mRNA_L-digitata_M_contig101285.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A2E7PII7_9PROT (Riboflavin biosynthesis protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PII7_9PROT) HSP 1 Score: 234 bits (597), Expect = 2.500e-72 Identity = 110/178 (61.80%), Postives = 143/178 (80.34%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MRI RH +P + +G V+A+GNFDGLHRGHQ VIATARDIAR+ R+FG++TFEPHPR +FG PFRLTPFRIKVRELQALG + LFVLRF+ ++A A+ F++ +LH GI +HVVVG++F FGAGR+G+P+ LAAR +ELGF + V+PA +EV E+YS+++IR+YL NGQP
Sbjct: 1 MRIYRHVDALPDSARGTVVAIGNFDGLHRGHQKVIATARDIARSQARQFGVITFEPHPRAFFGSVDVPFRLTPFRIKVRELQALGIEQLFVLRFNAALAGCAAEDFLSGVLHGGIAPAHVVVGFNFKFGAGRDGDPDLLAARGKELGFDVTCVEPAHNEVGEVYSASMIREYLTNGQP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A2E7I2N9_9PROT (Riboflavin biosynthesis protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I2N9_9PROT) HSP 1 Score: 229 bits (585), Expect = 1.600e-70 Identity = 110/178 (61.80%), Postives = 139/178 (78.09%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MRI RH + +P + KG+V+A+GNFDGLHRGHQ VIATARDIARA R+F +LTFEPHPR +FG PFRLTPFRIKVRE QALG + LFVLRF+ ++++ A+ FV++ LH GI ++H+VVGY+F FG+GR+G+ E L R ELGF + V PA D+ E+YSSTLIRKYL NG+P
Sbjct: 1 MRIYRHASDLPDSAKGSVVAIGNFDGLHRGHQKVIATARDIARAQSRQFAVLTFEPHPRAFFGNADAPFRLTPFRIKVREFQALGVEQLFVLRFNKALSQCTAEQFVSEFLHGGIASAHIVVGYNFKFGSGRDGDFELLTRRGAELGFDVTCVDPACDDAGEVYSSTLIRKYLTNGKP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A848W3Z7_9PROT (Riboflavin biosynthesis protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W3Z7_9PROT) HSP 1 Score: 208 bits (530), Expect = 2.780e-62 Identity = 104/178 (58.43%), Postives = 129/178 (72.47%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MR+ RH VPA +GAV+A+GNFDGLH+GHQ V+A AR A A G+ ++TF PHPR +F + EPFRLTPFR KVR ALG D+L V RFD +A AD+F+ +LH+G+GASHVVVG+DFAFG R GNP L AR ELGF + V PA+D EEIYSS++IR+ LQ+GQP
Sbjct: 1 MRLFRHIPSVPADARGAVVAIGNFDGLHKGHQVVLAAARAQADALGQPLALMTFRPHPRRFFRPDDEPFRLTPFRGKVRATAALGVDILLVCRFDVKMANITADAFIETLLHQGLGASHVVVGHDFAFGNKRSGNPALLQARGAELGFGVTVVGPAKDTNEEIYSSSVIRQSLQDGQP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A2E0F9E5_9RICK (Bifunctional riboflavin kinase/FMN adenylyltransferase n=1 Tax=Rickettsiales bacterium TaxID=2026788 RepID=A0A2E0F9E5_9RICK) HSP 1 Score: 209 bits (532), Expect = 5.580e-61 Identity = 116/288 (40.28%), Postives = 177/288 (61.46%), Query Frame = 1
Query: 1 GDTNPMHLNEEYAGQTMFAGTIAHGMLCSSFISTVVGTRLPGPGCVYVSQTLKFKAPVRPGDTVTARATVTELVPGKNRAILETICTVGDKVVISGEAQVLVPQKNSYIAPMRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAE-ELGFRASAVQPARDEVEEIYSSTLIRKYLQNG 861
GD NP+H+N E+A +T+F IAHG L +SFISTV+ T+LPGPG +Y+ Q+LKF APV + + ++TE+ + + L T C +++GEA++LV K + + M++ R F +P AVIA+GNFDGLH GHQ VI A+ I++ +K G+LTFEPHP+ +F K+ + FRL+PFR+K ++ +G + + ++FD + A+ FV +IL E + ++V G+DF FG + GN + + AE F + + EI SS+ IRK L+NG
