mRNA_L-digitata_M_contig101413.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101413.1.1
Unique NamemRNA_L-digitata_M_contig101413.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A2D7FMA0_9PROT (Serine hydroxymethyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D7FMA0_9PROT)

HSP 1 Score: 438 bits (1127), Expect = 7.430e-152
Identity = 222/241 (92.12%), Postives = 230/241 (95.44%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYPGY 723
            DF +FR IADSVGALL+VDMAHF+GLVAGGA+PSPFPHAHVATTTTHKTLRGPRGGMILTNDE IAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFR YS +VVENA ALAATLV+GGLDIVSGGTDTHLLLVDLRPKGLTGKVAE SLEAAGMTCNKNGIPFDPEKP ITSGVRLGSPAATTRGFGVAEF+QVGEMIVEVLDGLAS SNDNSA+E  VRKRVGELCARFPIYPGY
Sbjct:  194 DFTKFRAIADSVGALLLVDMAHFAGLVAGGAYPSPFPHAHVATTTTHKTLRGPRGGMILTNDEDIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRAYSKSVVENAGALAATLVKGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEVSLEAAGMTCNKNGIPFDPEKPTITSGVRLGSPAATTRGFGVAEFQQVGEMIVEVLDGLASNSNDNSALETGVRKRVGELCARFPIYPGY 434
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A2D8PPI7_9PROT (Serine hydroxymethyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D8PPI7_9PROT)

HSP 1 Score: 432 bits (1111), Expect = 2.000e-149
Identity = 216/239 (90.38%), Postives = 228/239 (95.40%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYP 717
            DFERFR+IADS+GALLMVDMAHF+GLVAGGAHPSPFPHAH+ATTTTHKTLRGPRGGMILTND+ IAK +NSA+FPGTQGGPLMHVIAAKA+AFGEAL+PEF+ YSAAVVENAR LAATLVEGGLDIVS GTDTHL+LVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKP ITSGVRLGSPAATTRGFGVAEFRQ+GEMIVEVLDGLASGSNDNS VE  VR RV ELCARFPIYP
Sbjct:  194 DFERFREIADSIGALLMVDMAHFAGLVAGGAHPSPFPHAHIATTTTHKTLRGPRGGMILTNDQDIAKNINSAVFPGTQGGPLMHVIAAKASAFGEALKPEFKIYSAAVVENARVLAATLVEGGLDIVSDGTDTHLVLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPAITSGVRLGSPAATTRGFGVAEFRQIGEMIVEVLDGLASGSNDNSYVEQSVRARVSELCARFPIYP 432
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A520NNY7_9PROT (Serine hydroxymethyltransferase n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NNY7_9PROT)

HSP 1 Score: 411 bits (1056), Expect = 4.520e-141
Identity = 206/239 (86.19%), Postives = 221/239 (92.47%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYP 717
            DF+RFR IADSV ALLMVDMAHF+GLVAG  HPSPFPHA VATTTTHKTLRGPRGGMILTNDE IAK+VNSAIFPGTQGGPLMHV+AAKAAAFGEALRPEF+ YSA V++NA+ LAATLV+GGLDIVSGGTDTHL LVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKP ITSG+RLGSPAATTRGFG AEF+++GEMIV+VLDGLAS  NDNS VEA VR +V ELCARFPIYP
Sbjct:  194 DFKRFRGIADSVDALLMVDMAHFAGLVAGDVHPSPFPHADVATTTTHKTLRGPRGGMILTNDEAIAKRVNSAIFPGTQGGPLMHVVAAKAAAFGEALRPEFKEYSAEVIKNAQTLAATLVDGGLDIVSGGTDTHLTLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPTITSGIRLGSPAATTRGFGEAEFKKIGEMIVQVLDGLASDGNDNSPVEAGVRDKVAELCARFPIYP 432
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A2S6Q7B0_9PROT (Serine hydroxymethyltransferase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q7B0_9PROT)

