mRNA_L-digitata_M_contig100992.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A2E7I5K3_9PROT (Adenylosuccinate lyase n=2 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A2E7I5K3_9PROT) HSP 1 Score: 277 bits (709), Expect = 1.000e-89 Identity = 134/168 (79.76%), Postives = 154/168 (91.67%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGS 504
RNPILTENLTGLARVVR+AV PA+ENVALWHERDISHSSVER GPDATVTLDFAL RLTGVV+K+++YP+ M ANME+LGGL+HSQRVLLALTQAG+SRED+Y AVQRNAMKVW LPE +R+GAFLSFL+ DE+VSA IS ++LA SFD+GYHTKHVD IF+RVFG+
Sbjct: 269 RNPILTENLTGLARVVRSAVVPAMENVALWHERDISHSSVERFIGPDATVTLDFALARLTGVVDKLLVYPETMVANMERLGGLIHSQRVLLALTQAGMSREDAYEAVQRNAMKVWDLPEGDRDGAFLSFLKDDEKVSALISGDNLAESFDLGYHTKHVDAIFSRVFGA 436
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A2E7PJH6_9PROT (Adenylosuccinate lyase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PJH6_9PROT) HSP 1 Score: 276 bits (706), Expect = 2.840e-89 Identity = 134/168 (79.76%), Postives = 154/168 (91.67%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGS 504
RNPILTENLTGLARVVR+AV PA+ENVALWHERDISHSSVER+ GPDATVTLDFAL+RLT VV+K+++YP+ M AN+EKLGGL+HSQRVLLALTQAG+SRED+Y AVQRNAM+VW LPEAEREGAFLSFLQ D+ VS I+ +DLA SFD+GYHTKH+DTIF RVFG+
Sbjct: 269 RNPILTENLTGLARVVRSAVVPAMENVALWHERDISHSSVERIIGPDATVTLDFALMRLTSVVDKLLVYPETMMANVEKLGGLIHSQRVLLALTQAGMSREDAYQAVQRNAMQVWALPEAEREGAFLSFLQGDKAVSKLIAGDDLAESFDLGYHTKHLDTIFERVFGA 436
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A7C7KMH1_9PROT (Adenylosuccinate lyase n=1 Tax=Kiloniellaceae bacterium TaxID=2480820 RepID=A0A7C7KMH1_9PROT) HSP 1 Score: 251 bits (640), Expect = 7.280e-80 Identity = 128/167 (76.65%), Postives = 141/167 (84.43%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFG 501
RNP+LTENLTGLARVVRAAV PALENVALWHERDISHSSVERMFGPDATVTLDFAL RL GV+EK++IYP+AM N+++LGGLVHSQRVLLALTQAG+SRED+Y VQRNAMKVWG EG FL+ L++D EVS I A L A FD YHTKHVDTIF RVFG
Sbjct: 232 RNPVLTENLTGLARVVRAAVVPALENVALWHERDISHSSVERMFGPDATVTLDFALNRLAGVIEKLLIYPEAMQQNLDQLGGLVHSQRVLLALTQAGVSREDAYRLVQRNAMKVWG-----GEGDFLALLKADPEVSGSIEAAALEACFDPAYHTKHVDTIFRRVFG 393
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A848W455_9PROT (Adenylosuccinate lyase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848W455_9PROT) HSP 1 Score: 250 bits (639), Expect = 3.560e-79 Identity = 123/169 (72.78%), Postives = 146/169 (86.39%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGSA 507
RNPILTENLTG+AR+VRAA PA+EN+ALWHERDISHSSVER+ GPDAT+ LDFAL RLTGVVEK+++YPDAM N+++LGGLVHSQRV+LALTQAG++RED+Y AVQRNAM+VW L EA+R GAF FL+ D EV+AK+ L A FDMG+HTKHVDTIF RVF +A
Sbjct: 269 RNPILTENLTGIARLVRAAAIPAMENIALWHERDISHSSVERVNGPDATIALDFALGRLTGVVEKLVVYPDAMQNNLDRLGGLVHSQRVMLALTQAGMAREDAYQAVQRNAMRVWELAEADRPGAFQRFLKDDGEVTAKLDGAALDALFDMGHHTKHVDTIFNRVFVAA 437
