mRNA_L-digitata_M_contig101129.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 84.7 bits (208), Expect = 2.380e-17 Identity = 43/68 (63.24%), Postives = 53/68 (77.94%), Query Frame = 1
Query: 37 KLVYNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLR 240
K V+NNPL+ WRK+ E+P LA LARRVL+IP++ AQSER+FS AGLTV R L ENVE+LV+LR
Sbjct: 477 KKVFNNPLDRWRKKQLEYPLLAALARRVLAIPSSQAQSERVFSTAGLTVTPTRSRLLDENVELLVYLR 544
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 82.8 bits (203), Expect = 1.160e-16 Identity = 42/66 (63.64%), Postives = 50/66 (75.76%), Query Frame = 1
Query: 43 VYNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLR 240
V PLE WR +A+E+P LA LARRVL IPA AQSER+FS+AGL V K R +DPENV ++VFLR
Sbjct: 476 VRGKPLEWWRVKAREYPKLASLARRVLCIPAFQAQSERVFSSAGLVVTKTRARMDPENVGLMVFLR 541
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A7S3PTX0_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PTX0_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 1.540e-16 Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 46 YNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+N+PL+ W++ +E+P + LA+R+LS+PAT A SER+FS A L K+RGSL P+NV MLVFL+ N
Sbjct: 91 FNSPLQWWKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPDNVNMLVFLKEN 157
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A7S3PUA6_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3PUA6_9STRA) HSP 1 Score: 78.6 bits (192), Expect = 5.740e-16 Identity = 36/67 (53.73%), Postives = 51/67 (76.12%), Query Frame = 1
Query: 46 YNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+N+PL+ W++ +E+P + LA+R+LS+PAT A SER+FS A L K+RGSL P+NV MLVFL+ N
Sbjct: 158 FNSPLQWWKQNHREYPNIWMLAKRILSVPATSAPSERVFSVASLIATKKRGSLKPDNVNMLVFLKEN 224
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 79.3 bits (194), Expect = 7.980e-16 Identity = 40/66 (60.61%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 43 VYNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLR 240
VY +PL+ WR R +FP+LA LARRVL+IPAT A+SER+FS AG V K R +L P VE+LV LR
Sbjct: 219 VYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLR 284
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A4U5UIN6_COLLU (Zinc finger BED domain-containing protein 1 n=1 Tax=Collichthys lucidus TaxID=240159 RepID=A0A4U5UIN6_COLLU) HSP 1 Score: 78.6 bits (192), Expect = 1.500e-15 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 49 NNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+NPL W+ ++P+LARLARR LSIP T ++ER+FS AG+ VNK+R +LDP NV+ LVFL N
Sbjct: 236 SNPLSWWKTSGTKYPHLARLARRYLSIPGTSVRAERVFSTAGMIVNKKRSALDPANVDRLVFLANN 301
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A6G0IE79_LARCR (Uncharacterized protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IE79_LARCR) HSP 1 Score: 78.6 bits (192), Expect = 3.350e-15 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 49 NNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+NPL W+ ++P+LARLARR LSIP T ++ER+FS AG+ VNK+R +LDP NV+ LVFL N
Sbjct: 410 SNPLSWWKTSGTKYPHLARLARRYLSIPGTSVRAERVFSTAGMIVNKKRSALDPANVDRLVFLANN 475
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A6G0IJ18_LARCR (Uncharacterized protein n=5 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IJ18_LARCR) HSP 1 Score: 78.6 bits (192), Expect = 3.450e-15 Identity = 37/66 (56.06%), Postives = 49/66 (74.24%), Query Frame = 1
Query: 49 NNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+NPL W+ ++P+LARLARR LSIP T ++ER+FS AG+ VNK+R +LDP NV+ LVFL N
Sbjct: 452 SNPLSWWKTSGTKYPHLARLARRYLSIPGTSVRAERVFSTAGMIVNKKRSALDPANVDRLVFLANN 517
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: A0A1A8M216_9TELE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Nothobranchius pienaari TaxID=704102 RepID=A0A1A8M216_9TELE) HSP 1 Score: 73.9 bits (180), Expect = 6.790e-15 Identity = 36/66 (54.55%), Postives = 47/66 (71.21%), Query Frame = 1
Query: 49 NNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
++PL W+ + FP LA+LA +L IPAT SER+FSAAG V+K+R SL PE+V+ML FL CN
Sbjct: 77 DDPLIWWKANEQRFPTLAKLANSLLCIPATSTPSERLFSAAGNIVSKKRASLSPEHVDMLTFLHCN 142
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Match: UPI0019625210 (E3 SUMO-protein ligase ZBED1-like n=1 Tax=Perca fluviatilis TaxID=8168 RepID=UPI0019625210) HSP 1 Score: 75.1 bits (183), Expect = 1.730e-14 Identity = 40/78 (51.28%), Postives = 49/78 (62.82%), Query Frame = 1
Query: 13 ETNAKGETKLVYNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSERMFSAAGLTVNKRRGSLDPENVEMLVFLRCN 246
+T K + +NPL+ WR FP LARLA+R L IP T SER+FSAAGL VN+ R L PE+V+MLVF N
Sbjct: 177 DTYVKDSRSSLESNPLDWWRANQTRFPRLARLAQRYLCIPGTSVPSERVFSAAGLVVNRLRTRLTPEHVDMLVFFNKN 254 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101129.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101129.1.1 >prot_L-digitata_M_contig101129.1.1 ID=prot_L-digitata_M_contig101129.1.1|Name=mRNA_L-digitata_M_contig101129.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=82bp MFRDETNAKGETKLVYNNPLEMWRKRAKEFPYLARLARRVLSIPATLAQSback to top mRNA from alignment at L-digitata_M_contig101129:551..796- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101129.1.1 ID=mRNA_L-digitata_M_contig101129.1.1|Name=mRNA_L-digitata_M_contig101129.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101129:551..796- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101129:551..796- >mRNA_L-digitata_M_contig101129.1.1 ID=mRNA_L-digitata_M_contig101129.1.1|Name=mRNA_L-digitata_M_contig101129.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101129:551..796- (Laminaria digitata LdigPH10_18mv male)back to top |