mRNA_L-digitata_M_contig101071.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig101071.1.1
Unique NamemRNA_L-digitata_M_contig101071.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A2E5HJB2_9DELT (Cytochrome c domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A2E5HJB2_9DELT)

HSP 1 Score: 372 bits (955), Expect = 8.960e-122
Identity = 186/301 (61.79%), Postives = 225/301 (74.75%), Query Frame = 1
Query:   25 GLVWVFDA-ADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQGEVTVGSPLAFNTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDET 924
            G+V V D  A      ++L+PL  CF   +    VT+ C+PNQL G+T+HT  G   AYV SVAASP  PVSFNHN+QA+VSVID+ TE E  + T NLN L+ A Q       S GRRF++VPNAI FVN ++V IGYVT+AGSDIM R+ +   G +  GSP AFN A GQNPQG+VV+H   +  AY  NLISRDLSI+SFRDQ  ++ V ST VP+D +S+AFR+WKGKRFFNT+T IWSKEGWGSCQ CHPMGLTDNVT++FAAGPRQ++SLDGQ+ S+DPSDMRALNWTAIFDET
Sbjct:   60 GVVQVIDVGATSVASEIELAPLDPCFSGRIGDDVVTTACYPNQLYGITLHTTLGVPRAYVVSVAASPEGPVSFNHNVQAVVSVIDLTTEQEDSSRTVNLNTLV-ALQDXXXXXXSAGRRFLSVPNAIDFVNSEEVTIGYVTSAGSDIMFRVVWNEDGSLEGGSPQAFNIATGQNPQGLVVQHGQRDQRAYTGNLISRDLSIVSFRDQALVKNVTSTDVPTDPASDAFRVWKGKRFFNTSTGIWSKEGWGSCQGCHPMGLTDNVTFAFAAGPRQSVSLDGQFASNDPSDMRALNWTAIFDET 359          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A7Y5GRX6_9DELT (Beta-propeller fold lactonase family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y5GRX6_9DELT)

HSP 1 Score: 247 bits (631), Expect = 1.490e-70
Identity = 144/311 (46.30%), Postives = 189/311 (60.77%), Query Frame = 1
Query:   10 DEGREGLVWVFDA-ADGQKRTVKLSPLMSC-FEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVPAL--TQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEY-TAQGEVTVGSPLAFNTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDETA 927
            D GR+GLV+ F   A   + T+ L P+ +  F+ P +   +  GCFPNQL+ +    A  K   YV    A P  PV FN NMQ  VSV +++++ E+P    T NLNAL+K Q A+  G     R+F+N P  IAF+    +A  YVTA GS+++LR+ + T +G+V VGS   F+  VG  PQG  V H       + ANLI R LS +    Q  + T +STP+P D + E   IW GKRFFNT+T  WSKE WGSC +CHP GL+DNVTW FAAGPRQ+ SLDG ++  +P+D R  NWTAIFDE A
Sbjct:  405 DFGRKGLVYYFGTGATEVEGTIDLLPIQNVGFDDP-STKKLPQGCFPNQLSSI----ALRKGRGYVVHTCAGPRGPVQFNVNMQGAVSVFEIDSKQELPDKGGTVNLNALVKNQSAENGG-----RQFINQPTDIAFIPNKTIA--YVTAGGSNLILRVNFATTKGKVEVGSAFNFHVPVGGFPQGTAVSHDGKRF--FSANLIGRSLSAVVVATQSVVATTQSTPLPLDGTDE-HTIWNGKRFFNTSTKRWSKESWGSCVSCHPGGLSDNVTWHFAAGPRQSTSLDGSFSKTNPADQRIFNWTAIFDEVA 700          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A1M3N0W5_9DELT (Uncharacterized protein n=1 Tax=Myxococcales bacterium 68-20 TaxID=1895795 RepID=A0A1M3N0W5_9DELT)

