mRNA_L-digitata_M_contig101571.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101571.1.1
Unique NamemRNA_L-digitata_M_contig101571.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: A0A222EA47_9RHOB (HPr kinase n=2 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A222EA47_9RHOB)

HSP 1 Score: 566 bits (1460), Expect = 6.430e-203
Identity = 293/301 (97.34%), Postives = 298/301 (99.00%), Query Frame = 1
Query:    1 RERPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQEGRGS 903
            RE PDVVAVSTRSR+ISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIA+ELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPI+VSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAA TLLRIVPGAETAP+EVARRFAK VARFVPDRGTLLVSGGATAEAVLDALGI+VLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQEGRGS
Sbjct:   41 REHPDVVAVSTRSRDISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIAAELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIRVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAATLLRIVPGAETAPDEVARRFAKGVARFVPDRGTLLVSGGATAEAVLDALGIKVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQEGRGS 341          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: A0A239KPK0_9RHOB (Uncharacterized conserved protein YgbK, DUF1537 family n=1 Tax=Antarctobacter heliothermus TaxID=74033 RepID=A0A239KPK0_9RHOB)

HSP 1 Score: 490 bits (1262), Expect = 9.520e-173
Identity = 256/297 (86.20%), Postives = 271/297 (91.25%), Query Frame = 1
Query:    1 RERPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQE 891
            R  PDVVAVSTRSRE+S DEALARVRSVL QMP G RLFKKIDSRLKGNIA+ELTAF  AP+LVAPAIPEFGRVVVDG LTGFGVAHPI+V+SVLGDHATRARIPDVQS +D+L A+AAL PDE+LVGARGLAHALR SMPGAAPDI SLPGPLCFAVGSADPITLAQMDALR HHPGLQVI+APSGTVP+GI  DA VTL++IVPGA TA +EVARRFAK VAR V DRGTLLVSGGATAEAVLDALGI+VLTIEGE LPGLPCCRVG R IISKSGGFGAEDTFVRLLNMTRLQE
Sbjct:   41 RVHPDVVAVSTRSREVSPDEALARVRSVLLQMPTGTRLFKKIDSRLKGNIAAELTAFEVAPLLVAPAIPEFGRVVVDGRLTGFGVAHPIRVASVLGDHATRARIPDVQSDQDILAAIAALAPDEVLVGARGLAHALRASMPGAAPDIASLPGPLCFAVGSADPITLAQMDALRRHHPGLQVIEAPSGTVPDGIRTDAPVTLVQIVPGAGTARDEVARRFAKGVARIVSDRGTLLVSGGATAEAVLDALGIDVLTIEGEVLPGLPCCRVGHRRIISKSGGFGAEDTFVRLLNMTRLQE 337          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: A0A0B3RYP8_9RHOB (Putative inner membrane protein n=7 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A0B3RYP8_9RHOB)

HSP 1 Score: 293 bits (749), Expect = 6.280e-95
Identity = 165/296 (55.74%), Postives = 205/296 (69.26%), Query Frame = 1
Query:   13 DVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQEGRG 900
            D++AVSTRSREI A++A ARV  VL  +P G RLFKK+DSRLKGNIA+EL+A    P+LVAPAIP+FGR+V  G ++GFGV  PI V++ LG     A IPD  +AE+M  A+AA  P  ILVGARGLA ALR   P A   +  L GPL  AVGS DPITL Q+ ALR   P L  + AP+G VP   G  A VTL+++  G ET P + A+RFA  +A ++   GT +++GGATAEA LDA+GI+V+T+ GE LPGLPCCRVG R I++KSGGFG  DTF+RL  MT      G
Sbjct:   45 DILAVSTRSREIPAEQARARVARVLASLPGGIRLFKKVDSRLKGNIAAELSALPDRPLLVAPAIPDFGRIVRAGQVSGFGVDTPIDVAATLGGRP--ATIPDTLTAENMRAALAAAAPGTILVGARGLALALRGDQPPA--PVQHLDGPLTIAVGSTDPITLEQVAALRAARPALVHVMAPAGVVPPPPGSTAPVTLIQMTDGPETPPAQAAQRFAGGLAPWLDRAGTEVITGGATAEAALDAMGIDVMTVAGEILPGLPCCRVGPRSIVTKSGGFGTPDTFLRLAAMTEGARAHG 336          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: A0A316G7X9_9RHOB (Uncharacterized protein YgbK (DUF1537 family) n=1 Tax=Silicimonas algicola TaxID=1826607 RepID=A0A316G7X9_9RHOB)

