mRNA_L-digitata_M_contig101349.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A538K529_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538K529_9ACTN) HSP 1 Score: 102 bits (255), Expect = 7.340e-23 Identity = 70/171 (40.94%), Postives = 97/171 (56.73%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAAS-LPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASDFVPPDSGDLTLREAPGPAP 695
D E+DRL+ L L++F R+ LA+RL G + + EV+ L KPSV AW INQ++RQR+D V L+AA ++R AQ DA + L QA DE+ A+ + A +L AG S + +DR +RAAA + GR L++GRL+ D P L E GPAP
Sbjct: 5 DQEVDRLFELPLEDFTAARNELARRLKGEGDAPAAEEVKRLPKPSVAAWTINQLSRQRKDAVGALVAAAAKLRKAQERALQSEGDAGNALRQAQEDERRAIRGLTHQAQQLLEAAGRPVSSSVLDRISSTLRAAAVSDEGRAALEAGRLSGDVKPSGFDALAGLEL-GPAP 174
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A538DNU8_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538DNU8_9ACTN) HSP 1 Score: 100 bits (250), Expect = 4.010e-22 Identity = 76/181 (41.99%), Postives = 101/181 (55.80%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAAS-LPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASDFVPPDS---GDLTLREAPG--PAPRGRDE 710
D E+DRL+ L L+EF R+ LA RL G + + EV+ L KPSV AW INQ++RQR D V L+AA ++R Q DA + L QA DE+ A+ + + A IL +AG S +DR +RAAA + GR L++GRL+ D P G L L +AP PAP RDE
Sbjct: 5 DQEVDRLFELPLEEFTAARNDLAGRLKSEGDAAAAEEVKRLTKPSVAAWTINQLSRQRTDAVGALLAAGAKLRETQERALQSKGDAGNALRQAQEDERQAIRALTQEAQHILEDAGRPVSSTLLDRVSSTLRAAAVSDGGRAALEAGRLSGDVKPSGFDALGGLELAKAPRGRPAPA-RDE 184
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A537WXF2_9ACTN (Uncharacterized protein n=2 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537WXF2_9ACTN) HSP 1 Score: 96.3 bits (238), Expect = 1.850e-20 Identity = 68/180 (37.78%), Postives = 98/180 (54.44%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVN-QPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASDFVPPDSGDLTLREAPGPAPRGRDEGRRA 722
++ELDRLYGL LDEF R+ L RL AG + + V A KPSV WA+NQ+AR+ D V +L+ A +++R AQ E +DA +A E+ +L ++ +A +L+E +SHAT++R R +R+AA D L +GRL + +S A P PR RRA
Sbjct: 12 ESELDRLYGLPLDEFTAARNELVTRLRKAGQGDAAESVRAFRKPSVAVWAVNQLARRHADDVHELVTAGEQLRNAQATAMRGEGADAVR--EATAAERESLGKLTRLAERLLAEESRPASHATLERIARTLRSAAVDAAAAALLAAGRLPDEV---ESSGFAALAAIAPPPRKPGRPRRA 186
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A538A579_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538A579_9ACTN) HSP 1 Score: 92.4 bits (228), Expect = 7.360e-19 Identity = 61/148 (41.22%), Postives = 88/148 (59.46%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRL 629
DAELDR+YGL L+EF R+ LA RL AG E + V AL KPSV W++NQ+AR+ D + +L+ A R+R AQ + A ++ QA E+AA+ ++ +A +L+E +S AT++R +RAAA D L +GRL
Sbjct: 12 DAELDRIYGLPLEEFTAARNELATRLRKAGQDEAAEGVRALRKPSVAVWSVNQLARRHPDEMQELLQAGKRLRDAQ-SAALRGKGADTVRQATAAERAAVRKLTRLAERLLTEERRSASQATLERIAATLRAAAVDPDAAALLAAGRL 158
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A1Q7UG61_9ACTN (Uncharacterized protein n=1 Tax=Actinobacteria bacterium 13_1_20CM_4_69_9 TaxID=1803481 RepID=A0A1Q7UG61_9ACTN) HSP 1 Score: 90.9 bits (224), Expect = 2.440e-18 Identity = 57/151 (37.75%), Postives = 84/151 (55.63%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASD 638
+ E+D L+ L LDEF R+ LA+RL G ++ + +V +L KPS+ AWA+NQ+AR+ + V L+ R+R+AQ A L A +E+ + R+ A +L EAG +S T++R +RAAA E GR L GRL D
Sbjct: 5 EREIDELFDLPLDEFTAARNDLAKRLKRDGDADAAEQVRSLPKPSIAAWAVNQLARREPEAVRSLLNVAARLRSAQERSLKGERAADELRGAQAEEREIIRRLTRSAEGVLREAGRPASGTTLERVASLLRAAAVGEPGRTMLREGRLTGD 155
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A7W0H5Y7_9ACTN (Uncharacterized protein (Fragment) n=1 Tax=Thermoleophilaceae bacterium TaxID=2732252 RepID=A0A7W0H5Y7_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 5.300e-18 Identity = 61/148 (41.22%), Postives = 82/148 (55.41%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRL 629
DAE+DRLYG LDEFV ERD LA+RL AG E V+AL KP+ AWA+NQ R+RR L+ R+R A + D A L + + +E++ + + + A I SE G S A DR + AAA D+ R++L GR
