mRNA_L-digitata_M_contig101104.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2E7I5V5_9PROT (Toluene tolerance protein n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I5V5_9PROT) HSP 1 Score: 218 bits (556), Expect = 8.000e-70 Identity = 109/159 (68.55%), Postives = 126/159 (79.25%), Query Frame = 1
Query: 1 DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRDG 477
DA + E+ RA+FR LFR+GFA++GIARF GRYWR AS +R EYL LFEDVIVNTWADRFS YSGQKFEV ATD P E VALV SLFFT P++PVR+EWRVAS+G++ KIVDVK EGISMA TQRDEFNSV+ NGR L AL+ +LR+ RDG
Sbjct: 48 DAEIMNEERRAQFRSLFREGFAIHGIARFALGRYWRGASKDEREEYLLLFEDVIVNTWADRFSLYSGQKFEVIDATDE-PTNGPEKVALVSSLFFTRPSAPVRIEWRVASQGNVIKIVDVKFEGISMANTQRDEFNSVIRNNGRKLSALLIQLRKMRDG 205
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A848W7N2_9PROT (ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W7N2_9PROT) HSP 1 Score: 215 bits (548), Expect = 1.450e-68 Identity = 101/155 (65.16%), Postives = 126/155 (81.29%), Query Frame = 1
Query: 13 TTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRDG 477
T E R EFR LFR+GFA+NGIARFV GRYWR AS+ADR EY+ LFEDVIVNTWADRFS+YSG+KFEV+ A +A AE+VA+V SLFF+ P +PVR++WRVAS+GD++KI DV +EGISMA TQRDEF+SV+ N + AL++ LR++RDG
Sbjct: 54 TPEMRRQEFRGLFREGFAINGIARFVLGRYWRGASEADRTEYMALFEDVIVNTWADRFSEYSGEKFEVQQAVNAPSAHKAENVAIVRSLFFSDPQTPVRIDWRVASRGDIYKITDVSVEGISMANTQRDEFSSVIRSNSGEISALLDILRKKRDG 208
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2E7PN01_9PROT (Toluene tolerance protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PN01_9PROT) HSP 1 Score: 214 bits (544), Expect = 5.330e-68 Identity = 107/159 (67.30%), Postives = 125/159 (78.62%), Query Frame = 1
Query: 1 DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRDG 477
+ +++E+ R +FR LFR+GFAV+GIARF GRYWR AS +R EYL LFEDVIVNTWADRFSQYSGQKFEV A D P E+VALV S FFTSPTSPV +EWRVAS+GD+ KIVDVKLEGISMA TQRD+FNS + NGR + A++E LR RDG
Sbjct: 48 NTEISSEERRDKFRNLFREGFAVDGIARFALGRYWRGASKEERKEYLFLFEDVIVNTWADRFSQYSGQKFEVLDAVDE-PSSGPENVALVLSQFFTSPTSPVIIEWRVASQGDIIKIVDVKLEGISMANTQRDDFNSYIRNNGRKVSAILERLRIMRDG 205
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2E8XTM8_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XTM8_9PROT) HSP 1 Score: 203 bits (516), Expect = 1.120e-63 Identity = 101/157 (64.33%), Postives = 125/157 (79.62%), Query Frame = 1
Query: 10 LTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADR-FSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRDG 477
TTE+ R +F+ LFR+GFAV+GIARFVAGRYWR+AS ++R EYL LFEDV+VN W+DR FSQY+GQ+F++ GA D TP S E VA+VES T+P + V++EWRVAS G+L KIVDVK+EG S+A TQ+DEF SKNGR A+IEELRRRRDG
Sbjct: 54 FTTEEQRLKFQELFREGFAVDGIARFVAGRYWRRASKSEREEYLVLFEDVVVNIWSDRLFSQYNGQQFDILGARDDTPANSQELVAVVESRIQTTPHTSVKVEWRVASLGELTKIVDVKVEGRSLAKTQQDEFTGFASKNGRRFSAIIEELRRRRDG 210
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A848WEV4_9PROT (ABC transporter substrate-binding protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WEV4_9PROT) HSP 1 Score: 194 bits (493), Expect = 3.270e-60 Identity = 90/154 (58.44%), Postives = 117/154 (75.97%), Query Frame = 1
Query: 13 TTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRD 474
T E R +FR LFR+GFA+ GIAR+V G W AS+ADRAEYL LFEDVIV TWADRFS YSGQKF + DA+ + E VA++ S+FFT P +P++++WRVAS+GD+FKI DV +EG+SMA TQRDEF+SV++ N + AL++ LR +RD
Sbjct: 54 TAETRRVQFRDLFREGFAIKGIARYVLGSGWSSASNADRAEYLTLFEDVIVTTWADRFSDYSGQKFTIENTVDASSAGAPEHVAIIRSIFFTDPQTPIQIDWRVASRGDIFKITDVVVEGVSMANTQRDEFSSVIAGNSGEISALLDILRDKRD 207
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2E3XGP1_9PROT (Uncharacterized protein n=2 Tax=Rhodospirillales TaxID=204441 RepID=A0A2E3XGP1_9PROT) HSP 1 Score: 162 bits (410), Expect = 1.330e-47 Identity = 72/154 (46.75%), Postives = 109/154 (70.78%), Query Frame = 1
Query: 10 LTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRR 471
+TT+ R +FR + R FA++ IARF GRYWRKAS++ R EYLKLFED+IV TWAD+FS Y G+K +V + DA +S V +V S++ + + ++WRVAS+G+++K+ DV +EGIS+A T+RDEF+SV+ +N + A ++ LR ++
Sbjct: 53 ITTDMRRKQFRDVMRQNFAIDSIARFALGRYWRKASESQRLEYLKLFEDLIVMTWADQFSTYEGEKLKVEESLDAASNQSRVKVVIVRSIWSIDKQTKIHVDWRVASQGNIYKVTDVMIEGISIARTKRDEFSSVIRRNNNEISAFLKTLREKK 206
