mRNA_L-digitata_M_contig101565.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101565.1.1
Unique NamemRNA_L-digitata_M_contig101565.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A059ECL2_9PROT (Flagellar basal body protein n=7 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A059ECL2_9PROT)

HSP 1 Score: 553 bits (1426), Expect = 3.990e-196
Identity = 286/309 (92.56%), Postives = 297/309 (96.12%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSA-GDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLM+LPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGE+YTLPIEYFDNLGRAQTLS+EF+P+VPA+GSSN W+V+IFDSA G+P  SIGDL       A NGGRIDTGGVTASNGATYDDATGTVTL+LPHG+VEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES
Sbjct:   65 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMLLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGEAYTLPIEYFDNLGRAQTLSIEFTPSVPATGSSNDWTVQIFDSANGNPLTSIGDLAISFADSAANGGRIDTGGVTASNGATYDDATGTVTLSLPHGNVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 373          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A062U7U1_9PROT (Flagellar basal body protein n=4 Tax=Hyphomonas TaxID=85 RepID=A0A062U7U1_9PROT)

HSP 1 Score: 493 bits (1268), Expect = 2.620e-172
Identity = 249/308 (80.84%), Postives = 276/308 (89.61%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDI+ATGSL+STGNATD+AVSGRGLVPVTD  G+N+LSSER LM+LPTGSFYADE+GNLRTQSGLFLLGWPANSDGEIGNVSRNSGT LEPVNI+ASQYTASPTS I+LGINLPADATT  G GESY LPIEYFDNLGRAQTLS +F+PNVPA+G+SN WSVE+FDSAGDP  S+GDL         NGGRIDT  VTAS G +YD A+G V++ LPHG+V+VFIGRP+DSAGITQLSA FSPT+VSKDGAPIGDLQSVEIDE GYLQA+YNTGFRRTLYQIPVGDVPNMNGL+ALDGQA+ VS+ES
Sbjct:   54 FKDISATGSLVSTGNATDIAVSGRGLVPVTDGAGINALSSERGLMLLPTGSFYADENGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTSLEPVNISASQYTASPTSSIDLGINLPADATTEDGNGESYMLPIEYFDNLGRAQTLSFKFTPNVPATGASNNWSVEVFDSAGDPLTSLGDLDITFADSPTNGGRIDT--VTASGGVSYDAASGVVSMTLPHGNVDVFIGRPSDSAGITQLSAPFSPTNVSKDGAPIGDLQSVEIDEKGYLQAVYNTGFRRTLYQIPVGDVPNMNGLQALDGQAYSVSSES 359          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A399R5J5_9PROT (Flagellar basal body protein n=1 Tax=Henriciella mobilis TaxID=2305467 RepID=A0A399R5J5_9PROT)

HSP 1 Score: 469 bits (1208), Expect = 5.050e-163
Identity = 238/308 (77.27%), Postives = 270/308 (87.66%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATGSLISTGNATDLAV+GRGL+PVTD  GV++++SER++MM PTGSFYAD++GNLRTQSGLFLLGWPAN+DGEIGNVSRNSG DL PVNIAASQYTASPT+ IELGINLPADAT + GTG S+ LPIEYFDNLGRAQTL+LEF+P +PASG SN+W+VE+FDSAGDP  SIG +         NGGRI +   TA+ G +YD +TG + L+LPHG V VFIGRPNDS GITQLSA FSPT+V+KDGAPIGDLQSVE+DENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALD QA++VSAES
Sbjct:   65 FKDIAATGSLISTGNATDLAVAGRGLLPVTDQVGVSAIASERNMMMTPTGSFYADQNGNLRTQSGLFLLGWPANTDGEIGNVSRNSGIDLAPVNIAASQYTASPTTSIELGINLPADATESIGTGNSFPLPIEYFDNLGRAQTLTLEFTPVIPASGHSNSWTVEVFDSAGDPNTSIGGMDITFADTPTNGGRILS--ATANGGISYDSSTGEIALSLPHGPVNVFIGRPNDSVGITQLSAPFSPTAVTKDGAPIGDLQSVEVDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDSQAYQVSAES 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: UPI000A028521 (flagellar hook-basal body complex protein n=1 Tax=Henriciella aquimarina TaxID=545261 RepID=UPI000A028521)

