEGVVTPTQLINCEGGSWKVGGRVIHDS-HPHGVLTAEEVLKVSSNIGSAKIGRMLERKRLYGYLREFGFGLKTGLELPGEENGIL 386          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A5G8K6_GEOUR (Peptidoglycan synthetase FtsI n=1 Tax=Geotalea uraniireducens (strain Rf4) TaxID=351605 RepID=A5G8K6_GEOUR)

HSP 1 Score: 264 bits (674), Expect = 8.030e-80
Identity = 142/306 (46.41%), Postives = 203/306 (66.34%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRG 918
            EPR +E     + AAKLAP+L +PK+++E++L  ++ F +L+RR+   +   ++ L    IG   E KRFY N  +ASHV+GFT L+ EG  GIE  YD  + GS+  +   RDALG  +  +G V ++  +G ++TLTLD++IQ+ AE+ L +AV T+  K+G+ALV+EP++G VLA+A+YP++NPN      P    NR++S  +EPGST K+  +AAALEE +I+P    +CE G +  G  TIHD  HRY  LS+ +IL+ SSNI +AKIG  L +ERLY  L  FGF ER+GI+LPGE  G
Sbjct:   83 EPRNME--SLPEAAAKLAPLLALPKEQVEKKLNGNKNFVWLQRRMAPDLVARIKSLDLDGIGFVKEGKRFYPNSEVASHVVGFTGLDPEGLEGIELKYDSTILGSTGYLVTERDALGRDIDLKGAVVKSADKGHNVTLTLDKNIQYIAEKELTKAVETNGAKAGIALVMEPETGRVLAMANYPNFNPNTYFKYSPQALRNRSISDSFEPGSTFKIFLVAAALEEKVIRPTDGFNCENGSYSIGGRTIHDT-HRYGGLSVAQILKYSSNIGAAKIGTRLGQERLYAALTNFGFGERSGIDLPGESGG 385          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A7Y7NR40_9DELT (Transpeptidase family protein n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A7Y7NR40_9DELT)

HSP 1 Score: 264 bits (674), Expect = 8.380e-80
Identity = 136/308 (44.16%), Postives = 199/308 (64.61%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR +E  D    AA+LAP+L   K+ +E+++K+ + F +L RR+   +A  +RKL    IG   EPKRFY N  + SHV+GFT L+ EG  G+E+ +D  L G++  +   RDALG  + ++G V +    G ++ LTLD++IQ+ AE+ L  AV   + K G+A+V+EP SG +LA+A+YP++NPN+     P    N+A++  +EPGSTMK+  IAAALEE  ++P    +CE G +  G  TIHD  H+Y  LS+ ++L+ SSNI +AKIG  L  ERLY +LR FGF  R+ I+LPGE+ G +
Sbjct:   83 EPRNVE--DQSAAAAQLAPLLGTTKEALEKKMKASKGFAWLARRLTPEVAAQIRKLDIDGIGFVKEPKRFYPNAEIGSHVIGFTGLDPEGLEGVEKKFDTTLLGNTGYMVTERDALGRDIGNKGMVTQNASTGQNLVLTLDKNIQYIAEKELAAAVENSRAKGGIAVVMEPASGKILAMANYPTFNPNSFGKFPPNALRNKAITDSFEPGSTMKVFLIAAALEEKSVKPEDGFNCENGSYNIGGRTIHDT-HKYGRLSVGDVLKYSSNIGAAKIGAKLGAERLYGYLRGFGFGARSNIDLPGEVSGYL 387          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A6I1KDU8_9DELT (Cell division protein FtsI n=1 Tax=Geobacteraceae bacterium TaxID=2282154 RepID=A0A6I1KDU8_9DELT)