HSP 1 Score: 398 bits (1022), Expect = 6.550e-136
Identity = 196/239 (82.01%), Postives = 216/239 (90.38%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYP 717
            +F +FR+IADS+ A+LMVDMAHFSGLVAGGAHPSPFPHAHV TTTTHKTLRGPRGGMILTNDE IAKKVNSAIFPGTQGGPLMHVIAAKA AFGE+LRPEFR YS AVV+NA+ L+  L+EGGLDIVSGGTDTHL+LVDLRPKGLTGKV E SLEAAG+TCNKN IP DPEKP ITSG+RLG+PAATTRGFG  EFRQVGEMIVE+LDGLAS  NDN+A+E  VR+RV ++CA FPIYP
Sbjct:  194 EFAKFREIADSINAILMVDMAHFSGLVAGGAHPSPFPHAHVVTTTTHKTLRGPRGGMILTNDEEIAKKVNSAIFPGTQGGPLMHVIAAKATAFGESLRPEFREYSNAVVKNAQTLSQVLLEGGLDIVSGGTDTHLVLVDLRPKGLTGKVVEESLEAAGITCNKNSIPLDPEKPTITSGIRLGTPAATTRGFGQTEFRQVGEMIVEILDGLASNGNDNTAIEKSVRERVSKMCACFPIYP 432
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A2E6Q537_9PROT (Serine hydroxymethyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6Q537_9PROT)

HSP 1 Score: 394 bits (1011), Expect = 2.860e-134
Identity = 191/239 (79.92%), Postives = 213/239 (89.12%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYP 717
            DF +FR+IADSVGALLMVDMAHF+GLVAGG HPSP PHAHV TTTTHKTLRG RGGMILTNDE +AKK NSAIFPGTQGGPLMH+IA KAAAFGEAL+P F+ Y+ ++V+NA+ LA TLVEGGLDIVSGGTDTHL+LVDLRPKGLTG +AE +LE AG+TCNKNGIPFDPEKPM+TSGVRLG+PA TTRGFG AEFRQVGEMIVEVLDGLA+   DN +VE  VR+RV  LCARFP+YP
Sbjct:  194 DFAKFREIADSVGALLMVDMAHFAGLVAGGVHPSPIPHAHVVTTTTHKTLRGARGGMILTNDEALAKKFNSAIFPGTQGGPLMHMIAGKAAAFGEALKPSFKVYTQSIVDNAKTLAETLVEGGLDIVSGGTDTHLMLVDLRPKGLTGNIAETALERAGLTCNKNGIPFDPEKPMVTSGVRLGTPAGTTRGFGQAEFRQVGEMIVEVLDGLAANGEDNGSVEGAVRERVTALCARFPVYP 432
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: UPI0019D9C1F0 (Serine hydroxymethyltransferase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019D9C1F0)

HSP 1 Score: 389 bits (999), Expect = 5.250e-134
Identity = 190/240 (79.17%), Postives = 210/240 (87.50%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYPG 720
            DF RFRKIADSVGAL MVDMAHF+GLVA G HPSP PHA + TTTTHKTLRGPRGGMIL+N+E I KK+NSA+FPG QGGPLMH+IAAKA AFGEAL PEFR YS AV +NA+ LAATL+EGGLDIVSGGTDTHL+LVDLRPKGLTG ++E S+E A +TCNKNG+PFDPEKPM+TSGVRLG+PAATTRGFG AEFRQVGE+IVEVLDGLA+   DNSAVEA VR RV  LC RFPIY G
Sbjct:   85 DFARFRKIADSVGALFMVDMAHFAGLVAAGIHPSPLPHADIVTTTTHKTLRGPRGGMILSNNEDIGKKINSAVFPGLQGGPLMHIIAAKAVAFGEALTPEFRAYSQAVADNAKTLAATLIEGGLDIVSGGTDTHLMLVDLRPKGLTGNISEESMERASITCNKNGVPFDPEKPMVTSGVRLGTPAATTRGFGEAEFRQVGELIVEVLDGLAANRGDNSAVEASVRARVEALCGRFPIYSG 324
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A0A0D4C0_9PROT (Serine hydroxymethyltransferase n=5 Tax=Bacteria TaxID=2 RepID=A0A0A0D4C0_9PROT)