HSP 1 Score: 469 bits (1207), Expect = 7.170e-163
Identity = 236/308 (76.62%), Postives = 271/308 (87.99%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDI+ATGSLISTGNATD+AVSGRGL+PVTD TGV SL+SERSLM+ PTGSFYAD++GNLRTQSGLFLLGWPA +DGEIGNVSRNSG +LEPVNI+ASQYTASPT  I+LGINLP DAT AG  G+SY LPIEYFDNLGRAQTL+LEF+P+VP SG SN W+V+ FDSAG+PA SIGDL         NGGRI +  V A+NGA+YD + G VTLN+PHG +E++IGRPNDS+GITQLSA FSPT+V+K+GAPIGDLQSVEID++GYL+AIYNTGFRRTLYQIPVGDVPNMNGLK+LD QA+ VSAES
Sbjct:   65 FKDISATGSLISTGNATDMAVSGRGLLPVTDGTGVGSLASERSLMLTPTGSFYADQNGNLRTQSGLFLLGWPATTDGEIGNVSRNSGINLEPVNISASQYTASPTESIDLGINLPVDATEAGAPGDSYPLPIEYFDNLGRAQTLTLEFTPSVPGSGYSNEWTVQAFDSAGNPAASIGDLDITFDDSPANGGRIQS--VNATNGASYDSSNGRVTLNMPHGPIEIYIGRPNDSSGITQLSAPFSPTAVTKNGAPIGDLQSVEIDDDGYLKAIYNTGFRRTLYQIPVGDVPNMNGLKSLDSQAYSVSAES 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: UPI000BA6344A (flagellar hook-basal body complex protein n=1 Tax=Henriciella pelagia TaxID=1977912 RepID=UPI000BA6344A)

HSP 1 Score: 462 bits (1188), Expect = 5.520e-160
Identity = 236/308 (76.62%), Postives = 268/308 (87.01%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATGSLISTGNATD+AV+GRGL+PVTD +G+ +L+SER LM+ PTGSFYAD +GNLRTQSGL+LLG+PA+ DG +GNVSRNSG  LEPVNI+ASQYTASPT +IELGINLP DAT + GTG+ Y LPIEYFDNLGRA TL+LEFSP +P SG SN W+VEIFDSAG+PA SIGDL         NGGRI +  VTA+NGATY+ ATG VTLNLPHG+V++FIGRP DSAGITQLSA FSPT+V+KDGAPIGDLQSVEIDE+G+LQAIYNTGFRRTLYQIPVGDVPN NGLKALD QA+ VSAES
Sbjct:   65 FKDIAATGSLISTGNATDMAVAGRGLLPVTDGSGIGALASERELMLTPTGSFYADSNGNLRTQSGLYLLGFPADGDGNVGNVSRNSGISLEPVNISASQYTASPTEQIELGINLPVDATESDGTGDIYPLPIEYFDNLGRAHTLTLEFSPVIPGSGYSNNWTVEIFDSAGNPAASIGDLDITFDDTTANGGRIAS--VTATNGATYNAATGQVTLNLPHGNVDLFIGRPGDSAGITQLSAPFSPTAVAKDGAPIGDLQSVEIDESGFLQAIYNTGFRRTLYQIPVGDVPNANGLKALDAQAYAVSAES 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: UPI001C8176A5 (flagellar hook-basal body complex protein n=1 Tax=Hyphomonas sp. WL0036 TaxID=2866160 RepID=UPI001C8176A5)

