mRNA_L-digitata_M_contig101022.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: D7FXS4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXS4_ECTSI) HSP 1 Score: 117 bits (292), Expect = 8.630e-29 Identity = 61/78 (78.21%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVREGRREG 234
+ALPIFLGNLVPSWLAVILSVSLVLFFGEI PSAVFTGK +LAIA+GMSW V LM +LGPVAWPI+W L R EG
Sbjct: 279 EALPIFLGNLVPSWLAVILSVSLVLFFGEIFPSAVFTGKNQLAIASGMSWLVYTLMMVLGPVAWPIAWMLDRVLGIEG 356
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A6H5KPI7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPI7_9PHAE) HSP 1 Score: 115 bits (289), Expect = 2.720e-28 Identity = 60/78 (76.92%), Postives = 66/78 (84.62%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVREGRREG 234
+ALPIFLGNLVPSWLAVILSV+LVLFFGEI PSAVFTGK +LAIA+GMSW V LM +LGPVAWPI+W L R EG
Sbjct: 276 EALPIFLGNLVPSWLAVILSVTLVLFFGEIFPSAVFTGKNQLAIASGMSWLVYTLMMVLGPVAWPIAWMLDRVLGIEG 353
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A7S0NQB0_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0NQB0_9EUKA) HSP 1 Score: 87.4 bits (215), Expect = 8.200e-20 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVR 216
+ALP+FL LVPSW A+++SV+ VLF GEI+P+A+FTG +L IAA +S V G MF L P+AWP++W L R
Sbjct: 60 EALPLFLDELVPSWAAILISVTAVLFLGEIMPAAIFTGPAKLRIAAALSSLVWGCMFFLSPLAWPLAWMLDR 131
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A812S5I8_9DINO (CBSDUF5 protein n=5 Tax=Symbiodinium TaxID=2949 RepID=A0A812S5I8_9DINO) HSP 1 Score: 91.7 bits (226), Expect = 8.870e-20 Identity = 46/67 (68.66%), Postives = 55/67 (82.09%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPIS 201
+ALP+FL +VPSWLAV+LSVSLVL FGEI+PSAVFTG +L++AA S VS MFLL PVAWPI+
Sbjct: 148 EALPLFLDQIVPSWLAVVLSVSLVLMFGEIIPSAVFTGSEQLSMAARFSGLVSAFMFLLSPVAWPIA 214
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A812XK85_SYMPI (CBSDUF5 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812XK85_SYMPI) HSP 1 Score: 90.9 bits (224), Expect = 1.680e-19 Identity = 46/67 (68.66%), Postives = 56/67 (83.58%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPIS 201
+ALP+FL +VPSWLAV+LSVSLVL FGEI+PSAVFTG +L++AA S VS +MFLL PVAWPI+
Sbjct: 491 EALPLFLDQVVPSWLAVLLSVSLVLMFGEIIPSAVFTGSEQLSMAARFSGLVSAIMFLLTPVAWPIA 557
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A7S3XXY8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XXY8_HETAK) HSP 1 Score: 85.9 bits (211), Expect = 8.320e-19 Identity = 42/80 (52.50%), Postives = 56/80 (70.00%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVREGRREGRR 240
+ALPIFL LVP W+AV+LSVSL+L FGEI+PSA+FTG +L++ + W V LM + P+AWP+ W L R EG +
Sbjct: 70 EALPIFLDELVPEWVAVLLSVSLLLIFGEILPSAIFTGPRQLSVVSNCIWLVRVLMGVFLPLAWPLGWVLDRVVGHEGMK 149
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A7S0IV86_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IV86_9EUKA) HSP 1 Score: 80.9 bits (198), Expect = 8.250e-18 Identity = 41/72 (56.94%), Postives = 55/72 (76.39%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVR 216
+ALPIFL LVP +AV+++V+ VLF GEI+P+AVFTG +L IAA ++ FV G M LL P+AWP++W L R
Sbjct: 11 EALPIFLDALVPPLIAVLIAVTAVLFVGEIIPAAVFTGPNKLQIAASLAPFVWGAMALLSPLAWPLAWLLDR 82
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A6U4FEE5_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4FEE5_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 1.280e-17 Identity = 42/70 (60.00%), Postives = 57/70 (81.43%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWAL 210
+ALP+FL LVPSWLA++LSV+LVLFFGEI+PSA+FTG +L IAA M+ V +M +L P+A+PI++ L
Sbjct: 88 EALPLFLDALVPSWLAIVLSVTLVLFFGEIIPSAIFTGPNQLRIAAAMAPVVKIIMLVLSPIAYPIAYCL 157
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A7S1QD79_ALECA (Hypothetical protein n=1 Tax=Alexandrium catenella TaxID=2925 RepID=A0A7S1QD79_ALECA) HSP 1 Score: 84.7 bits (208), Expect = 2.380e-17 Identity = 45/67 (67.16%), Postives = 53/67 (79.10%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPIS 201
+ALP+FL +VPSWLAVILSV+LVL FGEI+PSAVFTG +L IAA + VS L LL PVAWPI+
Sbjct: 155 EALPLFLDAVVPSWLAVILSVTLVLMFGEIIPSAVFTGSEQLRIAAKFAPIVSALQCLLAPVAWPIA 221
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Match: A0A4D9CSI6_9STRA (CNNM transmembrane domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSI6_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.320e-17 Identity = 48/87 (55.17%), Postives = 61/87 (70.11%), Query Frame = 1
Query: 1 QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWFVSGLMFLLGPVAWPISWALVR------EGRREGRRG 243
+ALP+ LG LVP ++AVILSV+ VLFFGEI+PSAVF G +L + + M+ V GL+FL P+AWPIS AL + EG REG G
Sbjct: 158 EALPLALGELVPGYIAVILSVTAVLFFGEILPSAVFLGPNQLKLGSRMTPVVWGLIFLFFPIAWPISLALDKVLGGGSEGGREGEDG 244 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig101022.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig101022.1.1 >prot_L-digitata_M_contig101022.1.1 ID=prot_L-digitata_M_contig101022.1.1|Name=mRNA_L-digitata_M_contig101022.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=82bp QALPIFLGNLVPSWLAVILSVSLVLFFGEIVPSAVFTGKGRLAIAAGMSWback to top mRNA from alignment at L-digitata_M_contig101022:208..453+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig101022.1.1 ID=mRNA_L-digitata_M_contig101022.1.1|Name=mRNA_L-digitata_M_contig101022.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101022:208..453+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig101022:208..453+ >mRNA_L-digitata_M_contig101022.1.1 ID=mRNA_L-digitata_M_contig101022.1.1|Name=mRNA_L-digitata_M_contig101022.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=246bp|location=Sequence derived from alignment at L-digitata_M_contig101022:208..453+ (Laminaria digitata LdigPH10_18mv male)back to top |