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A3D3UDQ1_9PROT (Adenylosuccinate lyase (Fragment) n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A3D3UDQ1_9PROT) HSP 1 Score: 243 bits (619), Expect = 3.460e-78 Identity = 120/168 (71.43%), Postives = 145/168 (86.31%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGA-FLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFG 501
RNP+LTENLTGLAR+VRAAV PALENVALWHERDISHSSVERM GPDATVTLDFAL+RL G+++ +++YP+ M AN+++LGGL+HSQRVLLALTQAG+SRED+Y VQRNAMKVW RE A FL+ L++D EVSA + AE+LA FD+GYHTKHV+T+F R+FG
Sbjct: 117 RNPVLTENLTGLARLVRAAVVPALENVALWHERDISHSSVERMIGPDATVTLDFALMRLKGLIDNLVVYPENMRANLDRLGGLIHSQRVLLALTQAGVSREDAYRLVQRNAMKVW------REQADFLTLLRADSEVSAALGAEELAELFDLGYHTKHVNTLFQRIFG 278
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A1G7AVJ8_9PROT (Adenylosuccinate lyase n=1 Tax=Rhodospira trueperi TaxID=69960 RepID=A0A1G7AVJ8_9PROT) HSP 1 Score: 248 bits (633), Expect = 4.280e-78 Identity = 127/169 (75.15%), Postives = 144/169 (85.21%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGSA 507
RNPILTENLTGLARVVRAAV PALENVALWHERDISHSSVERM GPDATVTLDFAL RLTGVV+K+++YPDAMTAN+ ++ GLV SQRVLLALTQAG+SRED+Y VQRNAM+VW E EG L+ L++D EVSA + AE LA FD+ +HT+HVDTIF RVFGSA
Sbjct: 274 RNPILTENLTGLARVVRAAVVPALENVALWHERDISHSSVERMIGPDATVTLDFALARLTGVVDKLVVYPDAMTANVARMSGLVFSQRVLLALTQAGVSREDAYRLVQRNAMRVW-----EGEGDLLTLLRADTEVSAALDAEALAGLFDLDHHTRHVDTIFKRVFGSA 437
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A843RMM6_9PROT (Adenylosuccinate lyase n=3 Tax=Alphaproteobacteria TaxID=28211 RepID=A0A843RMM6_9PROT) HSP 1 Score: 246 bits (629), Expect = 1.200e-77 Identity = 122/167 (73.05%), Postives = 140/167 (83.83%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFG 501
RNP+LTENLTGLAR+VRAAV PALENV LWHERDISHSSVERM GPD TVTLDFAL RL GVVEK+++YP+ M N+++LGGLVHSQRVLLALTQAG+SREDSY VQRNAMKVWG + FL L++D E++ K+S++ LAA FD YHTKHVDTIFARVFG
Sbjct: 269 RNPVLTENLTGLARLVRAAVVPALENVTLWHERDISHSSVERMIGPDTTVTLDFALSRLAGVVEKLLVYPETMQKNLDQLGGLVHSQRVLLALTQAGISREDSYRLVQRNAMKVWG-----GDADFLELLKADPEIAGKVSSQALAACFDAAYHTKHVDTIFARVFG 430
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A6N6VJG3_9HYPH (Adenylosuccinate lyase n=1 Tax=Parvibaculum sedimenti TaxID=2608632 RepID=A0A6N6VJG3_9HYPH) HSP 1 Score: 246 bits (629), Expect = 1.230e-77 Identity = 122/167 (73.05%), Postives = 142/167 (85.03%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFG 501
RNP+LTENLTGLAR+VR PA+ENVALWHERDISHSSVERM GPDATVTLDFALVRLTGV++K+++YP+ M N++KLGGLVHSQRVLLALTQ G+SREDSY VQRNAM VW EG FL L++D++VSAK+SA++L FD+GYHTKHVDTIFARVFG
Sbjct: 272 RNPVLTENLTGLARLVRGMAIPAMENVALWHERDISHSSVERMIGPDATVTLDFALVRLTGVIDKLLVYPENMQKNLDKLGGLVHSQRVLLALTQKGVSREDSYRLVQRNAMPVW-----RGEGNFLELLKADKDVSAKLSAKELEDLFDLGYHTKHVDTIFARVFG 433