HSP 1 Score: 263 bits (672), Expect = 1.490e-79
Identity = 136/306 (44.44%), Postives = 203/306 (66.34%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRG 918
            EPR +E  +  + AA+LAP+L I ++ +E++L   R F +L+RR+   + K ++ L    +G   E KRFY +  +ASHV+GFT ++ EG  GIE  YD  + G++  +   RDALG  +  +G V ++   G ++TLTLD++IQ+ AE+ L +AV +   K G+ALV+EP+SG VLA+A+YP +NPN+    +PG   NR+++  +EPGST K+  +AAALEE  + PR   +CE G +  G  TIHD  H+Y  LS+ E+L+ SSNI +AKIG  L ++RLY +L+KFGF E++GI+LPGE  G
Sbjct:   83 EPRNME--NIREAAARLAPVLGIARETLEKKLTGSRHFVWLQRRITPDIVKKIKDLEIEGVGFVKESKRFYPHSEMASHVIGFTGVDPEGLEGIELKYDATILGNTGYLVTERDALGRDIALKGTVVKSASRGHNVTLTLDKNIQYIAEKELAKAVESCGAKGGIALVMEPESGKVLAMANYPGFNPNSYFRYQPGLLRNRSIADSFEPGSTFKVFLVAAALEERAVTPRDGFNCENGSYSIGGRTIHDT-HKYGHLSVAEVLKYSSNIGAAKIGSRLGQDRLYGYLKKFGFGEKSGIDLPGEAGG 385          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A2N2G7E2_9DELT (Penicillin-binding protein n=1 Tax=Deltaproteobacteria bacterium HGW-Deltaproteobacteria-23 TaxID=2013751 RepID=A0A2N2G7E2_9DELT)

HSP 1 Score: 263 bits (671), Expect = 2.420e-79
Identity = 134/306 (43.79%), Postives = 196/306 (64.05%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRG 918
            EPR +  GD   +AAKLAP+L    + +E+++ + R F +L RR+   +A  +R L+   +G   E KRFY N  + SHV+GFT L+ EG  G+E+ +D  L G++  +   RDALG  + + G V  +   G +I LT+D++IQ+ AE+ L  AV   + K G+A+V+EP SG +LA+A+YP++NPNN     P    N+A++  +EPGSTMK+  IAAALEE +++P    DCE G +  G  TIHD  H+Y  LS+ ++L+ SSNI +AKIG  L  ERLY +LR FGF  ++ I+LPGE+ G
Sbjct:   83 EPRNV--GDISAVAAKLAPVLGTTGEALEKKMNASRGFAWLARRLTPEVAAQIRALKIDGLGFIKETKRFYPNAEIGSHVIGFTGLDPEGLEGVEKRFDSTLLGNTGYIVTERDALGRDIGTHGVVTRSASAGQNIVLTIDKNIQYIAEKELAAAVEGSRAKGGIAIVMEPGSGKILAMANYPTFNPNNFGKFPPAALRNKAITDSFEPGSTMKVFIIAAALEEKVVKPADGFDCENGSYNIGGRTIHDT-HKYGRLSVGDVLKYSSNIGAAKIGTRLGPERLYGYLRSFGFGAKSSIDLPGEVGG 385          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: UPI001BD97A7A (transpeptidase family protein n=1 Tax=Geobacter luticola TaxID=1114878 RepID=UPI001BD97A7A)

HSP 1 Score: 262 bits (669), Expect = 4.300e-79
Identity = 138/308 (44.81%), Postives = 201/308 (65.26%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR IE  D    AA+LAPIL + +  + R+++  + FT+L+R+V    A+ VR L    IG   E KRFY N  +A+HV+GFT L+  G  G+E  Y+  + G++  +   RDALG  V  +G V +   +G ++TLTLD++IQ+ AE+ L +AV   + K+G+ALV+EP++G +LA+A+YP++NPN+ A   P    NR+V+  +EPGST K+  +AAAL+E +I  R   +CE G +  G  TIHD  HRY  LS+ ++L+ SSNI +AKIG  L  ERLY +LR FGF ER+G++LPGE  G +
Sbjct:   83 EPRNIE--DIPAAAAQLAPILGVSRDELVRKMRGSKNFTWLQRQVTPETAQKVRDLEIEGIGFVKESKRFYPNAEIAAHVIGFTGLDPAGLEGVELRYNSTILGNTGYLVTERDALGRDVALKGMVVKKASKGQNVTLTLDKNIQYLAEKELTKAVLESRAKAGIALVMEPQTGKILAMANYPNFNPNSYAKFGPQQLRNRSVADSFEPGSTFKVFLVAAALQEKVISARDGFNCENGSYNIGGRTIHDT-HRYGWLSVADVLKYSSNIGAAKIGTRLGPERLYNYLRSFGFGERSGLDLPGEASGYL 387          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A562WSF1_9DELT (Peptidoglycan synthetase FtsI n=1 Tax=Geobacter argillaceus TaxID=345631 RepID=A0A562WSF1_9DELT)