HSP 1 Score: 387 bits (995), Expect = 7.170e-132
Identity = 190/240 (79.17%), Postives = 211/240 (87.92%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYPG 720
            DF RFR+IADSVGA LMVDMAHF+GLVAGG HPSP PHAH+ TTTTHKTLRGPRGGM+L+ND  I KK+NS++FPG QGGPLMHVIAAKA AFGEALRPEF+ Y+ AVV+NA+ALA T+  GGLDIVSGGTDTHL+LVDLRPK LTGK AEASLE AGMTCNKNG+PFDPEKP ITSGVRLGSPAAT+RGFGVAEFRQVGEM VEVLDGLA+  +DNS VE  +R +V  LCA+FPIY G
Sbjct:  190 DFARFRQIADSVGAYLMVDMAHFAGLVAGGVHPSPLPHAHIVTTTTHKTLRGPRGGMVLSNDPEIGKKINSSVFPGLQGGPLMHVIAAKAVAFGEALRPEFKAYAKAVVDNAKALAETVRAGGLDIVSGGTDTHLMLVDLRPKKLTGKAAEASLEHAGMTCNKNGVPFDPEKPTITSGVRLGSPAATSRGFGVAEFRQVGEMAVEVLDGLAANPDDNSKVEKAIRAKVEALCAKFPIYQG 429
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A2E6GLG4_9PROT (Serine hydroxymethyltransferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GLG4_9PROT)

HSP 1 Score: 387 bits (993), Expect = 1.760e-131
Identity = 194/238 (81.51%), Postives = 211/238 (88.66%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIY 714
            DF RFR+IADSVGA LMVDMAHF+GLVAGG HPSP PHAHV TTTTHKTLRGPRGGMIL+NDE I+KK+NS+IFPGTQGGPLMHVIAAKA AFGEALRPEF GY+A VVENA+ LAATL   GL IVSGGTDTHL+LVDLRPKGLTGK AEASLE AG+TCNKNGIPFDPEKP ITSG+RLG+PAATTRGFG  EF+ VG MIVEVLDGLA+ + DNSAVE  VRK+VG LC +FPIY
Sbjct:  196 DFARFREIADSVGAFLMVDMAHFAGLVAGGVHPSPLPHAHVVTTTTHKTLRGPRGGMILSNDEEISKKINSSIFPGTQGGPLMHVIAAKAVAFGEALRPEFSGYAAQVVENAKTLAATLAGQGLYIVSGGTDTHLMLVDLRPKGLTGKDAEASLENAGITCNKNGIPFDPEKPTITSGIRLGTPAATTRGFGPEEFKTVGNMIVEVLDGLAASNGDNSAVEEKVRKQVGGLCDQFPIY 433
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: K9H219_9PROT (Serine hydroxymethyltransferase n=2 Tax=Caenispirillum TaxID=414051 RepID=K9H219_9PROT)

HSP 1 Score: 382 bits (981), Expect = 8.370e-130
Identity = 189/240 (78.75%), Postives = 211/240 (87.92%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYPG 720
            DF RFR+IAD VGALLMVDMAHF+GLVAGGAHPSP P+A V TTTTHKTLRGPRGGMIL+N+  I KK+NSA+FPG QGGPLMHVIAAKA AFGEAL+P+F+ Y+A VV NARAL+ TL++GGLDIV+GGTDTHL LVDLRPK LTG VAE SLE AGMTCNKNGIPFDPEKPM+TSGVRLG+PA TTRGFG AEF QVGEMIVEVLDGL++  +DNS VEA VR+RV +LC RFPIY G
Sbjct:  186 DFARFREIADKVGALLMVDMAHFAGLVAGGAHPSPLPYADVVTTTTHKTLRGPRGGMILSNNPDIGKKINSAVFPGLQGGPLMHVIAAKAVAFGEALKPDFKDYAAQVVANARALSETLIKGGLDIVAGGTDTHLTLVDLRPKKLTGNVAEHSLERAGMTCNKNGIPFDPEKPMVTSGVRLGTPAGTTRGFGTAEFTQVGEMIVEVLDGLSANPDDNSGVEATVRERVQDLCHRFPIYEG 425
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BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Match: A0A512E1Z6_9PROT (Serine hydroxymethyltransferase n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512E1Z6_9PROT)