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: UPI0019ADD390 (Adenylosuccinate lyase n=1 Tax=Novosphingobium sp. TaxID=1874826 RepID=UPI0019ADD390) HSP 1 Score: 238 bits (608), Expect = 1.850e-77 Identity = 124/170 (72.94%), Postives = 142/170 (83.53%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAF--LSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGS 504
RNPILTENLTGLAR+VR+AV PA+ENVALWHERDISHSSVER PDAT+TLDFAL RLTGV+EK++IYP M N++++GGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVW E +GA L L++D +VSAKIS DL ASF++ YH VDTIFARVFG+
Sbjct: 47 RNPILTENLTGLARMVRSAVVPAMENVALWHERDISHSSVERYIAPDATITLDFALGRLTGVIEKLLIYPVRMQKNLDRMGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVW-----ESDGALSLLELLKADAQVSAKISDADLEASFNLDYHLARVDTIFARVFGA 211
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Match: A0A0T0PUJ7_9SPHN (Adenylosuccinate lyase n=8 Tax=Sphingomonas TaxID=13687 RepID=A0A0T0PUJ7_9SPHN) HSP 1 Score: 245 bits (626), Expect = 3.780e-77 Identity = 121/168 (72.02%), Postives = 144/168 (85.71%), Query Frame = 1
Query: 1 RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVTLDFALVRLTGVVEKMMIYPDAMTANMEKLGGLVHSQRVLLALTQAGLSREDSYLAVQRNAMKVWGLPEAEREGAFLSFLQSDEEVSAKISAEDLAASFDMGYHTKHVDTIFARVFGS 504
RNP+LTENLTGLAR+VR VTPALENVALWHERDISHSSVER GPDA +TLDFAL RLTGVV+K+++YP+ M N++++GGLVHSQRVLLALTQAG+SREDSY VQRNAMKVW E++ E + L L++D EV+A +S E++AA FD+GYH KHVDTIFARVFGS
Sbjct: 273 RNPVLTENLTGLARMVRGYVTPALENVALWHERDISHSSVERYIGPDACITLDFALARLTGVVDKLLVYPERMQKNLDRMGGLVHSQRVLLALTQAGVSREDSYRLVQRNAMKVW---ESDGELSLLELLKADPEVAAALSPEEIAAKFDLGYHFKHVDTIFARVFGS 437 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100992.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100992.1.1 >prot_L-digitata_M_contig100992.1.1 ID=prot_L-digitata_M_contig100992.1.1|Name=mRNA_L-digitata_M_contig100992.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=170bp RNPILTENLTGLARVVRAAVTPALENVALWHERDISHSSVERMFGPDATVback to top mRNA from alignment at L-digitata_M_contig100992:1..510+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100992.1.1 ID=mRNA_L-digitata_M_contig100992.1.1|Name=mRNA_L-digitata_M_contig100992.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=510bp|location=Sequence derived from alignment at L-digitata_M_contig100992:1..510+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100992:1..510+ >mRNA_L-digitata_M_contig100992.1.1 ID=mRNA_L-digitata_M_contig100992.1.1|Name=mRNA_L-digitata_M_contig100992.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=510bp|location=Sequence derived from alignment at L-digitata_M_contig100992:1..510+ (Laminaria digitata LdigPH10_18mv male)back to top |