HSP 1 Score: 262 bits (669), Expect = 4.390e-79
Identity = 142/309 (45.95%), Postives = 203/309 (65.70%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHL-NRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR I+  D    AAKLAP+L + +  +E++LKS R F +L+RR+   + K +++L    IG   E KRFY N  +A HV+GFT L+ EG  G+ER YD  L G+   +   RDALG  +   G V ++  +G ++TLTLD++IQ+ AE+ L +AV T + K G+A+V+EP++G +LA+A+ PS+NPN   G  P   L N+AV+  +EPGSTMK+  IA+ALEE ++ P    +CEGG +  G  TIHD  H+Y  LS+ +IL+ SSNI +AKIG  +  ERLY++LR FGF ER+ I+LP E  G +
Sbjct:   83 EPRSID--DIPGTAAKLAPLLGMTRPELEQKLKSARNFVWLQRRITPDLTKRIKELELDGIGFAKETKRFYPNAEIAGHVIGFTGLDPEGLEGVERRYDTILLGNDGYLITERDALGRDIALRGTVVKSASKGYNLTLTLDKNIQYLAEKELAKAVETSRAKGGIAIVMEPQTGKILAMANAPSFNPNAY-GRYPAQVLRNKAVADSFEPGSTMKVFLIASALEEKVVSPGDGFNCEGGSYAIGGRTIHDT-HKYGRLSVADILKYSSNIGAAKIGARMGAERLYRYLRGFGFGERSAIDLPAEASGYL 387          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A399IAU5_9DELT (Penicillin-binding protein n=2 Tax=unclassified Geobacter TaxID=2627627 RepID=A0A399IAU5_9DELT)

HSP 1 Score: 261 bits (668), Expect = 6.170e-79
Identity = 138/308 (44.81%), Postives = 199/308 (64.61%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR +E   A   AA LAP+L + +  + R+++  + F +L+R+V    A+ VR L    IG   E KRFY N  +ASHV+GFT L+  G  G+E  Y+  + G++  +   RDALG  V  +G V +   +G ++TLTLD++IQ+ AE+ L +AV   + K+G+ALV+EP++G +LA+A+YP++NPN  +   P    +RAV+  +EPGST K+  +AAALEE ++ PR   +CE G +  G  TIHD  HRY  LS+ E+L+ SSNI +AKIG  L  ERLY +LR FGF ER+GI+LPGE  G +
Sbjct:   83 EPRNVENIPA--AAALLAPVLGVSRDELLRKMQGSKNFCWLQRQVTPEKAQKVRDLEIEGIGFVKESKRFYPNAEIASHVIGFTGLDPAGLEGVELKYNATILGNTGYIVTERDALGRNVALKGMVVKKASKGQNVTLTLDKNIQYLAEKELAKAVLGSRAKAGIALVMEPQTGKILAMANYPNFNPNAYSDFGPQQLRDRAVADSFEPGSTFKVFLVAAALEEKIVTPREGFNCENGSYNIGGRTIHDT-HRYGRLSVAEVLKYSSNIGAAKIGTRLGPERLYNYLRSFGFGERSGIDLPGEASGYL 387          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: B9M166_GEODF (Peptidoglycan transglycosylase and transpeptidase FtsI n=1 Tax=Geotalea daltonii (strain DSM 22248 / JCM 15807 / FRC-32) TaxID=316067 RepID=B9M166_GEODF)

