mRNA_L-digitata_M_contig101515.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A7V1EA37_9SPIR (Condensation domain-containing protein n=2 Tax=root TaxID=1 RepID=A0A7V1EA37_9SPIR) HSP 1 Score: 158 bits (399), Expect = 2.210e-41 Identity = 101/293 (34.47%), Postives = 165/293 (56.31%), Query Frame = 1
Query: 10 PLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPA---ALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLF--ASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSK----ALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVS 861
PLAR + H +T++LT HH IGDG +GA++MRDL + A+ + +S P LP R ++ A+ P + R + +F R+ LS M R G P PL D ++ R+ C++ + L A ++ +R +TT+HGAL A+ +LA E G + F SPVN+R ++PP+EDD+GLF+++G ++++ + DFW+LARE RQ L ++ G F + M + A ++ + + A + + ++ L G+ +NIGR DIA+ + + +E LGFA S
Sbjct: 125 PLARCVLIRHGDTKTTVLLTVHHSIGDGKAGAFLMRDLFRA-ASKVQKGESAGLPGLPPRMDMTAYFPGWAKGISGRLRYIRFGLRV---LSAMVRWGAPAMPLVDR-KAPVRMRRACIVAKTLNAATVAKLHKRARIEKTTLHGALIASQILAVVHERGSAKELAFIIGSPVNLRARLDPPVEDDLGLFITVGISINRAG-FSTDFWQLAREVRQSLLECVERGDPFVYVMMHNDLSAVAGLFGSGGVGARVYTAIAGKLHLGGLAFSNIGRVDIAADHDSFVVESLGFAAS 411
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A6L4YKV0_9RHOO (Condensation domain-containing protein n=1 Tax=Rhodocyclaceae bacterium TaxID=1898103 RepID=A0A6L4YKV0_9RHOO) HSP 1 Score: 147 bits (370), Expect = 2.390e-37 Identity = 100/291 (34.36%), Postives = 151/291 (51.89%), Query Frame = 1
Query: 10 PLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPML-FASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPAS-----WFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVSL 864
P+ R W+ H H+T+ TFHH+IGDGISG+ + RDL++++ + ILP+ ++ H+PA + G LS + RHG P L + +S G R+ V EP + D +R QTT+HGAL+AAI++A+S E G P + F+S +N+R+ PPI DD+GL+ ++ + H V G FW LARE +Q L I G F + ++ +++ R AK+ R + LTNIG+ IA+ G + + LGF VSL
Sbjct: 109 PMVRCVWIRHDLAHATLFATFHHLIGDGISGSLLYRDLMQALRGE-------DLDILPLAESMDGHMPATARGLKGFAGLVKLAGRRLSRILRHG-PLRFLPVERPASFGERRAAVRMLRFEPEFVCALSDRARREQTTLHGALAAAIVIASSPEIGAPPAHIAFSSALNMRDRFSPPIGDDLGLYATLAYSTHVVGDGTA-FWPLARELKQGLNEAIASGQPFLGVTGIARWIMYRYRKAGGGETGRQTAAKVFSRGMIKAFALTNIGKVAIATDNGPIRVASLGFVVSL 390
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A5C6A3H2_9BACT (Chondramide synthase cmdD n=1 Tax=Stieleria varia TaxID=2528005 RepID=A0A5C6A3H2_9BACT) HSP 1 Score: 134 bits (338), Expect = 1.100e-32 Identity = 96/288 (33.33%), Postives = 147/288 (51.04%), Query Frame = 1
Query: 10 PLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVS-RGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLFASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKAL-VWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVSLG 867
PL R H D S +++TF H++GDG+SG Y++RDLL+ I + L ++ +PAA++ G R+ G + + R+G P+ D +++ R VI + + + + SR QTTVHGALSAAI+L + GK + PVNVR+++ P + +DVG+F S+ +VDPG + FW+LAR R +L++ ID G + M + LP A+ +R GLTN+GR D++ G L + L FAVS G