HSP 1 Score: 382 bits (981), Expect = 1.160e-129
Identity = 188/241 (78.01%), Postives = 214/241 (88.80%), Query Frame = 1 
Query:    1 DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTLRGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPEFRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVAEASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVGEMIVEVLDGLA-SGSNDNSAVEAVVRKRVGELCARFPIYPG 720
            DF RFR+IAD VGA LMVDMAH++GL+AGG +P+P PHAHV TTTTHKTLRGPRGGM+L+NDE + KK+NSA+FPG QGGPLMHVIAAKA AFGEALRPEF+ Y+  VV+NARALA+ LVEGG+DIVSGGTD+H++LVDLRPKGLTGK AEASLE AGMTCNKNGIPFDPEKPM+TSGVRLG+PAATTRGFG AEF  VGE+I EVLDGLA S S DN+AVEA VR R+ +LC+RFPIY G
Sbjct:  188 DFARFREIADEVGAWLMVDMAHYAGLIAGGVYPNPVPHAHVTTTTTHKTLRGPRGGMVLSNDEALGKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFKTYARDVVDNARALASRLVEGGVDIVSGGTDSHIVLVDLRPKGLTGKAAEASLERAGMTCNKNGIPFDPEKPMVTSGVRLGTPAATTRGFGTAEFTLVGELISEVLDGLAASNSGDNAAVEAKVRGRIHDLCSRFPIYGG 428
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101413.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2D7FMA0_9PROT7.430e-15292.12Serine hydroxymethyltransferase n=1 Tax=Rhodospiri... [more]
A0A2D8PPI7_9PROT2.000e-14990.38Serine hydroxymethyltransferase n=1 Tax=Rhodospiri... [more]
A0A520NNY7_9PROT4.520e-14186.19Serine hydroxymethyltransferase n=2 Tax=Rhodospiri... [more]
A0A2S6Q7B0_9PROT6.550e-13682.01Serine hydroxymethyltransferase n=1 Tax=Alphaprote... [more]
A0A2E6Q537_9PROT2.860e-13479.92Serine hydroxymethyltransferase n=1 Tax=Rhodospiri... [more]
UPI0019D9C1F05.250e-13479.17Serine hydroxymethyltransferase n=1 Tax=Proteobact... [more]
A0A0A0D4C0_9PROT7.170e-13279.17Serine hydroxymethyltransferase n=5 Tax=Bacteria T... [more]
A0A2E6GLG4_9PROT1.760e-13181.51Serine hydroxymethyltransferase n=1 Tax=Rhodospiri... [more]
K9H219_9PROT8.370e-13078.75Serine hydroxymethyltransferase n=2 Tax=Caenispiri... [more]
A0A512E1Z6_9PROT1.160e-12978.01Serine hydroxymethyltransferase n=1 Tax=Skermanell... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101413contigL-digitata_M_contig101413:2..727 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1238182.C882_3970
Preferred nameglyA
PFAMsSHMT
Model size726
Max annot lvl204441|Rhodospirillales
KEGG rclassRC00022,RC00112,RC01583,RC02958
KEGG koko:K00600
KEGG ReactionR00945,R09099
KEGG Pathwayko00260,ko00460,ko00630,ko00670,ko00680,ko01100,ko01110,ko01120,ko01130,ko01200,ko01230,ko01523,map00260,map00460,map00630,map00670,map00680,map01100,map01110,map01120,map01130,map01200,map01230,map01523
KEGG ModuleM00140,M00141,M00346,M00532
Hectar predicted targeting categoryother localisation
Exons1
Evalue1.37e-130
EggNOG OGsCOG0112@1|root,COG0112@2|Bacteria,1MUIS@1224|Proteobacteria,2TQKT@28211|Alphaproteobacteria,2JQ46@204441|Rhodospirillales
EC2.1.2.1
DescriptionCatalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF- independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism
Cds size726
COG categoryE
BRITEko00000,ko00001,ko00002,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406618.5342793-CDS-L-digitata_M_contig101413:1..7271682406618.5342793-CDS-L-digitata_M_contig101413:1..727Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101413 2..727 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101413.1.1prot_L-digitata_M_contig101413.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101413 2..727 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101413.1.1