HSP 1 Score: 192 bits (487), Expect = 1.190e-51
Identity = 131/342 (38.30%), Postives = 175/342 (51.17%), Query Frame = 1
Query:   10 DEGREGLVWVFDAADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPV-------------SFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYT---AQGEVTVGSP----LAFNTA------VGQNPQGIVVRHRSSEAA-AYVANLISRDLSIISFRDQR-------TLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSK--EGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDETA 927
            D  + GLV+    +D    T++L+PL     A  NG    +GC+PNQL  +T+       YAYV+S+ ASP  PV             +       +VSVID+  + E    T +L+A         +  D   RR+  VP  I FV    V  GYV A G+D + R+ Y    A     V SP    +  N A       GQNP GI   ++ +    A+VAN +SR++S+I F  Q        +   V ++ +P + S+E  RI KGKRFFNTAT  WS   +GW  CQACH  GL+DNVTW FA GPRQ+ SL+G ++  DP D R  NWTAIFDE A
Sbjct:  250 DVAKAGLVYKVKLSDKSVSTIRLAPLADMGFADSNGGK--AGCYPNQLQSITIQ----DRYAYVSSICASPKGPVGVVVPQGGQPNVANVKTTTHGVVSVIDLSADKEATGATASLHARFDEHFTANNVADDGSRRYPAVPADIGFVRGGQV--GYVVANGADSVFRVRYDVAQASAITEVSSPTQPFINLNPAGIAADKSGQNPIGIATPNQDAHKRFAFVANDVSRNVSVIDFNTQAIAGGASDSAVVVRASALPGENSTED-RIRKGKRFFNTATGRWSLKGQGWNGCQACHMDGLSDNVTWFFARGPRQSTSLEGSFSKKDPKDQRLFNWTAIFDEVA 582          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A7Y4ZF07_9DELT (Uncharacterized protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y4ZF07_9DELT)

HSP 1 Score: 182 bits (461), Expect = 4.300e-48
Identity = 125/338 (36.98%), Postives = 175/338 (51.78%), Query Frame = 1
Query:   10 DEGREGLVWVFDAADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPV------------SFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQ----GEVTVGSPLAFN--------TAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTL------RTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSK--EGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDETA 927
            D  + GLV+    AD    T++L+P+         G   T+GC+PNQL  +TV+      +AYV+SV ASP  P+            +        VSVID+ T+ E  A T +L+A       D    D   RR+   P  +AFV     A+GYV A G+D   R+ Y A+     EV   + L  N         A G+NP G+ V + + +  A+VAN + R+L+++    Q  L      +  ES+  P+   SEA    +GKRFFNT  A WS   +GWG+CQ+CH  G +DN++W FA GPRQ+ SLDG ++  +PSD R  NWTAIFDE A
Sbjct:  249 DRAKAGLVYKIKLADKSVSTIRLNPIADMGFKDSKGQ--TAGCYPNQLQSITVN----GNFAYVSSVCASPKGPIGVVATVTPPDVSNVKTTTAGAVSVIDLRTDQEA-AGTASLHARFDKLFTDKAAPDDATRRYPLAPVDMAFVPGS--AVGYVVANGTDAAFRVRYDAEKGDISEVGSSTQLFVNLNPAGLAAAAQGKNPIGMAVSN-TGKKFAFVANDVGRNLTVVDLNAQGILGGTEAPKVFESSAQPA-AGSEAEARLRGKRFFNTGLARWSLKGQGWGACQSCHMDGYSDNISWYFARGPRQSTSLDGSFSKKNPSDQRVFNWTAIFDEVA 575          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A7Y5KY88_9DELT (Cytochrome c domain-containing protein n=1 Tax=Polyangiaceae bacterium TaxID=2268199 RepID=A0A7Y5KY88_9DELT)

HSP 1 Score: 172 bits (436), Expect = 1.250e-44
Identity = 128/354 (36.16%), Postives = 175/354 (49.44%), Query Frame = 1
Query:   10 DEGREGLVWVFDAADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSF----------------------NHNMQALVSVIDVETEAEVPALTQNLN----------ALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEY-TAQGEVT-VGSPLAF--------NTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTS----SEAFRIWKGKRFFNTATAIWSK--EGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDETA 927
            D  + G+V+  D AD   +T++L P+        NG P  +GCF NQ+  +T+H      +AYVTS  ASP  P+                        N N+Q   +  DV+          NLN          AL KA   D+        R  ++P  +AF   ++    Y+TA G+D + R+    A GE+T VGS   F        +T + +NP GI +    ++A  +V+N  S+D++ +SF  Q T+  +  TPV   +S     EA R  +GKRFFNT    WS   EGWGSC ACH  GLTDNVTW F  GPRQ+ SLDG + S+DP+D R  NWT IFDE A
Sbjct:  271 DVSKAGIVYRIDPADYTVQTIELPPVTDTGFDDHNGAP--TGCFVNQVGSVTLH----GNFAYVTSTCASPKGPLGVFTGTGPCTVVTQEQVCGVGGTCNANLQCNPNPTDVKASTHPALSVVNLNNDTATTAVLDALFKAPGVDS-------ARIPHLPTDLAFFEENNA---YITAMGTDAVFRVGIDAATGEITDVGSSNDFINLRVDASDTTI-RNPVGIAIVD-GADAFGFVSNDGSQDVTAVSFGTQ-TIAGLPDTPVIESSSVLPTGEALRRLRGKRFFNTGLGRWSLAGEGWGSCAACHVDGLTDNVTWYFGRGPRQSTSLDGSFASNDPTDQRVFNWTGIFDEVA 605          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A521U187_9DELT (Cytochrome c domain-containing protein n=1 Tax=Myxococcaceae bacterium TaxID=2484252 RepID=A0A521U187_9DELT)