HSP 1 Score: 445 bits (1144), Expect = 2.660e-153
Identity = 221/308 (71.75%), Postives = 262/308 (85.06%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            +KDIAATGSL+ TG+ATD+AVSGRGL+PVTDN+G+ SLSSER +M+  TGSFY D++G LRTQSGLFLLGWPA+++G IGNVSRNSG +LEPVNIA SQ+TASPT+ IELGINLPADAT AGG G+ Y LP+EYFDNLGRAQTL+LEF+P VP SGSSN W+V  FDSAG+PA S+GDL       A+NGGRI T   TA+ G TYD  TG +++NL HG VE+FIGRPNDSAG+TQL+ ++SPT+V+KDGAP+GDLQSVEID NGYLQA+Y+TG RRTLYQIPVGDVPNMNGL +LD QA+ VSA S
Sbjct:   65 YKDIAATGSLVRTGSATDIAVSGRGLIPVTDNSGIGSLSSERQMMLTSTGSFYPDQNGYLRTQSGLFLLGWPADANGSIGNVSRNSGLNLEPVNIATSQFTASPTTSIELGINLPADATNAGGPGDPYLLPVEYFDNLGRAQTLTLEFTPVVPGSGSSNEWNVRFFDSAGNPATSLGDLNLVFDDTALNGGRIST--ATAAGGVTYDAPTGRLSMNLEHGPVEIFIGRPNDSAGMTQLAGSYSPTAVTKDGAPLGDLQSVEIDANGYLQAVYDTGLRRTLYQIPVGDVPNMNGLNSLDSQAYSVSASS 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A069E5N5_9PROT (Flagellar hook protein FlgE n=10 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A069E5N5_9PROT)

HSP 1 Score: 441 bits (1135), Expect = 6.180e-152
Identity = 221/308 (71.75%), Postives = 262/308 (85.06%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATG L STGNATD+AV+ RGL+PVT+  G+ ++ SERSLM+LPTGSFY D++G LRTQSG+FLLGWPA+S G+IGNVSRNSG +LEPVNIA SQ+TASPT+ +ELGINLPADATT GG+GE Y+LPIEYFDNLGRAQT+++EF+PNVPASGSSN W V+ FDSAGDP  S+GDL       A NGGRI +   TAS G +YD ATG +++ L HG ++VFIGRP+DSAGITQL+  +SPT+V+KDGAP+GDL SVEIDENGYLQAIY+TG RRTLYQIPVGDVPNMNGL ALDGQA+ VS+ S
Sbjct:   65 FKDIAATGPLTSTGNATDIAVTERGLLPVTNEGGIGAVPSERSLMLLPTGSFYPDQNGYLRTQSGMFLLGWPADSSGDIGNVSRNSGLNLEPVNIATSQFTASPTTSMELGINLPADATTTGGSGEPYSLPIEYFDNLGRAQTMTMEFTPNVPASGSSNEWDVQFFDSAGDPVTSLGDLNLVFDDTASNGGRIAS--ATASGGVSYDAATGKLSMTLEHGPIDVFIGRPDDSAGITQLAGPYSPTAVTKDGAPLGDLASVEIDENGYLQAIYDTGLRRTLYQIPVGDVPNMNGLTALDGQAYSVSSSS 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A0F2R7D0_9PROT (Flagellar hook protein FlgE n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2R7D0_9PROT)

HSP 1 Score: 441 bits (1134), Expect = 8.770e-152
Identity = 223/308 (72.40%), Postives = 259/308 (84.09%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATGSLI TG+ATD+AV+GRGL PVT  +G+++  S+R +M+LPTGSFY D++GNLRTQSGLFLLGWPANS G+IGNVSRNSG +LEPVNIA SQYTA+PTS I+LGINLPADAT AG    SY LP+EYFDNLGRA +L+ EF+P VPASG+SN W+V+I+DSAGDPAVSIG +       A +GGRI     TAS GATYD ATG V+L LPHG V V+IGRPNDSAG+TQL+A FSPT+V+KDGAPIGDL SVEIDENG+LQA+Y TG RRTLYQIPVGDVPNMNGL+A+D QAF VSA S
Sbjct:   65 FKDIAATGSLIDTGSATDIAVAGRGLFPVTSESGLSATPSDREMMLLPTGSFYPDQNGNLRTQSGLFLLGWPANSSGDIGNVSRNSGVNLEPVNIATSQYTATPTSSIDLGINLPADATIAGSATGSYNLPVEYFDNLGRANSLTFEFTPTVPASGASNQWTVQIYDSAGDPAVSIGTVDLEFSDAAASGGRILAS--TASAGATYDPATGNVSLTLPHGPVSVYIGRPNDSAGVTQLAAPFSPTAVTKDGAPIGDLSSVEIDENGFLQAVYGTGLRRTLYQIPVGDVPNMNGLRAMDSQAFAVSASS 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A062VGH3_9PROT (Flagellar basal body protein n=8 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A062VGH3_9PROT)

