mRNA_L-digitata_M_contig1009.7.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: D8LQ67_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ67_ECTSI) HSP 1 Score: 645 bits (1664), Expect = 4.240e-207 Identity = 498/1082 (46.03%), Postives = 611/1082 (56.47%), Query Frame = 1
Query: 946 DDTCL--DFILDAIDNEVDL----------------GCVSSSDGLTDGGSDASPDPGASEGQRERNARLAELVRM----LAHGPTDERLGWLGGSNSTGAVVANGSGGLWSPALLNRVRDVLFRVMGRPRGTSDASPSSVTELPGLLAARLVIGFAAPSPRVARSGVETRPRSGRPRDGAKEGSGHLAKACRHLFEVSKKAGADRAFFSSGTVTCLLEFIELVASEMNALSSTTXXXXXXXVRQHADGDGRG--LRGELDGGGFGFDDSEGNXXXXXXXXXXXXXXXXRSRRSTIRKCSAETANLYVERICDALTFAVGCLKNVSASGSLQHRLVQAGAAHVFCSFVRSIRDLCHRCDESQRQTPRPLSTNDAAELANLSPGST-GKIDREFDGKTGGE---IGENSKXXXXXXXXXXXXXQTDGGRGGQRRENLTNSLRKRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGG------DSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLEEMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQ--SEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYG-SWANDRPPVHARRDSSFVEPFNSSCCFGN--RRSTGLASTDS----RPVFRNTLFGLASKARRSSADEEATLEAGKGDDGLLASGTGGGSSSSGIGGGPSLAPSHG---PANGRGTI--------RREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIEPVPAGGAREILGGIETYKKLWWTLRELVEACSSEGGRGVQ 4029
D CL +FILDAIDNEVDL G + D SD PDPGA EGQRER+ARL L++M L H +ER+ G ++ GA N G A R VL RVM RP +DASP++VTELP LLAARLV+ P A + G DG L KACRH+FEVSKK AD AFFSSG VT +L F+EL AS ++++S + R++ + + R + E G + + S S + C +Y D+LTF+VGCLKN+SA L+ RLVQAG+ C VRS RDLC RC+ SQ+Q L T+ + T ++ +GGE IGE + + + LR+RVS LA IGL+RDL + ND +RAAG VS LCS+LRPFR+ DVVLNT+RALA+LSL + TR +AS+ HVRDLLAAL+EQ R ++ F DSSR ++ + A V E R++WE + KRVA C+RIAF LGNLTS ++ R+LIGLRLGG ESLP L + +R + AWECLC S+ T T S + G E W+R++LRRAC GLEEMLVK VRLLANISI+R+VGQRVC HPGLVA+EPLLGKCLE++ L EDG + + GL +G + S+GG W SG G IPGEELLLN V L+ NLS+YG + AN P RR + + RS G+ + S RP N LF LA KARR +E+ T+ + G A G + G P+LA + PA G G R EVL GHLVKVLLHPNAEAVAEAARAFGNFSRDPSCR A++RRRADEVLVA XXXXXXXXXXXXXXXXXXXXXXXXXXX E V AGE LARLVRRAGL+DP MAE+ACQALHNL+IEP G +LG ET+KKLWWTL+EL+EACS E +GV+
Sbjct: 52 DAQCLGQEFILDAIDNEVDLSRRDFGFDDDDEEDVAGQRQTQSIPDDDRSDGPPDPGALEGQRERSARLTGLLQMFSRHLDHANEEERVR---GRHTDGAKREN-QGPTDVEAPTARALVVLSRVMDRPLRAADASPTTVTELPALLAARLVVDLVLRLPLPAPLSSKPTEEDGTGGDGWSARQQLLVKACRHMFEVSKKPDADEAFFSSGAVTGVLGFVELSASHLDSISGAS-------FRKNPEREERPELVSVEYSSACIGDAGAHNSSNRTRCSSSSIADDSNASGDSDLGGCVRHVGGIY-----DSLTFSVGCLKNISADQGLRDRLVQAGSIRALCRLVRSTRDLCGRCERSQKQQEETLQTSIRRVPTTENEEQTKAAVNVRASADSGGEEVGIGEQDEKGL----------------------DCVDLLRRRVSPLLAQAIGLVRDLVVDE-TNDRVRAAGVVSTLCSILRPFRNHQDVVLNTSRALARLSLHQPTRELIASEPGHVRDLLAALLEQSRDIDPGFKSIEEGYRDSSR-------ATSTTAAVAPVEHRQHWENQGKRVATCVRIAFALGNLTSASDENRRLIGLRLGGAESLPAFLHSFSRDYFMAWECLC-----SVETHHAASVDGITETGRSSAWGARGAPAVVLGECWARRTLRRACYGLEEMLVKAVRLLANISIHRDVGQRVCRHPGLVALEPLLGKCLELYVLSEDGALP-----QAGLCDQRGKRCWSQGGDW--GSGAGPTEAATIPGEELLLNAVCLITNLSYYGPAAANCTPSSPVRRALPSISSTRTPAGVSRVVDRSDGVEPSVSAALGRPPQGNILFALAGKARRDVDEEQETIASTGGSVEKSARPRPDGCFREEVVGAPALAVTSQRCRPATGSGEYGGGTGGRTREEVLCGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCRRALTRRRADEVLVALIXXXXXXXXXXXXXXXXXXXXXXXXXXXLCRESVGAGERLARLVRRAGLADPGMAELACQALHNLLIEP--GLGVDAVLGSPETFKKLWWTLKELMEACSCEA-QGVE 1072