Sbjct: 118 PLFRCVLADHGNDESHLLITFDHVVGDGMSGMYLLRDLLQHIQTPQSDGFGPVKQRLADTTAMDERLPAAVLGGAGSLRRAKLVAGVVFENL-RYGAVS-PIPMDQQAALNQRHTKVISQEFDESFVASLAKRSRQEQTTVHGALSAAIVLGVVHDAGKSLSIKHRCPVNVRDSLVPAVGEDVGMFASMVLFRGRVDPG-EPFWDLARRIRGQLKSSIDRGQPAVMASMLPRLYQTIGGDKLPLETLAERWQRHTRSTSGLTNVGRLDLSIGDGPLQLRALTFAVSPG 402
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: UPI000498488B (condensation domain-containing protein n=2 Tax=Nostocales TaxID=1161 RepID=UPI000498488B) HSP 1 Score: 110 bits (276), Expect = 4.160e-24 Identity = 85/286 (29.72%), Postives = 146/286 (51.05%), Query Frame = 1
Query: 1 SHAPLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFER--PILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLFA--SPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERL 846
S PL R L+H+PD S +++TFHH IGDG+SGAYV+RD+L+ I G DS P LP EI V V + A ++L+ +R+ + + P + + L A+T ++V R T+VHGAL AA +LA + E ++ SP+N+R ++ P+ +++G +++ T H++ DFW+LARE + +L + DG F + ++++AL+ + + R++ + +TN+G +I +G L ++ L
Sbjct: 102 SEEPLLRV-LLLHSPDISNLIITFHHCIGDGLSGAYVIRDILQFI----GEPDSPRELLPDLPPVDEIIPDVTKNWVEEDLENSIEAE--SILTATYRNNQDRNTSEIFP--------IRLFNWTLSSAKTTKLVARCRVENTSVHGALCAAFLLAIAAEVKSSNDIILKCHSPINIRNYLKIPVNENLGEYITRPVTDHRLSQNT-DFWDLAREVKYKLNQVVADGKLFDDV-LKARALL--SSISNKGGETSDARKIGRIDIAITNLGNLNIKQQFGNLQLQEL 368
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A4Q9J2X5_9CYAN (Condensation domain-containing protein n=1 Tax=Westiellopsis prolifica IICB1 TaxID=1970206 RepID=A0A4Q9J2X5_9CYAN) HSP 1 Score: 110 bits (274), Expect = 1.010e-23 Identity = 89/294 (30.27%), Postives = 141/294 (47.96%), Query Frame = 1
Query: 10 PLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPI-LPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKV-------CVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKP--TPMLFASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVS 861
PL R WL H +++T HH+I DG SG Y++RDLL SI A + + I LP R I+ +PA+ F+ +L + + LA P++ A + V CVI R+L T+ + R +T+VH L A +M A++++ K + S +N+R + PPI+D++G + S+ +T HQ+ W LARE + L ++ G L +Q L + R A+ V +V G++N+G +I YG+L I +L F VS
Sbjct: 103 PLVRVVWLRSEKVH-ILLITLHHVISDGKSGVYLVRDLL-SITAELLSRGVIKSHIPLPERPSIDEIIPAS----------FSGFKGVLGMLKTGLRQNLMLAKQPQTFAIEKDVPLQQIRRCVIHRILSEETTRLLTVRCRQEKTSVHAILCAIMMKASAQKINKQKIVRLCCLSAINLRHLLTPPIKDEIGFYASVLSTFHQLGVETSP-WNLAREVKTNLSNLLEQGQVLATLMLQKNILSF--RCPSPIKMAQEVNQVFRATTGVSNLGLIEIPENYGSLVIRKLHFCVS 381
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A8J7XX71_9EURY (Condensation domain-containing protein n=1 Tax=Theionarchaea archaeon TaxID=2747605 RepID=A0A8J7XX71_9EURY) HSP 1 Score: 108 bits (270), Expect = 3.720e-23 Identity = 85/293 (29.01%), Postives = 144/293 (49.15%), Query Frame = 1
Query: 1 SHAPLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGS-DSFERPILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASE-----EHGKPTPMLFASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVS 861
