mRNA_L-digitata_M_contig101374.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101374.1.1
Unique NamemRNA_L-digitata_M_contig101374.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059E8I8_9PROT (Enoyl-CoA hydratase n=7 Tax=root TaxID=1 RepID=A0A059E8I8_9PROT)

HSP 1 Score: 385 bits (988), Expect = 2.400e-132
Identity = 192/194 (98.97%), Postives = 192/194 (98.97%), Query Frame = 3
Query:  345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLE DDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMI ADEAFRIGLVEQVVADADFDSACQDLADR
Sbjct:    1 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLETDDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMIRADEAFRIGLVEQVVADADFDSACQDLADR 194          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059E7B3_9PROT (Enoyl-CoA hydratase n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059E7B3_9PROT)

HSP 1 Score: 345 bits (885), Expect = 1.100e-116
Identity = 171/194 (88.14%), Postives = 179/194 (92.27%), Query Frame = 3
Query:  345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            MSE LVLRQD DGLATLTLNRPDKLNSLTVGMF+ELR HVLDL+ DDS+ CV+LRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIA+++ARFGDTHAKWALTPIWGMSQRLPRRVG+ATAKRLMFTADMI A EAFRIGL EQVVA   FD AC  LA R
Sbjct:    1 MSEALVLRQDNDGLATLTLNRPDKLNSLTVGMFQELRRHVLDLQKDDSIGCVVLRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIASDTARFGDTHAKWALTPIWGMSQRLPRRVGVATAKRLMFTADMIDAQEAFRIGLAEQVVAADRFDEACDALARR 194          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A062U466_9PROT (Enoyl-CoA hydratase n=3 Tax=Hyphomonas TaxID=85 RepID=A0A062U466_9PROT)

HSP 1 Score: 330 bits (846), Expect = 8.930e-111
Identity = 161/188 (85.64%), Postives = 176/188 (93.62%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
            LVLRQDKDGLATLTLNRPDKLN+LTVG+FRELR +VLD++ DDSV+CV+LRGAGKCFSAGHDL DIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFI+AAESARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTA+M  A EA RIGL E V  D++FD+A ++LA
Sbjct:    4 LVLRQDKDGLATLTLNRPDKLNALTVGVFRELRQNVLDIQTDDSVHCVVLRGAGKCFSAGHDLADIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIVAAESARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTAEMFGAAEAHRIGLAEHVYPDSEFDAAVENLA 191          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A069E5U6_9PROT (Enoyl-CoA hydratase/isomerase n=8 Tax=Hyphomonadaceae TaxID=69657 RepID=A0A069E5U6_9PROT)

HSP 1 Score: 325 bits (834), Expect = 6.140e-109
Identity = 164/194 (84.54%), Postives = 174/194 (89.69%), Query Frame = 3
Query:  345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            MS+ LV R+D DG A LTLNRPDKLN+LTVGMFRELR HV DL  DD+V+CVILRGAGKCFSAGHDL DIAEGE VPS GWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFI+AAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA+MI A+EAFRIGL E VV DA+FDSA   LA +
Sbjct:    1 MSDTLVTREDHDGCAILTLNRPDKLNALTVGMFRELRAHVSDLYKDDTVSCVILRGAGKCFSAGHDLADIAEGEAVPSRGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIMAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAEMIGAEEAFRIGLAEMVVPDAEFDSAILKLAQQ 194          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059G5S1_9PROT (Enoyl-CoA hydratase/isomerase n=2 Tax=Hyphomonas TaxID=85 RepID=A0A059G5S1_9PROT)

HSP 1 Score: 323 bits (829), Expect = 2.870e-108
Identity = 156/190 (82.11%), Postives = 174/190 (91.58%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            LVLR+D+DGLA LTLNRPDKLNSLTVG+FRELR HV+DL++DD++ CV+LRGAG+CFSAGHDLGDIAEGEKVPSPGWHSETLR++E LPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWAL PIWGMSQRLPRRVGIATAKRLMFTA+M  A EA RIGL EQVV DA+FD +   +A +
Sbjct:    4 LVLREDRDGLAVLTLNRPDKLNSLTVGVFRELREHVIDLKSDDTIGCVVLRGAGRCFSAGHDLGDIAEGEKVPSPGWHSETLRMLETLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALAPIWGMSQRLPRRVGIATAKRLMFTAEMFGAAEALRIGLAEQVVPDAEFDVSIDAMAQK 193          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A059FUP4_9PROT (Enoyl-CoA hydratase/isomerase n=1 Tax=Hyphomonas johnsonii MHS-2 TaxID=1280950 RepID=A0A059FUP4_9PROT)

