mRNA_L-digitata_M_contig101559.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: UPI001269C9D8 (SRPBCC family protein n=1 Tax=Pelagihabitans pacificus TaxID=2696054 RepID=UPI001269C9D8) HSP 1 Score: 54.3 bits (129), Expect = 8.970e-8 Identity = 24/30 (80.00%), Postives = 27/30 (90.00%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYAK 90
DYFIAIEHH KTG++VTK+NFK IKK YAK
Sbjct: 165 DYFIAIEHHAKTGERVTKENFKAIKKQYAK 194
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A316KWF8_9FLAO (Uncharacterized protein n=2 Tax=Muricauda koreensis TaxID=2201895 RepID=A0A316KWF8_9FLAO) HSP 1 Score: 54.3 bits (129), Expect = 1.460e-7 Identity = 22/29 (75.86%), Postives = 28/29 (96.55%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYA 87
DYFIAIEHH KTG+KVTK+NF+++KKLY+
Sbjct: 227 DYFIAIEHHAKTGEKVTKENFRKVKKLYS 255
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A4Q8QHV2_9FLAO (SRPBCC family protein n=1 Tax=Muricauda hymeniacidonis TaxID=2517819 RepID=A0A4Q8QHV2_9FLAO) HSP 1 Score: 53.5 bits (127), Expect = 1.730e-7 Identity = 22/29 (75.86%), Postives = 28/29 (96.55%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYA 87
DYFI+IEHH KTG+KVTK+NF++IKKLY+
Sbjct: 165 DYFISIEHHAKTGEKVTKENFRKIKKLYS 193
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A1E5SKA2_9BACT (Uncharacterized protein n=2 Tax=Roseivirga misakiensis TaxID=1563681 RepID=A0A1E5SKA2_9BACT) HSP 1 Score: 52.4 bits (124), Expect = 4.760e-7 Identity = 23/32 (71.88%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYAKRD 96
DYFIAIEHH++TG+KVTK NFK+IKK KR+
Sbjct: 157 DYFIAIEHHLRTGEKVTKTNFKQIKKEIKKRE 188
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A1E5SWL5_9BACT (Uncharacterized protein n=1 Tax=Roseivirga sp. 4D4 TaxID=1889784 RepID=A0A1E5SWL5_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 9.180e-7 Identity = 23/35 (65.71%), Postives = 28/35 (80.00%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYAKRDTAA 105
DYFIAIEHH+ TG+KVTK NFK+IKK R+ +A
Sbjct: 156 DYFIAIEHHLSTGEKVTKTNFKQIKKQIKSRERSA 190
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A6L9E8Y7_9FLAO (Uncharacterized protein n=1 Tax=Poritiphilus flavus TaxID=2697053 RepID=A0A6L9E8Y7_9FLAO) HSP 1 Score: 50.8 bits (120), Expect = 1.780e-6 Identity = 20/29 (68.97%), Postives = 27/29 (93.10%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYA 87
DYFIA+EHH KTG+KVTK+NF++I+K Y+
Sbjct: 165 DYFIAVEHHAKTGEKVTKENFRKIRKKYS 193
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A6N6KM84_9BACT (SRPBCC family protein n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A6N6KM84_9BACT) HSP 1 Score: 50.4 bits (119), Expect = 2.610e-6 Identity = 21/31 (67.74%), Postives = 26/31 (83.87%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYAKR 93
DYFIAIEHH+ TG+ VTK+NFK +K+ YA R
Sbjct: 168 DYFIAIEHHLSTGEDVTKENFKSVKRQYATR 198
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A315ZBN0_9BACT (Polyketide cyclase/dehydrase/lipid transport protein n=1 Tax=Sediminitomix flava TaxID=379075 RepID=A0A315ZBN0_9BACT) HSP 1 Score: 48.9 bits (115), Expect = 1.050e-5 Identity = 21/26 (80.77%), Postives = 25/26 (96.15%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKK 78
DYFIA+E+HIKTG+KVTK+NFK IKK
Sbjct: 164 DYFIALEYHIKTGEKVTKENFKSIKK 189
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: A0A7H5EXH5_9BACT (Uncharacterized protein n=2 Tax=Lewinella sp. W8 TaxID=2528208 RepID=A0A7H5EXH5_9BACT) HSP 1 Score: 47.8 bits (112), Expect = 2.630e-5 Identity = 19/31 (61.29%), Postives = 28/31 (90.32%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKKLYAKR 93
DY IAIEH++ TG+ VTK+NF++IKK+YA++
Sbjct: 167 DYAIAIEHYVNTGEAVTKENFRQIKKVYARK 197
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Match: UPI001ABC8047 (SRPBCC family protein n=1 Tax=Roseivirga sp. E12 TaxID=2819237 RepID=UPI001ABC8047) HSP 1 Score: 47.4 bits (111), Expect = 3.110e-5 Identity = 19/26 (73.08%), Postives = 25/26 (96.15%), Query Frame = 1
Query: 1 DYFIAIEHHIKTGDKVTKDNFKEIKK 78
DYFIAIEHH++T +KVTK+NFK++KK
Sbjct: 142 DYFIAIEHHLRTDEKVTKNNFKQVKK 167 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101559.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101559.1.1 >prot_L-digitata_M_contig101559.1.1 ID=prot_L-digitata_M_contig101559.1.1|Name=mRNA_L-digitata_M_contig101559.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=37bp DYFIAIEHHIKTGDKVTKDNFKEIKKLYAKRDTAAKNback to top mRNA from alignment at L-digitata_M_contig101559:3..113+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101559.1.1 ID=mRNA_L-digitata_M_contig101559.1.1|Name=mRNA_L-digitata_M_contig101559.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=111bp|location=Sequence derived from alignment at L-digitata_M_contig101559:3..113+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101559:3..113+ >mRNA_L-digitata_M_contig101559.1.1 ID=mRNA_L-digitata_M_contig101559.1.1|Name=mRNA_L-digitata_M_contig101559.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=111bp|location=Sequence derived from alignment at L-digitata_M_contig101559:3..113+ (Laminaria digitata LdigPH10_18mv male)back to top |