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A6H5L021_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L021_9PHAE) HSP 1 Score: 641 bits (1653), Expect = 7.540e-206 Identity = 510/1103 (46.24%), Postives = 633/1103 (57.39%), Query Frame = 1
Query: 946 DDTCL--DFILDAIDNEVDL-----------------GCVSSSDGLTDGGSDASPDPGASEGQRERNARLAELVRM----LAHGPTDERLGWLGGSNSTGAVVAN-GSGGLWSPALLNRVRDVLFRVMGRPRGTSDASPSSVTELPGLLAARLVIG----FAAPSPRVARSGVETRPRSGRPRDGAKEGSGHLAKACRHLFEVSKKAGADRAFFSSGTVTCLLEFIELVASEMNALSSTTXXXXXXXVRQHADGDGRGLRGELDGGGFGFDDSEGNXXXXXXXXXXXXXXXXRSRRSTIRKCSAETANLYVER-----------ICDALTFAVGCLKNVSASGSLQHRLVQAGAAHVFCSFVRSIRDLCHRCDESQRQTPRPLSTNDAAELANLSPGSTGKIDREFDGKTGGEIGENSKXXXXXXXXXXXXXQTDGGRGGQRRENL--TNSLRKRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAG---FEESWSRKSLRRACDGLEEMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQ--SEGGCWRVDSGTG-GPVEEL-IPGEELLLNVVSLVANLSFYGSWAND--------RPPVHARRDSSFVEPFNSSCCFGNRRSTGLASTDS----RPVFRNTLFGLASKARRSSADEEATLEAGKGD----------DGLLASGTGGGSSSSGIGGGPSLA---PSHGPANGRGTI--------RREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIEPVPAGGAREILGGIETYKKLWWTLRELVEACSSE 4011
D CL +FILDAIDNEVDL G + D SD PDPGA EGQRER+ARL L++M L H +ER+ ++ GA N GS + +P R +L RVM RP +DASP++VTELP LLAARLV+G F PS R ++ T G D L KACRH+FEVSKK AD AFFSSG VT +LEF+EL AS ++++S + R++ + +G + EL + +R S A+ +N +R I D+LTF+VGCLKN+SA L+ RLVQAG+ C VRS RDLC RC+ SQ+Q + T+ L + P + E K ++ E++ G GGQ + L + LR+RVS LA IGL+RDLA + ND +RAAG VS LCS+ RPFR+ DVVLN ARALA+LSL + TRG + S+ HVRDLLAAL+EQG +++ F E+ +S + A V E R++W+ + KRVA C+RIAF LGNLTS ++ R+LIG R GG ESLP L T +RA+L AWECLC S+ T A + + + I + G G E W+R++LRRAC GLEEMLVK VRLLANISI+R+VGQ+VC HPGLVA+EPLLGKCLE++ L++DG + + GL QG + S+GG W G+G GPVE IPGEELLLN V L+ NLS+YG A + R P SS P S G RS G+ + S RP N LF LA KARR +E+ T+ A GD DG L + G P+LA S+ PA G G R EVL GHLVKVLLHPNAEAVAEAARAFGNFSRDPSCR A++RRRADEVLVA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXE V AGE L RLVRRAGL+DP MA++ACQALHNL+IEP G +LG +T+KKLW TL+EL+EACS E
Sbjct: 19 DGHCLGQEFILDAIDNEVDLSRRDFGFDDDDEEEDVAGQWHTQSIPDDDRSDGPPDPGALEGQRERSARLTGLLQMFSRHLDHASEEERVR---DRHTNGAKRKNQGSTDVETPTA--RALVILSRVMDRPLRAADASPTTVTELPTLLAARLVVGLVLRFPLPSLRPSKP---TEEEDGTGGDVWSARQQLLVKACRHMFEVSKKPDADEAFFSSGAVTGVLEFVELSASRLDSISGAS-------FRKNPEREGE--KPELV-----------SVEYSNACIGDAGAHNSSNRTSCSSSSIADDSNASGDRDLGGCVWHVGGIYDSLTFSVGCLKNISADQGLRDRLVQAGSIRALCKLVRSTRDLCGRCERSQKQQEEAIQTS----LRRVPP-----TENEEQTKAADDVRESADPGGGEV-----------GIGGQDEKGLDCVDLLRRRVSPLLAQAIGLVRDLALDE-TNDSVRAAGFVSTLCSIFRPFRNHQDVVLNAARALARLSLHQPTRGLITSEPGHVRDLLAALLEQGGKIDAGFESIEEGYEDPSRATS-TTAAVAPVEHRQHWDNQGKRVATCVRIAFTLGNLTSASDENRRLIGFRFGGAESLPSFLHTFSRAYLMAWECLC-----SVKT---HHAASVDGITETGSITAWGARGTPTVVLGECWARRTLRRACYGLEEMLVKAVRLLANISIHRDVGQQVCRHPGLVALEPLLGKCLELYVLYQDGALP-----QAGLRDQQGKRCWSQGGDW----GSGAGPVEAATIPGEELLLNAVCLITNLSYYGPTAANCTAASPGGRTPPSI---SSTGTPAGVSRVVG--RSDGVEPSVSAALGRPPHGNILFALAGKARRDVDEEQETI-ASTGDSVEKSARARPDGCLRQE---------VVGAPALAVTSQSYRPATGSGEYGGGTGGRTREEVLCGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCRRALTRRRADEVLVALIXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXERVGAGERLVRLVRRAGLADPGMADLACQALHNLLIEP--GLGVDAVLGSPKTFKKLWRTLKELMEACSCE 1037