Sbjct: 42 GDNNPVHINNEFAERTIFKKKIAHGFLSASFISTVIATKLPGPGSIYLKQSLKFLAPVFIDEEIVVNVSITEVNKERGKVKLLTECFKSGNKILTGEAEILVSSKKNNL--MKVFRSFD-IPNNYLDAVIAVGNFDGLHLGHQKVILEAQKISKEKKKKLGVLTFEPHPKCFFKKKFDFFRLSPFRVKYSLMREIGVEFMLNIKFDYKLVNINAEDFVKNILIEKLKVFYIVTGFDFVFGNQQSGNVKTMKKLAELTKKFFFKEISEFKFGNNEI-SSSEIRKNLRNG 325
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: UPI001A95970F (bifunctional riboflavin kinase/FAD synthetase n=1 Tax=Azospirillum sp. SYSU D00513 TaxID=2812561 RepID=UPI001A95970F) HSP 1 Score: 192 bits (487), Expect = 5.670e-56 Identity = 100/178 (56.18%), Postives = 118/178 (66.29%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MR+ RH +PA +GAV+ALGNFDG+H GH+HVIATA+ IAR G G LTFEPHPR+ F PFRLTPFRIK R+ +ALG DL VL FD S +R A+SFV + L G+G HVV GYDF FG GR GN E L A GF + V PARDE +YSST +R+ L G P
Sbjct: 1 MRVFRHTNDLPAEVRGAVVALGNFDGVHLGHRHVIATAQGIARDLGAPAGALTFEPHPRSVFRPADAPFRLTPFRIKTRQFEALGLDLAVVLHFDESFLQRSAESFVEEDLVRGLGVRHVVCGYDFLFGHGRRGNAELLKALGARHGFGVTEVGPARDEAGGVYSSTRVREALIAGDP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A1G3ICK5_9PROT (Riboflavin biosynthesis protein n=1 Tax=Rhodospirillales bacterium RIFCSPLOWO2_12_FULL_58_28 TaxID=1802022 RepID=A0A1G3ICK5_9PROT) HSP 1 Score: 189 bits (480), Expect = 6.330e-55 Identity = 96/178 (53.93%), Postives = 119/178 (66.85%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MRI RH+ +P +GAV+A+GNFDG+H GHQ VI A IARA G + LTFEPHPR+ FG E+ PFRLTPFR K R ++ALG D+L L FD A+R A++FV DIL +GA HVV GYDF FG GR+GN E L GF + V+P D+ E YSST +R+YL +G P
Sbjct: 1 MRIFRHYEELPEEARGAVVAIGNFDGVHLGHQAVIREAGRIARASGFPWAALTFEPHPRSVFGAEAAPFRLTPFRTKARHIKALGVDILVALHFDLEFAERTAEAFVDDILVNALGARHVVSGYDFVFGHGRKGNCESLLHMGGIAGFGFTCVRPVEDDAGEAYSSTRVRRYLIDGNP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A4R6WW04_9PROT (Riboflavin biosynthesis protein n=1 Tax=Dongia mobilis TaxID=578943 RepID=A0A4R6WW04_9PROT) HSP 1 Score: 187 bits (474), Expect = 7.530e-54 Identity = 97/178 (54.49%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MR++RH VPA +GAV+ALGNFDG+H GHQ VI +IARA G+LTFEPHPR++F E FRLTPFRIK R LQALG D LF L FD +A R A++FV +IL G+G +HVVVGYDF FG GR GN L GF ++V A+ YSSTL+R+ LQ G P
Sbjct: 1 MRLIRHLGDVPAEGRGAVVALGNFDGVHLGHQAVILQTAEIARARRAPLGVLTFEPHPRSFFRPEDPVFRLTPFRIKTRHLQALGVDHLFELTFDAEMAGRTAENFVEEILVAGLGVAHVVVGYDFCFGKGRTGNAALLTEYGGRHGFGVTSVAAAKSGEGPAYSSTLVRQQLQAGDP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: UPI0013017712 (bifunctional riboflavin kinase/FAD synthetase n=4 Tax=Skermanella TaxID=204447 RepID=UPI0013017712) HSP 1 Score: 186 bits (472), Expect = 1.050e-53 Identity = 92/178 (51.69%), Postives = 117/178 (65.73%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MR+ RH+T +P +GAV+ALGNFDG+H GH+ VI TA D ARA G+ +LTFEPHPR+ F EPFRLTPFR K R ++ LG DLLFV+ FD + + + A FV ++L G+GASHVV GYDF FG R G+ YL A GF + V+PA D ++SST +R L G P
