mRNA_L-digitata_M_contig10151.3.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A6H5JRT4_9PHAE (Peptidase A1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JRT4_9PHAE) HSP 1 Score: 125 bits (315), Expect = 5.590e-32 Identity = 60/74 (81.08%), Postives = 69/74 (93.24%), Query Frame = 1
Query: 1 RCKKN-RCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHH-ESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC+++ RCGFSQ Y+EGSSW+AYQVEDVLWVGELTL++SEK++H ESAY V FMFGCIESQTGLFKTQLADGIM
Sbjct: 189 RCQRDKRCGFSQRYSEGSSWTAYQVEDVLWVGELTLQQSEKINHDESAYAVEFMFGCIESQTGLFKTQLADGIM 262
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A6H5LNK8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5LNK8_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 1.770e-21 Identity = 46/73 (63.01%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 1 RCKKNR-CGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC+ ++ C ++ YTE SSW A QV+D+LWVGELTL +S+K H +SA+ V F FGCIES TGLF+TQLADGIM
Sbjct: 173 RCQSDKKCVLTERYTERSSWRAKQVDDLLWVGELTLSDSQK-HDDSAFSVDFTFGCIESLTGLFRTQLADGIM 244
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A835ZHP7_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHP7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 2.100e-17 Identity = 41/67 (61.19%), Postives = 50/67 (74.63%), Query Frame = 1
Query: 16 RCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC FSQ Y+EGSSWSA+QV D L+ G TL+++ ++A + FMFGCI SQTGLF TQLADGIM
Sbjct: 84 RCVFSQSYSEGSSWSAFQVIDKLYTGLTTLQDTPP--DDAALSIDFMFGCINSQTGLFNTQLADGIM 148
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A7S2WCI1_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WCI1_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 4.010e-17 Identity = 42/75 (56.00%), Postives = 51/75 (68.00%), Query Frame = 1
Query: 1 RCKKNRCGFSQEYTEGSSWSAYQVEDVLWVGEL---TLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC K +C F Q YTEGSSW A+Q+EDVLW+G T + + + H A V FMFGC S+TGLF+TQ ADGIM
Sbjct: 150 RCVKGKCEFGQSYTEGSSWKAHQMEDVLWLGGSSSDTHDPASSIGH--ALAVRFMFGCQFSETGLFRTQRADGIM 222
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A7S1VZG5_9STRA (Hypothetical protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S1VZG5_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 7.210e-17 Identity = 37/71 (52.11%), Postives = 50/71 (70.42%), Query Frame = 1
Query: 4 CKKNRCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
C+KN+C Q+YTEGSSW+AY++ED++W G T E E L + V ++FGC +TGLF+TQ ADGIM
Sbjct: 181 CEKNKCRAQQKYTEGSSWTAYELEDIVWFG--TDNEIESLEIHMSLAVPYVFGCQTEETGLFQTQYADGIM 249
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A7S2B1E9_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B1E9_9STRA) HSP 1 Score: 79.7 bits (195), Expect = 8.280e-16 Identity = 38/71 (53.52%), Postives = 41/71 (57.75%), Query Frame = 1
Query: 4 CKKNRCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
C RC FSQ YTEGSSW A Q+ D LW G E V FMFGC S+TGLF+TQ ADGIM
Sbjct: 11 CVSRRCEFSQSYTEGSSWKAIQIIDKLWPGGKVAESEPAAEQNHKLAVDFMFGCQFSETGLFRTQKADGIM 81
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A7S2VFQ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2VFQ1_9STRA) HSP 1 Score: 79.0 bits (193), Expect = 1.700e-15 Identity = 38/72 (52.78%), Postives = 48/72 (66.67%), Query Frame = 1
Query: 4 CKKNRCGFSQEYTEGSSWSAYQVEDVLWVGEL-TLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
C+K +C FSQ YTEGSSW A QV+D + G L+ + HH+ Y + FMFGC+ +GLF TQLADGIM
Sbjct: 256 CEKGKCHFSQAYTEGSSWDAVQVKDHFYCGGSDVLDSVDPAHHK--YAIDFMFGCMTKMSGLFLTQLADGIM 325
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A7S4KB14_9STRA (Hypothetical protein (Fragment) n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4KB14_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 2.390e-15 Identity = 38/72 (52.78%), Postives = 45/72 (62.50%), Query Frame = 1
Query: 1 RCKKNRCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC NRC FSQ YTEGSSW AYQ D + G ++ + + + FMFGC S+TGLF TQLADGIM
Sbjct: 185 RCDANRCTFSQSYTEGSSWRAYQATDSFFAGGGDIDSGDN-PVDRTFATDFMFGCQTSETGLFVTQLADGIM 255
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A448ZDL6_9STRA (Peptidase A1 domain-containing protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZDL6_9STRA) HSP 1 Score: 78.2 bits (191), Expect = 3.260e-15 Identity = 38/69 (55.07%), Postives = 50/69 (72.46%), Query Frame = 1
Query: 16 RCGFSQEYTEGSSWSAYQVEDVLWVGELT--LEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
RC F+Q YTEGSSW+AYQ DV++ G LE + L ++ Y + F+FGC+++ TGLFKTQLADGIM
Sbjct: 457 RCTFTQAYTEGSSWTAYQARDVVYCGSGADLLEAVDPL--DTRYAIPFVFGCLKANTGLFKTQLADGIM 523
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Match: A0A835ZJF3_9STRA (Aspartic peptidase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF3_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 4.420e-15 Identity = 38/69 (55.07%), Postives = 49/69 (71.01%), Query Frame = 1
Query: 10 KNRCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGFMFGCIESQTGLFKTQLADGIM 216
++RC +SQ Y+EGSSW A+QV D ++ G + + +A GVGF FGCI+SQTGLF TQLADGIM
Sbjct: 77 QDRCIYSQSYSEGSSWHAFQVLDTVFAGPASAADVAPAA-AAASGVGFAFGCIDSQTGLFNTQLADGIM 144 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10151.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10151.3.1 >prot_L-digitata_M_contig10151.3.1 ID=prot_L-digitata_M_contig10151.3.1|Name=mRNA_L-digitata_M_contig10151.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=72bp RCKKNRCGFSQEYTEGSSWSAYQVEDVLWVGELTLEESEKLHHESAYGVGback to top mRNA from alignment at L-digitata_M_contig10151:6670..7565+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10151.3.1 ID=mRNA_L-digitata_M_contig10151.3.1|Name=mRNA_L-digitata_M_contig10151.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=896bp|location=Sequence derived from alignment at L-digitata_M_contig10151:6670..7565+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10151:6670..7565+ >mRNA_L-digitata_M_contig10151.3.1 ID=mRNA_L-digitata_M_contig10151.3.1|Name=mRNA_L-digitata_M_contig10151.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=216bp|location=Sequence derived from alignment at L-digitata_M_contig10151:6670..7565+ (Laminaria digitata LdigPH10_18mv male)back to top |