HSP 1 Score: 261 bits (668), Expect = 1.270e-82
Identity = 153/287 (53.31%), Postives = 193/287 (67.25%), Query Frame = 1
Query:   16 VVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPG-AAPDITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGI-GRDAAVTLLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLL 870
            VV+VSTRSRE+  +EA  RV +VL ++P G RLFKKIDSRLKGN+ASEL AF    M+VAPAIPEFGR+V +G L GFG+  P+ VS  LG  + RA IPD  +A DM   +       +LVGARGLA AL  S+   AAP    LPGP+C A+GS DPITL+Q+  L  H  G+Q + A SG VP    G  A VTLL+IV G +      +RRFA+  A ++    +++VSGGATAEA LDALGI+VL+++GE LPGLP    G R I++KSGGFG  D  +RL+
Sbjct:   47 VVSVSTRSREVHPEEAQRRVAAVLAELPKGLRLFKKIDSRLKGNVASELEAFGDRQMIVAPAIPEFGRIVRNGHLEGFGIDMPLAVSKALGAASDRAAIPDTVTASDMREVLRLAGEGAVLVGARGLASALASSLGVVAAPAPVRLPGPVCIAIGSTDPITLSQVAQLAQHGEGVQHVRAVSGRVPLAPDGALAPVTLLQIVGGRDDDVGTTSRRFAEGAASWLGGARSIIVSGGATAEACLDALGIDVLSLKGEALPGLPVSEGGGRTIVTKSGGFGDVDCLLRLV 333          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: UPI000D37E9FC (four-carbon acid sugar kinase family protein n=1 Tax=Devosia naphthalenivorans TaxID=2082392 RepID=UPI000D37E9FC)

HSP 1 Score: 249 bits (636), Expect = 8.990e-78
Identity = 154/290 (53.10%), Postives = 186/290 (64.14%), Query Frame = 1
Query:   13 DVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSLP--GPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETAPEEV-ARRFAKDVARFVPDRGTLLV-SGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLL 870
            DVV VST SREI+ + A A V  V+ Q+P G  +FKK+DSRLKGNI +EL A      LV PAIP FGRVV +G LTGFGVAHPI ++S LG HA RA +PDV S +D+  AV +   D +LVGARGLA A+  S  G +    +L    P+  A+GS DPITLAQ+ ALR   P +  +DAP+G         A  TLL+  PG E A   V AR  A  V R  P  GTL+V SGGATA+A+L+ALGI  +T+ GE LPGLP  R G   II+KSGGFG  DT VRLL
Sbjct:   46 DVVGVSTDSREIAPEAAHAAVADVVAQLPPGIAIFKKVDSRLKGNIGAELDAIPHERALVVPAIPAFGRVVQNGQLTGFGVAHPIDIASRLGVHADRASVPDVTSQDDIDAAVQSSARD-LLVGARGLAEAVAHSWAGQSQPAPTLDRTAPVILAIGSTDPITLAQVSALRDALPEMDFVDAPNGIAATEARALAPFTLLQATPGHEQASAAVVARNLAASVDRLSPPPGTLMVLSGGATAQAILEALGIGHVTLLGEALPGLPIARAGGFTIITKSGGFGDSDTLVRLL 334          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: UPI001E59326E (four-carbon acid sugar kinase family protein n=1 Tax=Pelagibacterium sp. HS1C4-1 TaxID=2901140 RepID=UPI001E59326E)