HSP 1 Score: 259 bits (662), Expect = 4.730e-78
Identity = 137/308 (44.48%), Postives = 200/308 (64.94%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRGLM 924
            EPR +E  +    AAKLAP+L +P +++E++LK  R F +L+RR+    A A++ L    IG   E KRFY N  +A+HV+GFT ++ EG  GIE  YD  + GS+  +   RDALG  V+S+G V +   +G ++TLTLD++IQ+ AE+ L +AV T+  K+G+ALV+EP +G +LA+A+YP++NPN  +        NR+++  +EPGST K+   A ALE+  I+P    +CE G +  G  TIHD  H+Y  LSI +IL+ SSNI +AKIG  L  ++LY  L  FGF E+TG++LPGE  G +
Sbjct:   83 EPRNVE--NIPDAAAKLAPLLSMPAEQVEKKLKGSRNFVWLQRRMAPDQAAAIKALALEGIGFVKESKRFYPNSEIAAHVVGFTGMDPEGLEGIELKYDSTILGSTGYLVTERDALGREVYSKGTVVKNPAKGQNVTLTLDKNIQYIAEKELIKAVETNGAKAGIALVMEPATGRILAMANYPNFNPNTFSKYAQQALRNRSIADSFEPGSTFKIFLAATALEQKAIRPGDGFNCENGSYSIGGRTIHDT-HKYGYLSIAQILKYSSNIGAAKIGARLGNDKLYAGLTGFGFGEKTGVDLPGESSGTL 387          
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Match: A0A6I2SVE8_9DELT (PASTA domain-containing protein n=1 Tax=Geobacter sp. TaxID=46610 RepID=A0A6I2SVE8_9DELT)

HSP 1 Score: 259 bits (661), Expect = 7.070e-78
Identity = 132/306 (43.14%), Postives = 203/306 (66.34%), Query Frame = 1
Query:    1 EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMAKAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDDALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAERALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLNRAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDANHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIELPGELRG 918
            EPR IE  +  ++A  LAP+L +P  ++ERRL   + F +L+R++   +   ++KL    IG   E KR+Y N+ +A  V+GFT ++ EG  G+E  Y+  + GS+  +   RDALG  +  +  V +   +G+++TLTLD++IQ+ AE+ L +AVT    K+G+ALV+EP++G +LA+A+YP +NPN     +P    NR+++  +EPGST K+  +AAAL+EG+I PR   DCE G +  G  TIHD  H+Y  +SI +IL+ SSNI +AKIG  L +ERLY++L+ FGF +++GI+LPGE+ G
Sbjct:   83 EPRNIE--NPREVATSLAPLLGVPVSQLERRLSGSKGFVWLQRQITPDVTAKIKKLELEGIGFVKESKRYYPNLEVAGSVIGFTGVDPEGLEGVELKYNSTILGSTGYMVTERDALGRDIALKEGVVKGPSKGNNVTLTLDKNIQYLAEKELAKAVTESGAKAGIALVMEPQTGRILAMANYPGFNPNVYYKYQPAQLRNRSIADSFEPGSTFKVFLMAAALDEGVINPRDTFDCEMGSYNIGGRTIHDT-HKYGRISIADILKYSSNIGAAKIGSRLGQERLYRYLKGFGFGQKSGIDLPGEVAG 385          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A533RC45_9DELT8.340e-8246.43PASTA domain-containing protein n=1 Tax=Deltaprote... [more]
A5G8K6_GEOUR8.030e-8046.41Peptidoglycan synthetase FtsI n=1 Tax=Geotalea ura... [more]
A0A7Y7NR40_9DELT8.380e-8044.16Transpeptidase family protein n=1 Tax=Geobacterace... [more]
A0A6I1KDU8_9DELT1.490e-7944.44Cell division protein FtsI n=1 Tax=Geobacteraceae ... [more]
A0A2N2G7E2_9DELT2.420e-7943.79Penicillin-binding protein n=1 Tax=Deltaproteobact... [more]
UPI001BD97A7A4.300e-7944.81transpeptidase family protein n=1 Tax=Geobacter lu... [more]
A0A562WSF1_9DELT4.390e-7945.95Peptidoglycan synthetase FtsI n=1 Tax=Geobacter ar... [more]
A0A399IAU5_9DELT6.170e-7944.81Penicillin-binding protein n=2 Tax=unclassified Ge... [more]
B9M166_GEODF4.730e-7844.48Peptidoglycan transglycosylase and transpeptidase ... [more]
A0A6I2SVE8_9DELT7.070e-7843.14PASTA domain-containing protein n=1 Tax=Geobacter ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101573contigL-digitata_M_contig101573:2..925 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog316067.Geob_0774
Preferred nameftsI
PFAMsPASTA,PBP_dimer,Transpeptidase
Model size924
Max annot lvl28221|Deltaproteobacteria
KEGG koko:K03587
KEGG Pathwayko00550,ko01501,map00550,map01501
Hectar predicted targeting categoryother localisation
Exons1
Evalue7.75e-79
EggNOG OGsCOG0768@1|root,COG0768@2|Bacteria,1MUNY@1224|Proteobacteria,42M1T@68525|delta/epsilon subdivisions,2WK0W@28221|Deltaproteobacteria,43TGP@69541|Desulfuromonadales
EC3.4.16.4
DescriptionPenicillin-binding protein, dimerisation domain
Cds size924
COG categoryM
BRITEko00000,ko00001,ko01000,ko01011,ko03036
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406620.297642-CDS-L-digitata_M_contig101573:1..9251682406620.297642-CDS-L-digitata_M_contig101573:1..925Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101573 2..925 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101573.1.1prot_L-digitata_M_contig101573.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101573 2..925 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101573.1.1