HSP 1 Score: 439 bits (1130), Expect = 3.550e-151
Identity = 223/308 (72.40%), Postives = 263/308 (85.39%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            +KDI+ATGSLI TG+ATD+AVSGRGL+PVTD  G+NSL+S R+LM+ PTGSFYADE+G LRTQSGLFLLGWPA+S GE+GNVSRNSG +L PVNIA SQ+ A+PTS IELGIN+PADATTAG + + Y LP+EYFDNLGRAQT++ +F+PNVPASGSSN W+V+IFDSAG+PA SIGDL          GGRI     TASNGA YD ATG V++NL HG VEVFIGRPNDSAGITQL+A+F+PT+V+K+G+PIGDLQS+EIDE G+LQAIY+ GFRRTLYQIPVGDVPNMNGL+ALD QA+ VS  S
Sbjct:   65 YKDISATGSLIRTGSATDVAVSGRGLLPVTDIGGINSLASNRNLMLTPTGSFYADENGFLRTQSGLFLLGWPADSAGEVGNVSRNSGVNLVPVNIATSQFNATPTSSIELGINIPADATTAGASSDPYLLPVEYFDNLGRAQTVTFQFTPNVPASGSSNEWTVQIFDSAGNPATSIGDLDLTFNDTPSAGGRIAA--ATASNGAIYDPATGRVSINLDHGPVEVFIGRPNDSAGITQLAASFAPTAVTKNGSPIGDLQSIEIDEQGFLQAIYDKGFRRTLYQIPVGDVPNMNGLRALDSQAYSVSNSS 370          
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Match: A0A350ZVF3_9PROT (Flagellar hook protein FlgE n=1 Tax=Hyphomonas sp. TaxID=87 RepID=A0A350ZVF3_9PROT)