HSP 1 Score: 318 bits (814), Expect = 5.440e-106
Identity = 156/190 (82.11%), Postives = 171/190 (90.00%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            LV R D++GLA LTLNRPDKLN+LTVGMFRELR H + L+ DDS+ CV+LRGAG+CFSAGHDLGDIAEGE VPSPGWHSETLRL+E LPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA++I A EAFRIGL EQVV DA FD+A   +A +
Sbjct:    4 LVTRDDRNGLAILTLNRPDKLNALTVGMFRELRAHAIALKKDDSIGCVVLRGAGRCFSAGHDLGDIAEGEAVPSPGWHSETLRLLETLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAELIGAAEAFRIGLAEQVVPDAGFDAAIDAMAQQ 193          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A062VH01_9PROT (Enoyl-CoA hydratase/isomerase n=7 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A062VH01_9PROT)

HSP 1 Score: 314 bits (804), Expect = 1.860e-104
Identity = 156/188 (82.98%), Postives = 168/188 (89.36%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
            +VLR+D+DGLA LTLNRPDKLNSLTVGMF ELR HVL L  DDS+ CV+LRGAG+CFSAGHDL DIAEGE VPS GWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESA+FGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTA+M  A EA R+GL E VV DA+FD+A   +A
Sbjct:    3 VVLREDRDGLAILTLNRPDKLNSLTVGMFEELRKHVLALYKDDSIGCVVLRGAGRCFSAGHDLADIAEGEAVPSRGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESAKFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTAEMFGAAEAHRMGLAELVVPDAEFDAAIDGIA 190          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0Y8D8_9GAMM (Enoyl-CoA hydratase/isomerase n=1 Tax=marine gamma proteobacterium HTCC2143 TaxID=247633 RepID=A0Y8D8_9GAMM)

HSP 1 Score: 313 bits (803), Expect = 2.920e-104
Identity = 154/190 (81.05%), Postives = 170/190 (89.47%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            LV+R DKDG A LTLNRPDKLNSLTVG+F+ELR H+LDL AD +++C++LRGAGKCFSAGHDLGDIAEGE+VPS GWHSETLRLME+LPKPVIAAVHGHCYTGALEVALAADFIIAA++ARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTADMI ADEA RIGL E  V    FD+  + LA R
Sbjct:    8 LVIRNDKDGCAWLTLNRPDKLNSLTVGVFKELRGHILDLRADKNIHCIVLRGAGKCFSAGHDLGDIAEGEEVPSRGWHSETLRLMEKLPKPVIAAVHGHCYTGALEVALAADFIIAADNARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTADMIGADEAVRIGLAEYAVPLDKFDAEVEALARR 197          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: A0A0F2RJ18_9PROT (Enoyl-CoA hydratase n=1 Tax=Hyphomonas sp. BRH_c22 TaxID=1629710 RepID=A0A0F2RJ18_9PROT)

HSP 1 Score: 313 bits (801), Expect = 5.120e-104
Identity = 152/188 (80.85%), Postives = 171/188 (90.96%), Query Frame = 3
Query:  357 LVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLA 920
            LV R+DKDGLA LTLNRPDKLNSLTVGMFRELR H + L+ D+++ CV+LRGAG+CFSAGHDLGDIAEGEKVPSPGWHSETLR++E LP+PVIAAVHGHCYTGALEVALAADFIIAA++A+FGDTHAKWALTPIWGMSQRLPRRVG+ATAKRLMFTA+MI+A EA RIGL EQVV   +FD+A   LA
Sbjct:    4 LVTREDKDGLALLTLNRPDKLNSLTVGMFRELRAHAIALKKDETIGCVVLRGAGRCFSAGHDLGDIAEGEKVPSPGWHSETLRMLETLPQPVIAAVHGHCYTGALEVALAADFIIAADTAKFGDTHAKWALTPIWGMSQRLPRRVGVATAKRLMFTAEMINAAEALRIGLAEQVVPADEFDAAIDALA 191          
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Match: UPI001F20F1B0 (enoyl-CoA hydratase/isomerase family protein n=1 Tax=Sulfitobacter sp. M220 TaxID=2675333 RepID=UPI001F20F1B0)