>prot_L-digitata_M_contig101573.1.1 ID=prot_L-digitata_M_contig101573.1.1|Name=mRNA_L-digitata_M_contig101573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=308bp
EPRRIEKGDAEQMAAKLAPILDIPKKRIERRLKSDRAFTYLRRRVPAGMA
KAVRKLRYRAIGAHPEPKRFYSNVGLASHVLGFTNLEGEGKAGIERIYDD
ALQGSSAKVPGLRDALGNRVFSEGFVPEAVLEGSDITLTLDRHIQHAAER
ALQEAVTTHKGKSGVALVLEPKSGDVLALASYPSYNPNNLAGSKPGDHLN
RAVSAVYEPGSTMKMVTIAAALEEGLIQPRTEIDCEGGGWRYGKHTIHDA
NHRYDELSITEILQKSSNICSAKIGIMLERERLYQWLRKFGFAERTGIEL
PGELRGLM
back to top

mRNA from alignment at L-digitata_M_contig101573:2..925+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101573.1.1 ID=mRNA_L-digitata_M_contig101573.1.1|Name=mRNA_L-digitata_M_contig101573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=924bp|location=Sequence derived from alignment at L-digitata_M_contig101573:2..925+ (Laminaria digitata LdigPH10_18mv male)
GAGCCTCGTCGTATCGAAAAGGGTGATGCCGAGCAGATGGCGGCCAAGCT GGCCCCCATCTTGGATATCCCCAAAAAACGCATCGAGCGCCGGCTGAAGA GCGACCGCGCCTTCACTTACCTGCGCCGGCGCGTGCCCGCCGGTATGGCG AAGGCGGTGCGCAAGCTGCGGTACCGAGCCATCGGCGCGCACCCCGAGCC CAAGCGCTTTTATTCGAACGTCGGCCTCGCCTCACACGTCTTGGGGTTCA CGAACCTCGAAGGCGAGGGCAAGGCCGGTATCGAGCGCATCTACGACGAC GCCCTTCAGGGCTCGTCCGCCAAGGTGCCGGGCCTGCGGGACGCGCTGGG CAACCGCGTTTTCAGTGAGGGCTTTGTGCCCGAGGCCGTGCTGGAAGGCA GCGACATCACGCTCACGTTGGATCGTCATATTCAACACGCGGCCGAACGT GCGCTGCAGGAGGCCGTGACCACTCACAAGGGCAAGTCGGGCGTGGCGCT GGTGCTGGAGCCCAAGAGCGGCGACGTCCTGGCGTTGGCAAGCTACCCTT CGTACAACCCCAATAACCTGGCGGGCAGCAAGCCGGGCGATCATCTCAAC CGAGCCGTCAGCGCGGTCTACGAGCCAGGCTCGACCATGAAGATGGTGAC CATCGCGGCGGCCTTGGAGGAGGGTTTGATCCAGCCCCGGACCGAGATCG