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A7S2HFV9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFV9_9STRA) HSP 1 Score: 134 bits (337), Expect = 2.210e-28 Identity = 154/580 (26.55%), Postives = 225/580 (38.79%), Query Frame = 1
Query: 2167 TNSLRKRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLEEMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGSWANDRPPVHARRDSSFVEPFNSSCCFGNRRSTGLASTDSRPVFRNTLFGLASKARRSSADEEATLEAGKGDDGLLASGTGGGSSSSGIGGGPSLAPSHGPANGRGTIRREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMI 3906
++S K ++ L T G+LR+L+ K L A G S LC++++PF +++LN ARALAKLSL E R +M S+ H+ DLL + GD G S + + P++ V +E ++ + +R+AF LGNLTS E R IG+ G +SL +E + H + A R+ + + +S+ +G G S LEE+L+K +RL+AN+SI+ +G+ + PG+ + PLL ++ G + EELLLNVVS + NLS+YG+ + V A EP G R G T+ VF T RE+ L+ VL++ N EAVAEAARAFGN SR P R MS ADE LV E ++ L L+R AGL DP +A + C+AL+NL++
Sbjct: 193 SSSHEKLMAQLLVQTTGILRNLSLSKNHFRQLAACGVPSGLCAIVKPFLRHKELMLNVARALAKLSLYEPLRCDMNSNVKHMEDLLRLM----ELTAGDLSGSLSVHHKPER----QPSVSVESENTAL----QQPIQLLVRVAFTLGNLTSGNERNRLAIGVASNGGKSL---MEVLSLFH-------------GYYSLAERD----HDIDTFRSSISMN-DGGGHVGLLS---------DLEEILIKLIRLIANVSISYPIGRAMVIEPGVSDLVPLLQS------------------------AIYGAR----------------------EELLLNVVSAITNLSYYGN--QGQAYVSATTQEGSQEP-------GEDRRDG--HTEDSRVF--------------------------------------------------------------TAYREICA-ELLAVLVNDNYEAVAEAARAFGNLSRVPKVRRFMSESSADEALVMLLDHPSRDVIAAAAGTLVNIAADPACKDLLLNEELEGYSRLVCLLRSAGLRDPPLASVVCKALYNLLV 610
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A7R9UEL9_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UEL9_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 7.310e-14 Identity = 149/642 (23.21%), Postives = 231/642 (35.98%), Query Frame = 1
Query: 2221 LRDLAAGKGKNDDLRAAGAVSVLCSVLRPF---RDQLDVVLNTARALAKLSLQERTRGEM------ASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACI-----RIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLS------AWECLCIPAGGSIVTPAGREAGMAENTSF----SKKIVSLGMEGAGFEESWSRKSLRRACDGLE--------------EMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGSWANDRPPVHARRDSSFVEPFNSSCCFGNRRSTGLASTDSRPVFRNTLFGLASKARRSSADEEATLEAGKGDDGLLASGTGGGSSSSGIGGGPSLAPSHGPANGRGTIRREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEG-VDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIEPVPAGGAREILGGIETYKKLWWTLRELVEACSSEGGRGVQ 4029