HSP 1 Score: 243 bits (619), Expect = 3.470e-75
Identity = 151/291 (51.89%), Postives = 184/291 (63.23%), Query Frame = 1
Query:    7 RPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAP-DITSLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVP-EGIGRDAAVTLLRIVPG-AETAPEEVARRFAKDV-ARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRL 867
            RPDVVAV+T SREI  DEA  RV  VL  +P  ARLFKKIDSRLKGN+ +EL+AF A    V P IPEFGR V+DG LTGFGVA PI+++  LG  A+R+ IPD  SAE M  AV       +LVGARGLA AL  SM GA    +T+L   L   +GS DPITLAQ+D L   H  LQ + AP+G +  +    DA +T+L+ VPG A  A ++VA   A+ +  +        L+SGGATAE VL ALGI VL + GE + GLP  R G   +ISKSGGFGA D    +
Sbjct:   43 RPDVVAVNTASREIPPDEARRRVVRVLDALPQNARLFKKIDSRLKGNLEAELSAFGAVRFAVLPGIPEFGRTVIDGKLTGFGVAEPIEIARKLGAAASRSDIPDTPSAEAMREAVLGRPETAVLVGARGLAAALAQSMTGAVSRQVTNLGRKLVMVIGSRDPITLAQIDVLVQRHADLQYLAAPNGKLATDTTPADARLTILQAVPGEAVAAEQDVALALAQSLNQKCFEGYDGALISGGATAETVLGALGIGVLDVLGEIVDGLPVSRAGGLTVISKSGGFGAADALAEV 333          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: UPI00190723F8 (four-carbon acid sugar kinase family protein n=2 Tax=unclassified Devosia TaxID=196773 RepID=UPI00190723F8)

HSP 1 Score: 237 bits (605), Expect = 4.300e-73
Identity = 143/294 (48.64%), Postives = 186/294 (63.27%), Query Frame = 1
Query:    7 RPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPD-EILVGARGLAHALRVSMPGAAPDITSLP-GPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGA--ETAPEEVARRFAKDVARFVPDRGTLLV-SGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLN 873
            +P V+A+ST SREIS + A +RV  V+  +P G +LFKK+DSRLKGNI +EL+A      ++ PAIP+FGRVV +GC+TGFGVA PI ++ VLG HATRA IPD  S ED+    AALT D ++L+GARGLA+AL  +M   AP     P  P    +GS DPITLAQ++ LR  +  L  I AP+G        +  +T+L+  PGA   T PE VA   A  +     ++  LLV SGGATA+ +L  LG+  L + GE LPGLP  R     ++SKSGGFG  D  VRLL+
Sbjct:   44 QPRVIAISTDSREISPERAQSRVADVIAALPAGIKLFKKVDSRLKGNIEAELSAIPHVRSVLLPAIPDFGRVVENGCVTGFGVATPISIAQVLGSHATRATIPDTASQEDI---EAALTDDYDLLIGARGLANALAKTMSKTAPRAPEYPLHPAYVVIGSTDPITLAQVEHLRSTYSDLTYIGAPNGEAHPCGPAERPLTILQATPGAVHATGPE-VAAALATSLGGLALNQNALLVLSGGATAQTILQGLGLHALELIGEALPGLPISRADGLTVVSKSGGFGDTDALVRLLS 333          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: UPI00155417AE (four-carbon acid sugar kinase family protein n=2 Tax=Devosia TaxID=46913 RepID=UPI00155417AE)