HSP 1 Score: 169 bits (429), Expect = 1.160e-43
Identity = 122/323 (37.77%), Postives = 163/323 (50.46%), Query Frame = 1
Query:   10 DEGREGLVWVFDAADGQKRTVKLSPLMSCFEAPVN-------GTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDG--DDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQ---GEVTVGSPLAF-----NTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSK--EGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDE 921
            D  R GLV+ F+A  G               AP+N            +GCFPNQL    +         +VTSV  SP  PV+   N+ A +S+I++ T          L    + + A T     D+  RRF  VPN I+F+      + YV++ GSD + R+E+ A     +V  G+ L F      TA G+ P GI V +    A A   N  +R+LS+I    Q T   V+S P P+  S E  R+  G+RFF T  A WS+  +GWGSC+ CHP GLTDNVTW+FAAGPRQT SLDG ++    +  R LNWT I DE
Sbjct:  318 DVNRGGLVYRFNAGTG------------AIAAPINLQAFRTTSASTEAGCFPNQLYAAAIK----GDRLFVTSVCESPRRPVNSQQNLFAAISLINLTTNLPDTDHHVLLTREFETRYAATATAVPDTNARRFPLVPNDISFLPMGGGNVAYVSSYGSDAIFRVEFNADFSLAQVGQGTALHFIGLNAGTAAGRLPIGIAVANTVG-ARAVALNENTRNLSLIDLSAQATAAVVQSAPAPTAASPED-RVNIGRRFFVTGLARWSRNGQGWGSCEGCHPDGLTDNVTWTFAAGPRQTTSLDGTFDRSG-THQRVLNWTGILDE 621          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: UPI0019F84101 (PE-PGRS family protein PE_PGRS18 n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=UPI0019F84101)

HSP 1 Score: 168 bits (425), Expect = 2.260e-43
Identity = 109/278 (39.21%), Postives = 160/278 (57.55%), Query Frame = 1
Query:  130 SGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYT-AQGEVTVGS-PL---AFNTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFR--DQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIW-------SKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDE 921
            +G +PNQ+  + V   F    AY+ +V ASP  PV FN N QALV ++D  T  +   LT NL+  + +Q   T       + F+ +P +IAF  ++DV  GYV +A S++++R+    A G ++V + PL     +  VG+NP+GIV+ +  ++  AYV N +SRD+++I      ++ + T+ S P+P+  S E   +  GK  +NTA   +       S EGW SC ACHP GL+DNV W FAAGPR+TIS   Q+       MRALNW+ IFDE
Sbjct:  281 TGAYPNQMQAIAVKNGF----AYLPNVGASPNGPVRFNVNTQALVHILDTNTNVDT-GLTINLHKAVASQPEGTR------KLFLAIPWSIAFKTKEDV--GYVVSAASNVVVRVHVDPATGAMSVDTNPLDNRVLDINVGRNPRGIVINN--NDTRAYVMNYVSRDVTVIDITRFPEQIMATMRSAPLPAAGSPEEL-VLVGKELYNTAVGEFTDSIGNMSSEGWQSCAACHPFGLSDNVVWIFAAGPRRTIS---QHTDFAGGVMRALNWSGIFDE 539          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A356TQM4_9DELT (Uncharacterized protein n=2 Tax=Myxococcales TaxID=29 RepID=A0A356TQM4_9DELT)