S PL R L+ +HS I+ FHH++GDG SG Y+M DL++ + + G +F+R +P R +E +P GM + M + + R +P+ L D ++S ++ L T +++ R T+VHGA+ AA+++AAS+ E P + SPV++R + PP+ +++G + S+ T H+V + W+LAR R+ ++ I G + + AR S FA+ ++ + +TN+ R I Y LS+E+L F VS
Sbjct: 109 STGPLLRVV-LLQNRNHSDIVTRFHHVMGDGTSGMYLMHDLIKLLGSICNGKVPTFKR--MPERPPVEELLPHMNNLEGMVKSATLASRQMFNIIMR--RPR-TLPIDRKASLEECFTRIVHCTLSKEETGALIERCRRESTSVHGAICAAMLMAASKQICNSEEKYPITLNCMSPVDLRPYLNPPLGEELGFYASMVITAHKVQDNGK-LWDLARSVRRRVQTSIQSGDPLVFISLLDMLTPHDAR---PSDFARRASQIYPAPIMVTNLRRIAIPKVYETLSLEKLHFVVS 391
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A8J6ZTZ0_DESMC (Condensation domain-containing protein n=1 Tax=Desmonostoc muscorum LEGE 12446 TaxID=1828758 RepID=A0A8J6ZTZ0_DESMC) HSP 1 Score: 108 bits (269), Expect = 4.030e-23 Identity = 89/282 (31.56%), Postives = 139/282 (49.29%), Query Frame = 1
Query: 7 APLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLFA-SPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLP-GVGLTNIGRADIASAYGALSIERL 846
APL R L+ + S +M+ HH+I DG+SG Y+MRD+L+ + G + FER +H+ AAL + F + PK P S + + VL P TQ+++ SRA TTVHGA+SAA +LA +++ KP+ ++ PVNVR + P+ D VGL+ + T H + P + FW++AR + +L ++ +A+ A L A+ FA+ Q P + +TN+GR ++A YG + IE L
Sbjct: 103 APLLRVV-LLQSEAESELMIICHHVIADGLSGVYLMRDILQRL-----GGEIFER----------SHLSAAL---SLESSLFGITPCPET------TPKPTDYIPPLSRRAPPHIHTV--VLSPELTQQLIQRSRAEHTTVHGAVSAAFLLALTQQDAKPSDVMQCLHPVNVRSHLSLPMPDGVGLYFCLCMTTHSLQPDSA-FWDVARSVKSQLSQIDIAQQLVEEHQLRQRAI---ANLTDATTFAEAGGSSQSPCQLNVTNLGRINMAQQYGNIWIEAL 353
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: UPI0016854544 (condensation domain-containing protein n=1 Tax=Nostoc flagelliforme TaxID=1306274 RepID=UPI0016854544) HSP 1 Score: 102 bits (253), Expect = 6.580e-21 Identity = 86/281 (30.60%), Postives = 135/281 (48.04%), Query Frame = 1
Query: 7 APLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLFA-SPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERL 846
APL R L+ + S +M+ HH I DG+SG Y+MR++L+ + G FER +E+ +P S + + + + R +P + VL P TQ+++ SRA TTVHGA+SAA +LA +++ KP+ ++ PVNVR + P+ D VGL++ T H + FW++AR + +L ID A L+ + A L A+ FA+ V+ + +TN+GR D+A YG + IE L
Sbjct: 103 APLLRVV-LLQSGAESELMIICHHAISDGLSGIYLMRNVLQGL-----GGKIFERSEFSATLSLESAIPGIAPSP----EATVKPTDYVPTLSRRPRPH-----------------IRTVVLSPELTQQLIQRSRAEHTTVHGAISAAFLLALTQQDVKPSDVMRCLHPVNVRSQLSLPMPDGVGLYIYFCMTTHSRMADSA-FWDVARSVKSQLSQ-IDI--AQQLVEERQLRQPAMANLTDATAFAEEVQSQYHCQLSVTNLGRIDMAQQYGNIRIEAL 352
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: A0A7W1A917_9CHLR (Condensation domain-containing protein n=1 Tax=Herpetosiphonaceae bacterium TaxID=2720503 RepID=A0A7W1A917_9CHLR) HSP 1 Score: 102 bits (253), Expect = 6.980e-21 Identity = 93/303 (30.69%), Postives = 148/303 (48.84%), Query Frame = 1