HSP 1 Score: 310 bits (795), Expect = 4.030e-103
Identity = 153/194 (78.87%), Postives = 170/194 (87.63%), Query Frame = 3
Query:  345 MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVNCVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAVHGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVGIATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR 926
            MSE LVLR+DKDG A LTLNRP+KLNSLTV +F+ELR H++DL  DD++ CV+LRGAGKCFSAGHDLGDIAEGE VPS GWHSETLRLME+LPKPVIAAVHGHCYTGALEVALAADFI+A+ +ARFGDTHAKWALTP+WGMSQRLPRRVGIATAKRLMFTADMI A+EA RIGL E VV    FD+  + L  R
Sbjct:    1 MSE-LVLREDKDGWAVLTLNRPEKLNSLTVSLFKELRQHIIDLRDDDAIRCVVLRGAGKCFSAGHDLGDIAEGEDVPSAGWHSETLRLMEKLPKPVIAAVHGHCYTGALEVALAADFIVASATARFGDTHAKWALTPVWGMSQRLPRRVGIATAKRLMFTADMIDANEAVRIGLAEYVVPPDQFDAEIEQLVAR 193          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101374.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A059E8I8_9PROT2.400e-13298.97Enoyl-CoA hydratase n=7 Tax=root TaxID=1 RepID=A0A... [more]
A0A059E7B3_9PROT1.100e-11688.14Enoyl-CoA hydratase n=2 Tax=Hyphomonas TaxID=85 Re... [more]
A0A062U466_9PROT8.930e-11185.64Enoyl-CoA hydratase n=3 Tax=Hyphomonas TaxID=85 Re... [more]
A0A069E5U6_9PROT6.140e-10984.54Enoyl-CoA hydratase/isomerase n=8 Tax=Hyphomonadac... [more]
A0A059G5S1_9PROT2.870e-10882.11Enoyl-CoA hydratase/isomerase n=2 Tax=Hyphomonas T... [more]
A0A059FUP4_9PROT5.440e-10682.11Enoyl-CoA hydratase/isomerase n=1 Tax=Hyphomonas j... [more]
A0A062VH01_9PROT1.860e-10482.98Enoyl-CoA hydratase/isomerase n=7 Tax=Alphaproteob... [more]
A0Y8D8_9GAMM2.920e-10481.05Enoyl-CoA hydratase/isomerase n=1 Tax=marine gamma... [more]
A0A0F2RJ18_9PROT5.120e-10480.85Enoyl-CoA hydratase n=1 Tax=Hyphomonas sp. BRH_c22... [more]
UPI001F20F1B04.030e-10378.87enoyl-CoA hydratase/isomerase family protein n=1 T... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101374contigL-digitata_M_contig101374:3..928 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1207058.L53_05835
PFAMsECH_1
Model size926
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.39e-135
EggNOG OGsCOG1024@1|root,COG1024@2|Bacteria,1R623@1224|Proteobacteria,2U5F0@28211|Alphaproteobacteria,440SD@69657|Hyphomonadaceae
DescriptionCOG1024 Enoyl-CoA hydratase carnithine racemase
Cds size582
COG categoryI
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406618.2729065-CDS-L-digitata_M_contig101374:2..5841682406618.2729065-CDS-L-digitata_M_contig101374:2..584Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101374 3..584 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406618.2809756-UTR-L-digitata_M_contig101374:584..9281682406618.2809756-UTR-L-digitata_M_contig101374:584..928Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig101374 585..928 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101374.1.1prot_L-digitata_M_contig101374.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101374 3..584 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101374.1.1