ACTGCGAGGGCGGGGGTTGGCGCTACGGCAAGCACACGATCCACGACGCC AACCATCGCTACGATGAGCTCAGCATCACCGAGATCCTGCAGAAGTCCTC GAACATCTGCTCCGCGAAGATCGGGATCATGCTGGAGCGGGAGCGCCTGT ATCAGTGGTTGCGCAAGTTCGGTTTCGCGGAGCGCACCGGCATTGAATTG CCGGGTGAGTTGCGCGGCCTGATG
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig101573:2..925+

>mRNA_L-digitata_M_contig101573.1.1 ID=mRNA_L-digitata_M_contig101573.1.1|Name=mRNA_L-digitata_M_contig101573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=924bp|location=Sequence derived from alignment at L-digitata_M_contig101573:2..925+ (Laminaria digitata LdigPH10_18mv male)
GAGCCTCGTCGTATCGAAAAGGGTGATGCCGAGCAGATGGCGGCCAAGCT
GGCCCCCATCTTGGATATCCCCAAAAAACGCATCGAGCGCCGGCTGAAGA
GCGACCGCGCCTTCACTTACCTGCGCCGGCGCGTGCCCGCCGGTATGGCG
AAGGCGGTGCGCAAGCTGCGGTACCGAGCCATCGGCGCGCACCCCGAGCC
CAAGCGCTTTTATTCGAACGTCGGCCTCGCCTCACACGTCTTGGGGTTCA
CGAACCTCGAAGGCGAGGGCAAGGCCGGTATCGAGCGCATCTACGACGAC
GCCCTTCAGGGCTCGTCCGCCAAGGTGCCGGGCCTGCGGGACGCGCTGGG
CAACCGCGTTTTCAGTGAGGGCTTTGTGCCCGAGGCCGTGCTGGAAGGCA
GCGACATCACGCTCACGTTGGATCGTCATATTCAACACGCGGCCGAACGT
GCGCTGCAGGAGGCCGTGACCACTCACAAGGGCAAGTCGGGCGTGGCGCT
GGTGCTGGAGCCCAAGAGCGGCGACGTCCTGGCGTTGGCAAGCTACCCTT
CGTACAACCCCAATAACCTGGCGGGCAGCAAGCCGGGCGATCATCTCAAC
CGAGCCGTCAGCGCGGTCTACGAGCCAGGCTCGACCATGAAGATGGTGAC
CATCGCGGCGGCCTTGGAGGAGGGTTTGATCCAGCCCCGGACCGAGATCG
ACTGCGAGGGCGGGGGTTGGCGCTACGGCAAGCACACGATCCACGACGCC
AACCATCGCTACGATGAGCTCAGCATCACCGAGATCCTGCAGAAGTCCTC
GAACATCTGCTCCGCGAAGATCGGGATCATGCTGGAGCGGGAGCGCCTGT
ATCAGTGGTTGCGCAAGTTCGGTTTCGCGGAGCGCACCGGCATTGAATTG
CCGGGTGAGTTGCGCGGCCTGATG
back to top