HSP 1 Score: 436 bits (1121), Expect = 8.250e-150
Identity = 219/308 (71.10%), Postives = 262/308 (85.06%), Query Frame = 1
Query:    1 FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTGSFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQYTASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSPNVPASGSSNAWSVEIFDSAGDPAVSIGDLXXXXXXXAVNGGRIDTGGVTASNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKDGAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQAFRVSAES 924
            FKDIAATGSLISTGNATD+AV+GRGL PVTDN G++  ++ER+LM+ PTGSFYAD++GNLRTQSGLFLLGWPA+S GEIGNVSRNSG  L+PVNIA SQY A+PTSR++LGIN+PADAT +  T ++YTLP+EYFDNLGRA  L+ EF+P +P SG+SN W V+IFD AG+P  SIGDL       +  GGRI T   +ASNGA+YD ATG V+++L HG V+VFIGRP+DS+GITQL+A F+PT+V+KDGAPIGDLQ+VEIDE G+LQAIY+TGFRRTLYQIPVGDVPNMNGL+ALD QAF VSA S
Sbjct:   65 FKDIAATGSLISTGNATDIAVAGRGLFPVTDNGGLSLSAAERNLMLAPTGSFYADQNGNLRTQSGLFLLGWPADSAGEIGNVSRNSGVSLQPVNIATSQYIATPTSRVDLGINIPADATRSTATAQTYTLPVEYFDNLGRAHVLTFEFTPVIPGSGASNQWDVQIFDGAGNPTTSIGDLSLEFLDTSSAGGRIGT--ASASNGASYDPATGMVSISLVHGPVDVFIGRPSDSSGITQLAAPFAPTAVTKDGAPIGDLQAVEIDEKGFLQAIYDTGFRRTLYQIPVGDVPNMNGLRALDAQAFSVSASS 370          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101565.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059ECL2_9PROT3.990e-19692.56Flagellar basal body protein n=7 Tax=Hyphomonadace... [more]
A0A062U7U1_9PROT2.620e-17280.84Flagellar basal body protein n=4 Tax=Hyphomonas Ta... [more]
A0A399R5J5_9PROT5.050e-16377.27Flagellar basal body protein n=1 Tax=Henriciella m... [more]
UPI000A0285217.170e-16376.62flagellar hook-basal body complex protein n=1 Tax=... [more]
UPI000BA6344A5.520e-16076.62flagellar hook-basal body complex protein n=1 Tax=... [more]
UPI001C8176A52.660e-15371.75flagellar hook-basal body complex protein n=1 Tax=... [more]
A0A069E5N5_9PROT6.180e-15271.75Flagellar hook protein FlgE n=10 Tax=Hyphomonadace... [more]
A0A0F2R7D0_9PROT8.770e-15272.40Flagellar hook protein FlgE n=1 Tax=Hyphomonas sp.... [more]
A0A062VGH3_9PROT3.550e-15172.40Flagellar basal body protein n=8 Tax=Alphaproteoba... [more]
A0A350ZVF3_9PROT8.250e-15071.10Flagellar hook protein FlgE n=1 Tax=Hyphomonas sp.... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101565contigL-digitata_M_contig101565:1..924 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1207058.L53_08045
Preferred nameflgE
PFAMsFlaE,Flg_bb_rod,Flg_bbr_C
Model size924
Max annot lvl28211|Alphaproteobacteria
KEGG koko:K02390
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.04e-202
EggNOG OGsCOG1749@1|root,COG1749@2|Bacteria,1MU5J@1224|Proteobacteria,2TSF2@28211|Alphaproteobacteria,43XST@69657|Hyphomonadaceae
DescriptionFlagellar hook protein FlgE
Cds size924
COG categoryN
BRITEko00000,ko00001,ko02035
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406620.2442873-CDS-L-digitata_M_contig101565:0..9241682406620.2442873-CDS-L-digitata_M_contig101565:0..924Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101565 1..924 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101565.1.1prot_L-digitata_M_contig101565.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101565 1..924 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101565.1.1

>prot_L-digitata_M_contig101565.1.1 ID=prot_L-digitata_M_contig101565.1.1|Name=mRNA_L-digitata_M_contig101565.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=308bp
FKDIAATGSLISTGNATDLAVSGRGLVPVTDNTGVNSLSSERSLMMLPTG
SFYADESGNLRTQSGLFLLGWPANSDGEIGNVSRNSGTDLEPVNIAASQY
TASPTSRIELGINLPADATTAGGTGESYTLPIEYFDNLGRAQTLSLEFSP
NVPASGSSNAWSVEIFDSAGDPAVSIGDLAINFSDSAVNGGRIDTGGVTA
SNGATYDDATGTVTLNLPHGDVEVFIGRPNDSAGITQLSANFSPTSVSKD
GAPIGDLQSVEIDENGYLQAIYNTGFRRTLYQIPVGDVPNMNGLKALDGQ
AFRVSAES
back to top