HSP 1 Score: 236 bits (603), Expect = 8.340e-73
Identity = 148/290 (51.03%), Postives = 181/290 (62.41%), Query Frame = 1
Query:   13 DVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGA-APDITSL-PGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETA-PEEVARRFAKDVARFVPDRGTLLV-SGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLL 870
            ++V VST SREI    A A V++ L ++P G  +FKK+DSRLKGNI +EL A      LV PAIP FGR V DG L GFG+A PI V+S LG HA RA IPD  +  D+  A+A    D +LVGARGLA AL  S   A  P + +  P      +GS DPITLAQ++ALR   P L  + AP G  P  +   A +TLL+ +PG E A P  VA   A  +AR  P  GT LV SGGATA A+L+A+GI VL ++GE LPGLP  R G   II+KSGGFG  DT +RLL
Sbjct:   46 EIVGVSTNSREIDPPAATAAVQAALAELPRGLPIFKKVDSRLKGNIPAELDAITYTSALVVPAIPAFGRWVRDGQLGGFGLAEPISVASRLGGHAGRAAIPDAVTQADIAAALACGGHD-LLVGARGLAEALAQSWSTANEPHLAAAAPASTICVIGSTDPITLAQIEALRARRPDLVYLAAPLGIAPAQLPAAAPLTLLQAMPGTEPAEPARVAANLAASLARLAPAPGTRLVLSGGATAHAILEAMGIGVLFLDGEALPGLPLARGGGFTIITKSGGFGDSDTLLRLL 334          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: UPI001981BD27 (four-carbon acid sugar kinase family protein n=1 Tax=Paracoccus salipaludis TaxID=2032623 RepID=UPI001981BD27)

HSP 1 Score: 236 bits (603), Expect = 9.390e-73
Identity = 151/299 (50.50%), Postives = 191/299 (63.88%), Query Frame = 1
Query:    4 ERPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPD-ITSLPGPLC-FAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVTLLRIVPGAETAPE-EVARRFAKDVAR-FVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFV---RLLNMT 879
            E P+VVAVST SREI+  +A A VR  +  +P G  +FKKIDSRLKGN+A+EL+A     MLVAPAIP+FGR+V DG L GFGV  PI V+++LG     A IPD   A  M  A+A  T  ++LVGARGLA AL   +  A P  +  LPGP   F VGS DPIT+ Q+ ALR    G+ + +AP+G V     RDA + +++ VPG    P  EVARR A+ VA      R  LL++GGATA AVLD LG+  L + GE LPGLP CR G   I++KSGGFG+ +T V   RL+N +
Sbjct:   47 EAPEVVAVSTDSREIAPGDAQAAVRVAVAALPPGTPVFKKIDSRLKGNVAAELSALDFRRMLVAPAIPDFGRIVTDGALRGFGVDSPIDVAALLGPRGAGAEIPDTPDAAAMAAALAG-TQADLLVGARGLAEALAARLLPAPPKPVAGLPGPRALFVVGSRDPITMPQVQALRRI--GVALSEAPNGRVEPA--RDADLLVVQAVPGTPPLPPAEVARRLAEGVAPGLTGGRQLLLLTGGATAAAVLDRLGLACLHLLGECLPGLPVCRAGDFTIVTKSGGFGSPETLVTVSRLINQS 340          
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Match: A0A6L5YWW1_9RHOB (Four-carbon acid sugar kinase family protein n=1 Tax=Halovulum marinum TaxID=2662447 RepID=A0A6L5YWW1_9RHOB)