>prot_L-digitata_M_contig101374.1.1 ID=prot_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=194bp
MSEPLVLRQDKDGLATLTLNRPDKLNSLTVGMFRELRHHVLDLEADDSVN
CVILRGAGKCFSAGHDLGDIAEGEKVPSPGWHSETLRLMERLPKPVIAAV
HGHCYTGALEVALAADFIIAAESARFGDTHAKWALTPIWGMSQRLPRRVG
IATAKRLMFTADMISADEAFRIGLVEQVVADADFDSACQDLADR
back to top

mRNA from alignment at L-digitata_M_contig101374:3..928-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101374.1.1 ID=mRNA_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=926bp|location=Sequence derived from alignment at L-digitata_M_contig101374:3..928- (Laminaria digitata LdigPH10_18mv male)
GTCACTTATATGCGCCGCACAGCAACAGCGGAGGCGGACCTTGGCGGCCA GACCATCGCCGAGGGCGATAAAGTGGTCATGTACTATGCCGCGGCCAATC GAGACCCGTCCAAGTTTCCCGAACCGAACCGTTTCGACATCACCCGCGCC AATGCGAAGGAACATCTGGCGTTCGGCCATGGCCCGCATGTCTGCCTGGG CCAGCGCGTTGCCAACATGCAGCTGGACTCAGCCTATCGCAACATCCTCT CACGCTTCCCGAACATAAAGTGGACTGGCGAACAAACCCTCGCGCCCAGC AATTTCGTGCACGCCATTTCAAGCCTCATGGTGGACCTCGGCACATGAGC GAGCCGCTGGTCCTTCGTCAGGACAAAGACGGCCTTGCGACTCTTACCTT GAATCGGCCCGACAAACTCAATTCACTCACGGTCGGCATGTTCCGCGAAC TTCGCCATCATGTGCTCGACCTCGAGGCGGATGACAGTGTGAATTGCGTT ATCCTGCGCGGGGCGGGCAAATGCTTCTCTGCCGGGCATGATCTTGGCGA CATTGCCGAAGGAGAAAAAGTCCCGTCACCGGGGTGGCACTCTGAAACGC TCCGCCTGATGGAGCGCCTGCCCAAGCCGGTCATCGCGGCCGTCCACGGC CACTGCTATACAGGTGCGTTGGAAGTTGCCCTCGCGGCTGATTTCATCAT CGCCGCGGAAAGCGCACGTTTCGGAGACACACATGCCAAATGGGCGCTTA CCCCGATCTGGGGCATGAGCCAGCGCCTGCCACGCCGTGTAGGGATTGCC ACGGCAAAACGCCTGATGTTCACCGCCGACATGATCAGTGCTGATGAGGC CTTCCGCATCGGCCTCGTCGAGCAAGTTGTAGCAGACGCCGACTTCGACA GCGCGTGTCAGGACTTGGCGGATCGC
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig101374:3..928-

>mRNA_L-digitata_M_contig101374.1.1 ID=mRNA_L-digitata_M_contig101374.1.1|Name=mRNA_L-digitata_M_contig101374.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=582bp|location=Sequence derived from alignment at L-digitata_M_contig101374:3..928- (Laminaria digitata LdigPH10_18mv male)
ATGAGCGAGCCGCTGGTCCTTCGTCAGGACAAAGACGGCCTTGCGACTCT
TACCTTGAATCGGCCCGACAAACTCAATTCACTCACGGTCGGCATGTTCC
GCGAACTTCGCCATCATGTGCTCGACCTCGAGGCGGATGACAGTGTGAAT
TGCGTTATCCTGCGCGGGGCGGGCAAATGCTTCTCTGCCGGGCATGATCT
TGGCGACATTGCCGAAGGAGAAAAAGTCCCGTCACCGGGGTGGCACTCTG
AAACGCTCCGCCTGATGGAGCGCCTGCCCAAGCCGGTCATCGCGGCCGTC
CACGGCCACTGCTATACAGGTGCGTTGGAAGTTGCCCTCGCGGCTGATTT
CATCATCGCCGCGGAAAGCGCACGTTTCGGAGACACACATGCCAAATGGG
CGCTTACCCCGATCTGGGGCATGAGCCAGCGCCTGCCACGCCGTGTAGGG
ATTGCCACGGCAAAACGCCTGATGTTCACCGCCGACATGATCAGTGCTGA
TGAGGCCTTCCGCATCGGCCTCGTCGAGCAAGTTGTAGCAGACGCCGACT
TCGACAGCGCGTGTCAGGACTTGGCGGATCGC
back to top