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2S6QKH2_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium MarineAlpha12_Bin1 TaxID=2013107 RepID=A0A2S6QKH2_9PROT) HSP 1 Score: 160 bits (406), Expect = 5.030e-47 Identity = 76/159 (47.80%), Postives = 109/159 (68.55%), Query Frame = 1
Query: 16 TEQG------RAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRRRD 474
TE+G R FR + R+ FA+NGIA+F GRYWR ++ + EYL LFEDVIV TWAD+FS YSG+KFE++ A DA+ +E A+V S+F+ S +R++WRV++ DL+K+ DV ++GISM+ T RDEF SV+ N + AL++ LR +R+
Sbjct: 49 TEEGISNLVRRKRFRNICRESFAINGIAKFALGRYWRNTTENTKTEYLSLFEDVIVATWADKFSLYSGEKFEIQNALDASIRGRSERTAIVRSIFYLDTRSQIRVDWRVSNYEDLYKVTDVTIQGISMSKTTRDEFYSVIRGNAGDINALLKLLREKRN 207
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2D6T152_9PROT (Toluene tolerance protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T152_9PROT) HSP 1 Score: 141 bits (356), Expect = 2.200e-39 Identity = 75/155 (48.39%), Postives = 98/155 (63.23%), Query Frame = 1
Query: 1 DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEV-RGATDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELR 462
D L E+ EFRRLF +GF V I+RF GRYWR+AS R EY +LF D IVNT++DR QYSG+K V + DA ++ +V S PVRL+WR+ + FKIVDV +EG+SMA TQRD F+SV+ + G +E+L+EELR
Sbjct: 46 DKELPAERRLEEFRRLFIEGFDVRTISRFALGRYWRRASKNQRQEYGRLFSDYIVNTYSDRLGQYSGEKIVVGKTRNDAKRDR------IVSSKIVRPKGKPVRLDWRLRQRDQGFKIVDVVIEGVSMAITQRDAFSSVIRRGGGKVESLLEELR 194
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: B6IP24_RHOCS (Toluene tolerance transporter, putative n=1 Tax=Rhodospirillum centenum (strain ATCC 51521 / SW) TaxID=414684 RepID=B6IP24_RHOCS) HSP 1 Score: 141 bits (355), Expect = 3.210e-39 Identity = 72/157 (45.86%), Postives = 101/157 (64.33%), Query Frame = 1
Query: 1 DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKFEVRGA-TDATPEKSAEDVALVESLFFTSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRR 468
D +T EQ EFRRL + F V I RFV GRYW AS+A R EY+KLFE +IV +A RF+QY+G+ FEV + D T + A+V S PV+++WRV ++ ++IVDV +EG+SM+ TQR EF SV+ NG +++AL++ LR+R
Sbjct: 59 DPKVTDEQAVEEFRRLLNENFDVTTIGRFVLGRYWNTASEAQRQEYMKLFERMIVEVYAQRFNQYAGETFEVTASRADGTKD------AIVSSQVLRPNGPPVKVDWRVRARDGGYRIVDVVVEGVSMSVTQRSEFASVIESNGGNIDALLDALRKR 209
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Match: A0A2S6TX69_9PROT (Putative phospholipid-binding protein MlaC n=1 Tax=Alphaproteobacteria bacterium MarineAlpha3_Bin3 TaxID=2013069 RepID=A0A2S6TX69_9PROT) HSP 1 Score: 140 bits (352), Expect = 8.360e-39 Identity = 75/162 (46.30%), Postives = 105/162 (64.81%), Query Frame = 1
Query: 1 DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFEDVIVNTWADRFSQYSGQKF-----EVRGATDATPEKSAEDVALVESLFF-TSPTSPVRLEWRVASKGDLFKIVDVKLEGISMATTQRDEFNSVVSKNGRSLEALIEELRRR 468
D S T R FRRL + FA+ GIA+FV GR+WRKA+++++ EYL+LFED++V+T+ADRF++YSG+K EVRG DA LV ++ P+++ WRV K ++KIVD+ +EGISM TQ+ EF S + KNG SL L+ ELR+R
Sbjct: 59 DISKTERADR--FRRLMNENFAIKGIAKFVIGRHWRKATESEKKEYLQLFEDLLVDTYADRFAKYSGEKLVVNKSEVRGKGDA----------LVHTIMIRVDGAKPLKVTWRVRGKKGIYKIVDIMVEGISMVVTQKSEFASFIQKNGGSLGPLLIELRKR 208 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101104.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101104.1.1 >prot_L-digitata_M_contig101104.1.1 ID=prot_L-digitata_M_contig101104.1.1|Name=mRNA_L-digitata_M_contig101104.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=160bp DASLTTEQGRAEFRRLFRDGFAVNGIARFVAGRYWRKASDADRAEYLKLFback to top mRNA from alignment at L-digitata_M_contig101104:3..482+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101104.1.1 ID=mRNA_L-digitata_M_contig101104.1.1|Name=mRNA_L-digitata_M_contig101104.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=480bp|location=Sequence derived from alignment at L-digitata_M_contig101104:3..482+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101104:3..482+ >mRNA_L-digitata_M_contig101104.1.1 ID=mRNA_L-digitata_M_contig101104.1.1|Name=mRNA_L-digitata_M_contig101104.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=480bp|location=Sequence derived from alignment at L-digitata_M_contig101104:3..482+ (Laminaria digitata LdigPH10_18mv male)back to top |