HSP 1 Score: 236 bits (601), Expect = 1.720e-72
Identity = 144/289 (49.83%), Postives = 173/289 (59.86%), Query Frame = 1
Query:   16 VVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNIASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHATRARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDIT---SLPGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSG--TVPEGIGRDAAVTLLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGIEVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRL 867
            VVAVSTRSREISA  A   V  VL  +P   R+ KKIDSRLKGNI +EL AF     LV PAIP+FGRVV DG L GFGVA P+ V   LG  A RA  PD +   D+           +LVGARGLA AL   M  +AP +T   +LP P C AVGS DPITLAQ+  LR   P L  +  PSG    P      A +TLL+        P+ VAR FA+ +A  +     +L++GGATAEA LD LGI +L + GE LPGLP CR G + +++KSGGFG  D  +RL
Sbjct:   49 VVAVSTRSREISAPAAARAVAEVLASLPPDVRVMKKIDSRLKGNIPAELAAFGDRRFLVLPAIPDFGRVVRDGALCGFGVADPVPVRRALGLAADRAHAPDAEVQADIAXXXXXXXXXAVLVGARGLAQALAGLM--SAPPLTVDPALPRPACIAVGSTDPITLAQVARLRAACPDLHHLPCPSGLPAAPTAPPPAAELTLLQATEDGRVPPDRVARAFAETLAPHLRRARGMLLTGGATAEAALDRLGIALLEVRGEALPGLPLCRAGDQVVVTKSGGFGDADALLRL 335          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101571.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A222EA47_9RHOB6.430e-20397.34HPr kinase n=2 Tax=Roseobacteraceae TaxID=2854170 ... [more]
A0A239KPK0_9RHOB9.520e-17386.20Uncharacterized conserved protein YgbK, DUF1537 fa... [more]
A0A0B3RYP8_9RHOB6.280e-9555.74Putative inner membrane protein n=7 Tax=Roseobacte... [more]
A0A316G7X9_9RHOB1.270e-8253.31Uncharacterized protein YgbK (DUF1537 family) n=1 ... [more]
UPI000D37E9FC8.990e-7853.10four-carbon acid sugar kinase family protein n=1 T... [more]
UPI001E59326E3.470e-7551.89four-carbon acid sugar kinase family protein n=1 T... [more]
UPI00190723F84.300e-7348.64four-carbon acid sugar kinase family protein n=2 T... [more]
UPI00155417AE8.340e-7351.03four-carbon acid sugar kinase family protein n=2 T... [more]
UPI001981BD279.390e-7350.50four-carbon acid sugar kinase family protein n=1 T... [more]
A0A6L5YWW1_9RHOB1.720e-7249.83Four-carbon acid sugar kinase family protein n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101571contigL-digitata_M_contig101571:3..908 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1123237.Salmuc_04336
PFAMsDUF1357_C,DUF1537
Model size906
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K22129
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.74e-72
EggNOG OGsCOG3395@1|root,COG3395@2|Bacteria,1RF52@1224|Proteobacteria,2U85J@28211|Alphaproteobacteria
EC2.7.1.219,2.7.1.220
DescriptionProtein conserved in bacteria
Cds size906
COG categoryS
BRITEko00000,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406620.2740743-CDS-L-digitata_M_contig101571:2..9081682406620.2740743-CDS-L-digitata_M_contig101571:2..908Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101571 3..908 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101571.1.1prot_L-digitata_M_contig101571.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101571 3..908 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101571.1.1

>prot_L-digitata_M_contig101571.1.1 ID=prot_L-digitata_M_contig101571.1.1|Name=mRNA_L-digitata_M_contig101571.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=302bp
RERPDVVAVSTRSREISADEALARVRSVLRQMPVGARLFKKIDSRLKGNI
ASELTAFAAAPMLVAPAIPEFGRVVVDGCLTGFGVAHPIKVSSVLGDHAT
RARIPDVQSAEDMLTAVAALTPDEILVGARGLAHALRVSMPGAAPDITSL
PGPLCFAVGSADPITLAQMDALRHHHPGLQVIDAPSGTVPEGIGRDAAVT
LLRIVPGAETAPEEVARRFAKDVARFVPDRGTLLVSGGATAEAVLDALGI
EVLTIEGEGLPGLPCCRVGRRCIISKSGGFGAEDTFVRLLNMTRLQEGRG
S*
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mRNA from alignment at L-digitata_M_contig101571:3..908+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101571.1.1 ID=mRNA_L-digitata_M_contig101571.1.1|Name=mRNA_L-digitata_M_contig101571.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=906bp|location=Sequence derived from alignment at L-digitata_M_contig101571:3..908+ (Laminaria digitata LdigPH10_18mv male)
CGTGAGCGCCCTGATGTTGTCGCTGTCTCGACCCGCTCGCGTGAGATTTC TGCGGATGAGGCGTTGGCGCGTGTGCGTTCCGTCCTGCGGCAGATGCCGG TCGGTGCCCGCCTGTTCAAGAAGATCGACTCGCGCCTGAAGGGCAACATC GCCTCCGAACTGACGGCGTTTGCGGCCGCGCCTATGTTGGTCGCCCCGGC GATCCCCGAATTCGGGCGCGTCGTGGTCGACGGTTGCCTGACCGGTTTTG GCGTCGCGCATCCGATCAAGGTTTCGTCTGTGTTGGGCGATCACGCGACC CGCGCCCGTATCCCCGATGTACAAAGCGCCGAGGACATGCTGACCGCCGT TGCCGCACTGACCCCGGATGAGATCTTGGTCGGCGCGCGCGGGTTGGCCC ATGCGCTGCGCGTCTCTATGCCCGGGGCGGCACCCGACATCACGTCCTTG CCGGGGCCACTGTGTTTTGCGGTGGGGTCAGCAGATCCGATCACCTTGGC GCAGATGGACGCCTTGCGGCACCATCACCCCGGTTTGCAGGTGATCGACG CGCCGTCCGGCACGGTCCCCGAGGGTATCGGCAGGGATGCAGCAGTCACG TTGTTGCGTATCGTCCCGGGCGCGGAAACCGCACCGGAGGAGGTCGCCCG GCGTTTTGCCAAGGATGTGGCGCGGTTTGTACCCGACAGGGGAACCCTGC TGGTGTCTGGCGGTGCAACCGCAGAGGCGGTCCTTGATGCACTGGGGATC GAGGTTTTGACCATCGAAGGAGAGGGGCTGCCGGGTTTGCCTTGCTGTCG GGTCGGGCGTCGCTGCATTATCAGCAAATCCGGTGGTTTTGGTGCCGAGG ATACCTTTGTCCGGTTGCTGAACATGACACGATTGCAGGAGGGCAGGGGA TCATGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig101571:3..908+