Sbjct: 4 DAEIDRLYGTPLDEFVHERDELARRLIRAGDREAGGRVKALRKPTAGAWALNQAVRRRRAETGALLETGQRLREAH-EELLSGGDPAVLRETMAEERSLTSALADCAEAIASETGK-SGAALRDRVRATLHAAAVDDEAREELAGGRF 149
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A6J4TMR4_9ACTN (Uncharacterized protein n=1 Tax=uncultured Solirubrobacteraceae bacterium TaxID=1162706 RepID=A0A6J4TMR4_9ACTN) HSP 1 Score: 87.8 bits (216), Expect = 5.760e-17 Identity = 59/142 (41.55%), Postives = 79/142 (55.63%), Query Frame = 3
Query: 204 LYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRL 629
LYGL LD F+PER ALA+ L + + V AL KPSV AWA+NQ+ R + V +L AA D +R AQ N D +L A E+AA+ + E A +L G+ S ++R + AAA DER R+Q+ GRL
Sbjct: 6 LYGLPLDRFIPERTALARALRADKRRDEATAVAALRKPSVAAWAVNQLVRSQGAGVAELYAAGDALRGAQENLLAGSGDGRALRAADERERAAVDALVEAARGLLDSDGHELSATVVERVSDTLHAAALDERAREQVRVGRL 147
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A538JRA0_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A538JRA0_9ACTN) HSP 1 Score: 87.0 bits (214), Expect = 8.320e-17 Identity = 68/176 (38.64%), Postives = 95/176 (53.98%), Query Frame = 3
Query: 189 AELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASDFVPPDSG---DLTLREAPGP---APR 698
A LD LY L+ F+ R+ALA+ LA A + +A V+AL KPS+ AWA+NQ++R R V L+ A + +R AQ + E D + L +A R + R+ +A +LS++G S A DR ++A A DE R+ L GRL D P G DLT+ P P APR
Sbjct: 4 AGLDALYSEPLETFIAARNALAKALAQAADRDGAAVVKALRKPSIAAWALNQLSRTRPAEVERLLLAGEELRDAQ-HDALEGGDPSRLREARRAHDGEVDRLAGMAAEVLSDSGKPPSPAQRDRITSTLQAVAGDEEARELLRRGRLERDLEPAGFGFVDDLTIVSTPAPREPAPR 178
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A537ZSS7_9ACTN (Uncharacterized protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A537ZSS7_9ACTN) HSP 1 Score: 82.0 bits (201), Expect = 4.410e-15 Identity = 54/148 (36.49%), Postives = 83/148 (56.08%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRL 629
D ELDRLYGL LDEF R+ LA RL AG ++ + V L KP V W +NQ+AR+ + +L+ ++R AQ + A ++ +A E+A+L R+ +A +L+ G ++ A ++R +RAAA D L++GRL
Sbjct: 12 DEELDRLYGLPLDEFTAVRNELATRLRKAGQADAAERVRTLRKPGVAVWTVNQLARRHPGEIDELVENGRQLRDAQAKAL-RGTGADAVREATAAERASLRRVTRLAEELLNGEGRPATAAMLERIASTLRAAAVDPDAAALLEAGRL 158
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Match: A0A352FNP6_9BACT (Uncharacterized protein n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A352FNP6_9BACT) HSP 1 Score: 77.8 bits (190), Expect = 3.270e-13 Identity = 54/155 (34.84%), Postives = 82/155 (52.90%), Query Frame = 3
Query: 186 DAELDRLYGLALDEFVPERDALAQRLADAGASEHSAEVEALAKPSVVAWAINQIARQRRDLVTDLIAAVDRVRAAQVNQPDEHSDAASLPQALRDEKAALARIEEIAPTILSEAGYVSSHATIDRALRCIRAAAADERGRKQLDSGRLASDFVPP 650
+ ++D L+ L L EF+ R+ALA RL AG + + +V+ALAKPS+ AWA NQ+ Q RD+ L++ R R AQ + A + + L + ALA + ++ T+L +AG+ S T+ R + A + SGRL D PP
Sbjct: 11 EEDVDALFTLPLSEFIGARNALAARLKKAGHGDEANQVKALAKPSISAWAANQLYWQHRDVFDQLMSTGQRFRKAQTARK-----VAEINETLGARREALAHLSDLTTTLLRDAGHSPSPETVHRITTTLEALSVYASLPGGPRSGRLTQDVDPP 160 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101349.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101349.1.1 >prot_L-digitata_M_contig101349.1.1 ID=prot_L-digitata_M_contig101349.1.1|Name=mRNA_L-digitata_M_contig101349.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=50bp GSYDPCGDKECGDPCQICDEGDNECVEPAGQKTCNSRSVCTTAGPPVCS*back to top mRNA from alignment at L-digitata_M_contig101349:2..723- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101349.1.1 ID=mRNA_L-digitata_M_contig101349.1.1|Name=mRNA_L-digitata_M_contig101349.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=722bp|location=Sequence derived from alignment at L-digitata_M_contig101349:2..723- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101349:2..723- >mRNA_L-digitata_M_contig101349.1.1 ID=mRNA_L-digitata_M_contig101349.1.1|Name=mRNA_L-digitata_M_contig101349.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=150bp|location=Sequence derived from alignment at L-digitata_M_contig101349:2..723- (Laminaria digitata LdigPH10_18mv male)back to top |