HSP 1 Score: 167 bits (423), Expect = 4.970e-43
Identity = 120/319 (37.62%), Postives = 165/319 (51.72%), Query Frame = 1
Query:   10 DEGREGLVWVFDAADGQKR-TVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVPALTQNLNA--LIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQGEVT-VGSPLAFNTAVGQ----------NPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYN-SDDPSDMRALNWTAIFDE 921
            D  R GLV V+  +D +    + LSP+ S F AP  G  V +   PNQL+ +++    G+ Y  VTS++ SPAAPV FN N+Q +V V D+ +  E+   T ++N   L++  +ADT       + F+     +AF+      IGY  + G+D + R+ +  + + T +GS L     V             P GI   H    A  YV   +SR L +I    Q    TVE+T    +T+  A  I +G RFF T    WS  GW SC +CHP GLTDN+TW F AGPRQT SLDG ++  D P   R  NWT IFDE
Sbjct:  226 DTSRSGLVRVYRTSDLEPDGPITLSPIDSGF-APDGGESVMAS--PNQLSSVSIQD--GRIY--VTSISVSPAAPVRFNLNVQPIVYVADIASREELREATGSVNLARLVREAEADT-------KLFLADTIDLAFIGESG-GIGYALSRGADAVQRVVFDRETDATSIGSTLNLQIDVNAAPAGADAGCLTPTGITTAHDGPRA--YVNCWLSRRLGVIDLSMQALSTTVEATS--PNTAPAAVEIARGARFFFTGRGRWSDNGWSSCGSCHPGGLTDNITWRFPAGPRQTTSLDGSFSHGDGPQVQRVFNWTGIFDE 525          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A2W5U424_9DELT (Uncharacterized protein n=1 Tax=Archangium gephyra TaxID=48 RepID=A0A2W5U424_9DELT)

HSP 1 Score: 167 bits (423), Expect = 5.890e-43
Identity = 118/316 (37.34%), Postives = 159/316 (50.32%), Query Frame = 1
Query:    1 ETEDEGREGLVWVFD-AADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEV--PALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQGEVTVGSPLAF------NTAVGQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDE 921
            E  D GR+G V     A +    TV L+P+          T    GC PNQL  + ++   G+  AYV+ V A+P  PV+   N+ A VSVID+ T+ E   P  T  L+ LI AQ   T          + VP  I F  R +  +GYV +   D M R+ Y A G +T+G    F       T   + P G+ V H ++   AYVAN   R L+++    Q     + S   P+  S +A  +  G +FF T T  WS     SC +CHP GL+D +TW FAAGPRQ+ +LDG Y  +DP+D R LNWT IFDE
Sbjct:  256 EASDTGRQGRVQEISLATNAVTSTVSLNPIAD--------TGFGVGCSPNQLFSIAINN--GR--AYVSHVCAAPKGPVNKFTNLFAAVSVIDLATKTEDLGPTGTAALSKLINAQGTATSN-------LLGVPIGIDF--RPNTNVGYVISQAGDTMQRVHYRASGSITLGPDSGFAQINTRGTGGIKVPLGLAVAHTAN--FAYVANWADRSLTVVDLASQVFDSDIVSADKPAVNSRDA-HVLSGIKFFFTGTGRWSDRSVNSCGSCHPDGLSDQLTWVFAAGPRQSTALDGTYAKNDPTDQRVLNWTGIFDE 547          
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Match: A0A0F6W9U5_9DELT (Cytochrome c domain-containing protein n=2 Tax=Sandaracinus amylolyticus TaxID=927083 RepID=A0A0F6W9U5_9DELT)