Sbjct: 1 MRLFRHYTDLPEDARGAVVALGNFDGVHSGHRIVIGTAADTARATGKPLAVLTFEPHPRSLFRPADEPFRLTPFRTKARHIEELGVDLLFVIHFDQAFSCKTAQQFVDEVLVAGLGASHVVAGYDFVFGHKRGGDVGYLYQAARTAGFGVTEVKPAADAAGGVFSSTRVRDLLAAGNP 178
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: A0A2S6RB26_9PROT (FAD synthase (Fragment) n=1 Tax=Alphaproteobacteria bacterium MarineAlpha10_Bin1 TaxID=2013103 RepID=A0A2S6RB26_9PROT) HSP 1 Score: 179 bits (454), Expect = 8.230e-53 Identity = 90/156 (57.69%), Postives = 109/156 (69.87%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPA 801
MRI RH+ VPA +GAV+A+GNFDG+H GHQ VIA A IARA G +LTFEPHPR +FG+ PFRLTPFRIK+RE+ LG D+L++LRFD +A A+ F+ +L EG+G SHVVVGYDFAFG R GN L AE G+R S V A
Sbjct: 1 MRIYRHWRDVPAQGRGAVVAIGNFDGVHLGHQAVIAEAGRIARARGAPLAVLTFEPHPREFFGRTDGPFRLTPFRIKMREIAGLGVDILYLLRFDRDLASLTAEDFIHRLLVEGLGVSHVVVGYDFAFGHARGGNYAMLQENAEAGGYRVSQVSVA 156
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Match: W9H8P0_9PROT (Riboflavin biosynthesis protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9H8P0_9PROT) HSP 1 Score: 184 bits (466), Expect = 8.280e-53 Identity = 91/178 (51.12%), Postives = 120/178 (67.42%), Query Frame = 1
Query: 334 MRILRHFTGVPAADKGAVIALGNFDGLHRGHQHVIATARDIARADGRKFGILTFEPHPRTYFGKESEPFRLTPFRIKVRELQALGADLLFVLRFDGSIAKRPADSFVTDILHEGIGASHVVVGYDFAFGAGREGNPEYLAARAEELGFRASAVQPARDEVEEIYSSTLIRKYLQNGQP 867
MR+ RHFT +P +GAV+ALGNFDGLHRGH+ VI TA DIA+A G+ +LTFEPHPR+ F PFRLTPFRIK R ++ +G DLLFV+ FD + ++ A+ F+ ++L +G+ ASHVV GYDF FG R G+ L A GF + V+PA D ++SST +R L +G P
Sbjct: 1 MRLFRHFTDLPEDARGAVVALGNFDGLHRGHRIVIGTAADIAQATGKPLAVLTFEPHPRSLFRPGDAPFRLTPFRIKARHIENVGVDLLFVIHFDKAFSQWTAERFIDEVLVKGLAASHVVAGYDFVFGHKRGGDVGMLYQSARGAGFGVTEVKPAADASGGVFSSTRVRDLLTSGDP 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101285.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101285.1.1 >prot_L-digitata_M_contig101285.1.1 ID=prot_L-digitata_M_contig101285.1.1|Name=mRNA_L-digitata_M_contig101285.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=284bp MHLNEEYAGQTMFAGTIAHGMLCSSFISTVVGTRLPGPGCVYVSQTLKFKback to top mRNA from alignment at L-digitata_M_contig101285:2..928- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101285.1.1 ID=mRNA_L-digitata_M_contig101285.1.1|Name=mRNA_L-digitata_M_contig101285.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=927bp|location=Sequence derived from alignment at L-digitata_M_contig101285:2..928- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101285:2..928- >mRNA_L-digitata_M_contig101285.1.1 ID=mRNA_L-digitata_M_contig101285.1.1|Name=mRNA_L-digitata_M_contig101285.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=852bp|location=Sequence derived from alignment at L-digitata_M_contig101285:2..928- (Laminaria digitata LdigPH10_18mv male)back to top |