>mRNA_L-digitata_M_contig101571.1.1 ID=mRNA_L-digitata_M_contig101571.1.1|Name=mRNA_L-digitata_M_contig101571.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=906bp|location=Sequence derived from alignment at L-digitata_M_contig101571:3..908+ (Laminaria digitata LdigPH10_18mv male)
CGTGAGCGCCCTGATGTTGTCGCTGTCTCGACCCGCTCGCGTGAGATTTC
TGCGGATGAGGCGTTGGCGCGTGTGCGTTCCGTCCTGCGGCAGATGCCGG
TCGGTGCCCGCCTGTTCAAGAAGATCGACTCGCGCCTGAAGGGCAACATC
GCCTCCGAACTGACGGCGTTTGCGGCCGCGCCTATGTTGGTCGCCCCGGC
GATCCCCGAATTCGGGCGCGTCGTGGTCGACGGTTGCCTGACCGGTTTTG
GCGTCGCGCATCCGATCAAGGTTTCGTCTGTGTTGGGCGATCACGCGACC
CGCGCCCGTATCCCCGATGTACAAAGCGCCGAGGACATGCTGACCGCCGT
TGCCGCACTGACCCCGGATGAGATCTTGGTCGGCGCGCGCGGGTTGGCCC
ATGCGCTGCGCGTCTCTATGCCCGGGGCGGCACCCGACATCACGTCCTTG
CCGGGGCCACTGTGTTTTGCGGTGGGGTCAGCAGATCCGATCACCTTGGC
GCAGATGGACGCCTTGCGGCACCATCACCCCGGTTTGCAGGTGATCGACG
CGCCGTCCGGCACGGTCCCCGAGGGTATCGGCAGGGATGCAGCAGTCACG
TTGTTGCGTATCGTCCCGGGCGCGGAAACCGCACCGGAGGAGGTCGCCCG
GCGTTTTGCCAAGGATGTGGCGCGGTTTGTACCCGACAGGGGAACCCTGC
TGGTGTCTGGCGGTGCAACCGCAGAGGCGGTCCTTGATGCACTGGGGATC
GAGGTTTTGACCATCGAAGGAGAGGGGCTGCCGGGTTTGCCTTGCTGTCG
GGTCGGGCGTCGCTGCATTATCAGCAAATCCGGTGGTTTTGGTGCCGAGG
ATACCTTTGTCCGGTTGCTGAACATGACACGATTGCAGGAGGGCAGGGGA
TCATGA
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