HSP 1 Score: 164 bits (416), Expect = 5.780e-42
Identity = 116/318 (36.48%), Postives = 163/318 (51.26%), Query Frame = 1
Query:   10 DEGREGLVW-VFDAADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQLNGLTVHTAFGKTYAYVTSVAASPAAPV-----SFNHNMQALVSVIDVETEAEVPALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAAGSDIMLRLEYTAQGEVT-VGSPLAFNTAV-----GQNPQGIVVRHRSSEAAAYVANLISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIWSKEG--WGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALNWTAIFDE 921
            D  ++G+V+    +A     T+ LSP+       V+    T+GCFPNQL  +    A      +V ++ ASP  P      +F   +   +  IDV T  E+P     L      +       +   RR   +   +AF+    V  GYVTA GSD + R  Y   G VT VGS  A N+ +     G+ P GI +  R +   A V N  +R++SI++F+ Q  +  V+ T +PS+ S EA  + +G+R F T    WS  G  W SC++CH  GLTDNVTW FA GPRQ+ SLDG Y+S DP++ R  NWT IFDE
Sbjct:  266 DVAKQGIVYRAALSAPSVVSTITLSPVADT--GFVDSVGNTTGCFPNQLQTV----ALDSGRLHVGALCASPRGPTGGAVPNFKTEVHTAIFAIDVATGTELPESRLLLTRAFTDRYDAASTPEDASRRIPLIATDLAFIRAGRV--GYVTAYGSDAVFRFVYGDDGRVTEVGS--AANSFINLAPGGRLPLGIAIA-RGATVQALVLNEATRNVSILAFQTQSVVSAVQVTAMPSEGSDEAHAL-EGRRLFVTGLGRWSLNGQSWNSCESCHGDGLTDNVTWFFARGPRQSTSLDGSYDSADPTERRVFNWTGIFDE 571          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101071.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E5HJB2_9DELT8.960e-12261.79Cytochrome c domain-containing protein n=1 Tax=Myx... [more]
A0A7Y5GRX6_9DELT1.490e-7046.30Beta-propeller fold lactonase family protein n=1 T... [more]
A0A1M3N0W5_9DELT1.190e-5138.30Uncharacterized protein n=1 Tax=Myxococcales bacte... [more]
A0A7Y4ZF07_9DELT4.300e-4836.98Uncharacterized protein n=1 Tax=Polyangiaceae bact... [more]
A0A7Y5KY88_9DELT1.250e-4436.16Cytochrome c domain-containing protein n=1 Tax=Pol... [more]
A0A521U187_9DELT1.160e-4337.77Cytochrome c domain-containing protein n=1 Tax=Myx... [more]
UPI0019F841012.260e-4339.21PE-PGRS family protein PE_PGRS18 n=1 Tax=Anaerolin... [more]
A0A356TQM4_9DELT4.970e-4337.62Uncharacterized protein n=2 Tax=Myxococcales TaxID... [more]
A0A2W5U424_9DELT5.890e-4337.34Uncharacterized protein n=1 Tax=Archangium gephyra... [more]
A0A0F6W9U5_9DELT5.780e-4236.48Cytochrome c domain-containing protein n=2 Tax=San... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig101071contigL-digitata_M_contig101071:6..932 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog391625.PPSIR1_37624
PFAMsLactonase
Model size927
Max annot lvl2|Bacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue4.86e-42
EggNOG OGsCOG1858@1|root,COG3391@1|root,COG1858@2|Bacteria,COG3391@2|Bacteria
Descriptionamine dehydrogenase activity
Cds size927
COG categoryCO
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406613.9384892-CDS-L-digitata_M_contig101071:5..9321682406613.9384892-CDS-L-digitata_M_contig101071:5..932Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig101071 6..932 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig101071.1.1prot_L-digitata_M_contig101071.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig101071 6..932 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig101071.1.1

>prot_L-digitata_M_contig101071.1.1 ID=prot_L-digitata_M_contig101071.1.1|Name=mRNA_L-digitata_M_contig101071.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=309bp
ETEDEGREGLVWVFDAADGQKRTVKLSPLMSCFEAPVNGTPVTSGCFPNQ
LNGLTVHTAFGKTYAYVTSVAASPAAPVSFNHNMQALVSVIDVETEAEVP
ALTQNLNALIKAQQADTDGDDSIGRRFMNVPNAIAFVNRDDVAIGYVTAA
GSDIMLRLEYTAQGEVTVGSPLAFNTAVGQNPQGIVVRHRSSEAAAYVAN
LISRDLSIISFRDQRTLRTVESTPVPSDTSSEAFRIWKGKRFFNTATAIW
SKEGWGSCQACHPMGLTDNVTWSFAAGPRQTISLDGQYNSDDPSDMRALN
WTAIFDETA
back to top