mRNA from alignment at L-digitata_M_contig101565:1..924+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101565.1.1 ID=mRNA_L-digitata_M_contig101565.1.1|Name=mRNA_L-digitata_M_contig101565.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=924bp|location=Sequence derived from alignment at L-digitata_M_contig101565:1..924+ (Laminaria digitata LdigPH10_18mv male)
TTCAAGGACATCGCCGCAACAGGATCGCTCATCTCTACCGGCAACGCAAC TGATCTTGCGGTCTCTGGCCGTGGCCTAGTTCCGGTTACGGATAATACGG GCGTAAACTCGCTCTCGTCCGAACGTAGCTTGATGATGCTGCCAACGGGT TCATTCTACGCGGACGAAAGCGGAAACCTCCGAACTCAGAGCGGCCTCTT CCTGCTTGGTTGGCCTGCAAACTCCGATGGAGAAATCGGCAATGTCAGCC GTAATAGCGGTACCGACCTCGAGCCAGTCAACATTGCGGCATCCCAGTAT ACTGCTTCCCCAACATCCCGCATCGAACTCGGCATCAATCTGCCGGCCGA TGCCACCACAGCTGGTGGGACGGGTGAAAGCTACACTCTGCCGATAGAGT ATTTCGACAATCTGGGCCGCGCCCAAACACTGTCTTTGGAATTCAGCCCT AACGTTCCCGCATCAGGCTCAAGCAACGCCTGGTCTGTGGAGATATTCGA TAGCGCTGGGGACCCAGCCGTTTCGATTGGCGATCTTGCCATCAACTTCT CCGACAGCGCCGTAAATGGCGGTCGTATCGACACTGGCGGCGTGACTGCT TCCAATGGTGCGACGTATGATGATGCGACCGGCACCGTGACGCTAAATCT GCCCCACGGTGACGTCGAGGTGTTCATAGGTCGACCGAATGACAGCGCTG GTATTACTCAGCTCTCCGCCAATTTCTCACCAACTTCGGTTAGTAAGGAC GGAGCGCCTATTGGTGACCTCCAGTCCGTGGAGATTGACGAGAACGGCTA TCTGCAAGCCATCTATAATACCGGCTTCCGCCGGACCCTCTACCAGATTC CGGTTGGTGATGTTCCGAATATGAACGGACTGAAGGCATTGGACGGTCAG GCCTTTCGTGTTTCTGCGGAAAGC
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig101565:1..924+

>mRNA_L-digitata_M_contig101565.1.1 ID=mRNA_L-digitata_M_contig101565.1.1|Name=mRNA_L-digitata_M_contig101565.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=924bp|location=Sequence derived from alignment at L-digitata_M_contig101565:1..924+ (Laminaria digitata LdigPH10_18mv male)
TTCAAGGACATCGCCGCAACAGGATCGCTCATCTCTACCGGCAACGCAAC
TGATCTTGCGGTCTCTGGCCGTGGCCTAGTTCCGGTTACGGATAATACGG
GCGTAAACTCGCTCTCGTCCGAACGTAGCTTGATGATGCTGCCAACGGGT
TCATTCTACGCGGACGAAAGCGGAAACCTCCGAACTCAGAGCGGCCTCTT
CCTGCTTGGTTGGCCTGCAAACTCCGATGGAGAAATCGGCAATGTCAGCC
GTAATAGCGGTACCGACCTCGAGCCAGTCAACATTGCGGCATCCCAGTAT
ACTGCTTCCCCAACATCCCGCATCGAACTCGGCATCAATCTGCCGGCCGA
TGCCACCACAGCTGGTGGGACGGGTGAAAGCTACACTCTGCCGATAGAGT
ATTTCGACAATCTGGGCCGCGCCCAAACACTGTCTTTGGAATTCAGCCCT
AACGTTCCCGCATCAGGCTCAAGCAACGCCTGGTCTGTGGAGATATTCGA
TAGCGCTGGGGACCCAGCCGTTTCGATTGGCGATCTTGCCATCAACTTCT
CCGACAGCGCCGTAAATGGCGGTCGTATCGACACTGGCGGCGTGACTGCT
TCCAATGGTGCGACGTATGATGATGCGACCGGCACCGTGACGCTAAATCT
GCCCCACGGTGACGTCGAGGTGTTCATAGGTCGACCGAATGACAGCGCTG
GTATTACTCAGCTCTCCGCCAATTTCTCACCAACTTCGGTTAGTAAGGAC
GGAGCGCCTATTGGTGACCTCCAGTCCGTGGAGATTGACGAGAACGGCTA
TCTGCAAGCCATCTATAATACCGGCTTCCGCCGGACCCTCTACCAGATTC
CGGTTGGTGATGTTCCGAATATGAACGGACTGAAGGCATTGGACGGTCAG
GCCTTTCGTGTTTCTGCGGAAAGC
back to top