Query: 10 PLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVSRGMWR-----QFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKP--TPMLFASPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQS--KALVWWARLLP--ASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERLGFAVSLGCSREKG 885
PLAR L H D +TI+L+F H +GDG+S +MRDLLE+IA + G+ S P L +R +E +PAA RG+ + AR M + H G A D +A G LEP+ T+ +V +R++ TTVHG L AA+ LA ++ + P+ PV++ +EP I +++ LF + T++ A+ WE+A + +L I F L + +L+ R P +LV + ++P +N+G I +YG +++ GFA L + + G
Sbjct: 102 PLARCVVLRHTEDTATIILSFQHTLGDGMSSVTLMRDLLEAIAQSQDGAPS-PAP-LTLRPAVETFLPAA--GRGLRGIVNIVRMLARQSKMDTTAVTH---DGQAAHDKVHTAIGSYY------LEPSLTRALVAKARSHGTTVHGVLCAAVFLAVEKDFARTEAVPLSCVVPVDLHARVEPTIGEELLLF-NAPVTVYYRGGSARSVWEVASDITGKLNDSITRNEHFAGLSLMRLVSSLLARRRAKPNGEQGMQELVAKTEVPTFLFSNLGALKINHSYGPITLHSFGFAGGLAFTMDLG 390
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Match: UPI001685D466 (condensation domain-containing protein n=2 Tax=unclassified Leptolyngbya TaxID=2650499 RepID=UPI001685D466) HSP 1 Score: 101 bits (252), Expect = 8.560e-21 Identity = 83/281 (29.54%), Postives = 134/281 (47.69%), Query Frame = 1
Query: 7 APLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGGSDSFERPILPVRREIEAHVPAALVSRGMWRQFFARIGAMLSWMWRHGKPKGPLADDPRSSAGGRKVCVIPRVLEPARTQRIVDASRANQTTVHGALSAAIMLAASEEHGKPTPMLFA-SPVNVRETMEPPIEDDVGLFVSIGATLHQVDPGAQDFWELAREARQELRAFIDDGGAFTLLPMQSKALVWWARLLPASWFAKLVRRVQLPGVGLTNIGRADIASAYGALSIERL 846
APL R L+ + S +M+ HH I DG+SG Y+MRD+L+ + G FER L +E+ +P S KP D P + + + + +L P TQ+++ SR+ TTVHGA+SAA +LA +++ KP+ +L PVNVR + P+ + VGL++ T H + + FW++AR + +L ID A ++ + A L A+ + + + +TN+GR D+A YG + I+ L
Sbjct: 103 APLLRVI-LLQSEAESELMIICHHAIADGLSGVYLMRDILQGL-----GGKIFERSELSAALSLESALPGIAPSPEATA-----------------KP----TDYPPALSRRSRPHIHTVLLSPEFTQQLIQRSRSEHTTVHGAISAAFLLALTQQDVKPSDVLRCLHPVNVRSQLSLPMPEGVGLYICNCTTTHSLQADSA-FWDVARSVKSQLSQ-IDI--AQQIVEERQLRQPTMANLTDATALVEAAKSQYFCQLNVTNLGRIDMAQQYGNIRIKAL 352 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101515.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101515.1.1 >prot_L-digitata_M_contig101515.1.1 ID=prot_L-digitata_M_contig101515.1.1|Name=mRNA_L-digitata_M_contig101515.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=297bp SHAPLARFDWLVHAPDHSTIMLTFHHIIGDGISGAYVMRDLLESIAANMGback to top mRNA from alignment at L-digitata_M_contig101515:8..898+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101515.1.1 ID=mRNA_L-digitata_M_contig101515.1.1|Name=mRNA_L-digitata_M_contig101515.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=891bp|location=Sequence derived from alignment at L-digitata_M_contig101515:8..898+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101515:8..898+ >mRNA_L-digitata_M_contig101515.1.1 ID=mRNA_L-digitata_M_contig101515.1.1|Name=mRNA_L-digitata_M_contig101515.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=891bp|location=Sequence derived from alignment at L-digitata_M_contig101515:8..898+ (Laminaria digitata LdigPH10_18mv male)back to top |