mRNA from alignment at L-digitata_M_contig101071:6..932+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig101071.1.1 ID=mRNA_L-digitata_M_contig101071.1.1|Name=mRNA_L-digitata_M_contig101071.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=927bp|location=Sequence derived from alignment at L-digitata_M_contig101071:6..932+ (Laminaria digitata LdigPH10_18mv male)
GAGACGGAGGATGAGGGCCGCGAGGGCCTGGTCTGGGTCTTTGACGCCGC GGATGGCCAAAAGCGCACCGTGAAGCTGTCGCCGCTCATGAGCTGCTTCG AGGCCCCCGTGAACGGCACGCCCGTGACCAGCGGTTGTTTTCCCAACCAG CTCAACGGTCTGACCGTACACACCGCCTTTGGAAAGACCTACGCCTACGT GACCTCGGTCGCGGCATCGCCTGCCGCGCCGGTCAGCTTCAACCACAACA TGCAGGCCCTGGTGTCCGTCATCGATGTCGAGACGGAGGCGGAGGTCCCG GCGCTCACCCAGAACCTCAACGCGCTCATCAAGGCCCAGCAGGCGGATAC GGACGGCGATGACAGCATCGGTCGCCGCTTCATGAATGTGCCCAACGCCA TCGCCTTCGTGAACCGCGACGATGTGGCCATCGGCTACGTCACCGCGGCG GGCTCCGACATCATGCTGCGCCTGGAGTACACCGCCCAGGGCGAGGTCAC GGTGGGCTCACCGCTGGCCTTCAATACCGCGGTGGGGCAGAACCCCCAGG GCATCGTGGTGCGCCATCGCTCAAGTGAAGCGGCCGCTTATGTCGCCAAT CTCATCAGTCGCGATCTCTCCATTATCTCCTTTCGTGACCAGCGAACGCT GCGCACGGTTGAATCCACCCCTGTGCCCTCAGATACGAGCTCCGAGGCCT TTCGGATCTGGAAGGGCAAACGATTCTTCAATACCGCCACCGCGATCTGG TCCAAGGAGGGCTGGGGCAGCTGTCAGGCCTGCCACCCTATGGGCCTCAC CGATAACGTGACCTGGAGCTTCGCGGCCGGACCGCGCCAGACCATCTCAT TGGATGGCCAGTACAATAGTGATGACCCCAGCGACATGCGGGCCCTCAAC TGGACCGCGATCTTCGACGAGACGGCG
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig101071:6..932+

>mRNA_L-digitata_M_contig101071.1.1 ID=mRNA_L-digitata_M_contig101071.1.1|Name=mRNA_L-digitata_M_contig101071.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=927bp|location=Sequence derived from alignment at L-digitata_M_contig101071:6..932+ (Laminaria digitata LdigPH10_18mv male)
GAGACGGAGGATGAGGGCCGCGAGGGCCTGGTCTGGGTCTTTGACGCCGC
GGATGGCCAAAAGCGCACCGTGAAGCTGTCGCCGCTCATGAGCTGCTTCG
AGGCCCCCGTGAACGGCACGCCCGTGACCAGCGGTTGTTTTCCCAACCAG
CTCAACGGTCTGACCGTACACACCGCCTTTGGAAAGACCTACGCCTACGT
GACCTCGGTCGCGGCATCGCCTGCCGCGCCGGTCAGCTTCAACCACAACA
TGCAGGCCCTGGTGTCCGTCATCGATGTCGAGACGGAGGCGGAGGTCCCG
GCGCTCACCCAGAACCTCAACGCGCTCATCAAGGCCCAGCAGGCGGATAC
GGACGGCGATGACAGCATCGGTCGCCGCTTCATGAATGTGCCCAACGCCA
TCGCCTTCGTGAACCGCGACGATGTGGCCATCGGCTACGTCACCGCGGCG
GGCTCCGACATCATGCTGCGCCTGGAGTACACCGCCCAGGGCGAGGTCAC
GGTGGGCTCACCGCTGGCCTTCAATACCGCGGTGGGGCAGAACCCCCAGG
GCATCGTGGTGCGCCATCGCTCAAGTGAAGCGGCCGCTTATGTCGCCAAT
CTCATCAGTCGCGATCTCTCCATTATCTCCTTTCGTGACCAGCGAACGCT
GCGCACGGTTGAATCCACCCCTGTGCCCTCAGATACGAGCTCCGAGGCCT
TTCGGATCTGGAAGGGCAAACGATTCTTCAATACCGCCACCGCGATCTGG
TCCAAGGAGGGCTGGGGCAGCTGTCAGGCCTGCCACCCTATGGGCCTCAC
CGATAACGTGACCTGGAGCTTCGCGGCCGGACCGCGCCAGACCATCTCAT
TGGATGGCCAGTACAATAGTGATGACCCCAGCGACATGCGGGCCCTCAAC
TGGACCGCGATCTTCGACGAGACGGCG
back to top