>prot_L-digitata_M_contig101413.1.1 ID=prot_L-digitata_M_contig101413.1.1|Name=mRNA_L-digitata_M_contig101413.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=242bp
DFERFRKIADSVGALLMVDMAHFSGLVAGGAHPSPFPHAHVATTTTHKTL
RGPRGGMILTNDETIAKKVNSAIFPGTQGGPLMHVIAAKAAAFGEALRPE
FRGYSAAVVENARALAATLVEGGLDIVSGGTDTHLLLVDLRPKGLTGKVA
EASLEAAGMTCNKNGIPFDPEKPMITSGVRLGSPAATTRGFGVAEFRQVG
EMIVEVLDGLASGSNDNSAVEAVVRKRVGELCARFPIYPGY*
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mRNA from alignment at L-digitata_M_contig101413:2..727+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101413.1.1 ID=mRNA_L-digitata_M_contig101413.1.1|Name=mRNA_L-digitata_M_contig101413.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=726bp|location=Sequence derived from alignment at L-digitata_M_contig101413:2..727+ (Laminaria digitata LdigPH10_18mv male)
GATTTCGAACGCTTCCGCAAAATCGCCGATTCCGTTGGCGCATTGCTGAT
GGTGGATATGGCGCATTTCTCGGGGCTGGTCGCCGGCGGCGCGCATCCCA
GCCCGTTCCCGCATGCGCATGTCGCGACGACGACAACGCATAAAACTCTG
CGCGGGCCGCGCGGCGGGATGATCCTGACCAATGACGAGACAATCGCGAA
GAAAGTGAACTCGGCGATTTTCCCAGGCACTCAGGGCGGGCCGCTGATGC
ATGTGATCGCGGCTAAAGCCGCGGCATTCGGCGAAGCGTTGCGACCGGAG
TTCAGGGGATATTCGGCCGCTGTCGTCGAGAACGCCAGAGCGCTCGCGGC
GACACTTGTCGAGGGAGGGCTCGACATCGTTTCCGGCGGAACCGACACGC
ATCTGTTGCTGGTAGATCTGCGGCCCAAAGGCCTGACCGGCAAGGTCGCC
GAGGCCAGTCTCGAGGCAGCCGGCATGACCTGCAACAAGAACGGCATTCC
TTTCGATCCCGAAAAGCCGATGATTACATCCGGTGTGCGGCTTGGTTCGC
CGGCGGCGACGACCCGCGGTTTCGGCGTTGCCGAGTTCCGGCAGGTCGGC
GAAATGATCGTCGAAGTGCTTGACGGGCTGGCATCGGGCTCGAACGATAA
TTCGGCTGTCGAAGCCGTCGTCCGGAAACGCGTCGGCGAGCTTTGTGCGC
GTTTTCCGATTTATCCGGGCTACTGA
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Coding sequence (CDS) from alignment at L-digitata_M_contig101413:2..727+

>mRNA_L-digitata_M_contig101413.1.1 ID=mRNA_L-digitata_M_contig101413.1.1|Name=mRNA_L-digitata_M_contig101413.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=726bp|location=Sequence derived from alignment at L-digitata_M_contig101413:2..727+ (Laminaria digitata LdigPH10_18mv male)
GATTTCGAACGCTTCCGCAAAATCGCCGATTCCGTTGGCGCATTGCTGAT
GGTGGATATGGCGCATTTCTCGGGGCTGGTCGCCGGCGGCGCGCATCCCA
GCCCGTTCCCGCATGCGCATGTCGCGACGACGACAACGCATAAAACTCTG
CGCGGGCCGCGCGGCGGGATGATCCTGACCAATGACGAGACAATCGCGAA
GAAAGTGAACTCGGCGATTTTCCCAGGCACTCAGGGCGGGCCGCTGATGC
ATGTGATCGCGGCTAAAGCCGCGGCATTCGGCGAAGCGTTGCGACCGGAG
TTCAGGGGATATTCGGCCGCTGTCGTCGAGAACGCCAGAGCGCTCGCGGC
GACACTTGTCGAGGGAGGGCTCGACATCGTTTCCGGCGGAACCGACACGC
ATCTGTTGCTGGTAGATCTGCGGCCCAAAGGCCTGACCGGCAAGGTCGCC
GAGGCCAGTCTCGAGGCAGCCGGCATGACCTGCAACAAGAACGGCATTCC
TTTCGATCCCGAAAAGCCGATGATTACATCCGGTGTGCGGCTTGGTTCGC
CGGCGGCGACGACCCGCGGTTTCGGCGTTGCCGAGTTCCGGCAGGTCGGC
GAAATGATCGTCGAAGTGCTTGACGGGCTGGCATCGGGCTCGAACGATAA
TTCGGCTGTCGAAGCCGTCGTCCGGAAACGCGTCGGCGAGCTTTGTGCGC
GTTTTCCGATTTATCCGGGCTACTGA
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