+R+L + + + + GA C + F R+ +++L+ AR L KLS E R ++ +S S LL L + R L K+ + +V + + Y + E K + + I RI++ LGNLTS E+ R +G R GV + L+ T R +L+ A + P GG + ++ + ++ S S +S E SR + ++ D + + LVKT RLLAN++I+RE+G L + P G +G I + R VD+ G EEL+LN VS + NLSFY +P R+ G R +F R +T L+++LL N EAVAEAARAFGNFSR R+AM RADE LV + A L ++R+AGL DP ++ + C+ L+NL+++ V AG ++G T++ + L EL E R ++
Sbjct: 558 MRNLCSARKICERIAELGAAKEFCGLFATFGGERNTTELLLHAARCLGKLSCCEAARADINSTLANSSPSGGAAALLKVLDIRERPH-------GLGLITKESIGEECSTLVPPS--KAYAKAERKNLESSILSLVVRISYTLGNLTSSNEENRVALGERFNGVTIVSSLINTLGRCYLASSGARGAKDASASPRGGQGRSFKSGKSDVTDSDSXXXEDSLPKISAKAEAPRLSRPSSRSAKSKSADAAQYTVSIQNPPDNLLIDALVKTTRLLANMAIHREIGA------SLAVLSPGEG----------EGNIGDTLVRV-----------------VDAAREGK------SEELMLNAVSAITNLSFY-------------------DP---------RQGRG------RWIFEE--------------------------------------------------------------RELTITSVLLEILLCLNVEAVAEAARAFGNFSRHEGFRKAMRESRADEALVLLLQHPDRDVVCNSCGALINIAADKDHRRLFSCNHQLQAPTKLLDILRKAGLRDPSLSSLVCKTLYNLLMD-VEAGRIGAVVGS-RTFEAMVRALEELCETAEDTALRKLE 1053
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A7S2SVZ7_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SVZ7_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 3.760e-13 Identity = 127/490 (25.92%), Postives = 168/490 (34.29%), Query Frame = 1
Query: 2575 VAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARA-HLSAWECLCIPAGGSIVTPAGR--EAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLEEMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGSWANDRPPVHARRDSSFVEPFNSSCCFGNRRSTGLASTDSRPVFRNTLFGLASKARRSSADEEATLEAGKGDDGLLASGTGGGSSSSGIGGGPSLAPSHGPANGRGTIRREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIE---PVPAGGARE---------ILGGIETYKKLWWTLRELVEA 3999
VA IR+AF LGNLT+ E R I L GG + L GLL + + HL + AG EAG ++ GAG +ES EE+LVK +RL+AN+SI+ VG + PG+ + LL HSL+ + EELLLN VS + NLSFYG D + +RN +F R + L G LV VLLH N EAVAEAARAFGNFSR R+ M++ RADE LV + L ++R AGL D +A +A +AL N + + AG A +LGG + ++L +L EL+EA
Sbjct: 34 VALLIRMAFSLGNLTASNEGNRCHI-LEHGGAQILVGLLHRATQHYHLE------------VEAEAGNVPEAGQRRDS----------QPGAGSDES-------------EELLVKLIRLIANMSISPVVGPALAGSPGVEELADLL------------------------RHSLRRQR----------------------EELLLNAVSAITNLSFYGP------------DPXXXXXXXXXXXXXXXXXXXXXXXXXKGTWRNLVFR----------------------------------------------------------RYKTLCGDLVGVLLHENEEAVAEAARAFGNFSRAAVARKFMTQSRADEALVILLDHSSREVVFAAAGALVNLGADPEAKEVLWLGELGGCTKLVEVLRCAGLKDLPLAAVAAKALFNALFDFTSDADAGKASAEQSLEDLDMVLGGGGSTERLRRSLEELLEA 371
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A8J2SRY3_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SRY3_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 1.130e-9 Identity = 55/147 (37.41%), Postives = 70/147 (47.62%), Query Frame = 1
Query: 3571 LVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADEVLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIEPVPAGGAREILGGIETYKKLWWTLRELVEACSSE 4011
L+ V +H N EAV+EAARAFGNFSRD R AM R E LV A E L +VRRAG+ D +A +AC+ALHNL+++ G A E+LG T+ +L TL ELV +
Sbjct: 341 LLAVTVHENHEAVSEAARAFGNFSRDEDARRAMRRLGVVEALVLLLGHPARDVVFAATGALVNAAVDGRDVLWEHK----AHEELVAVVRRAGVQDLDLAAVACKALHNLLLDAA-TGTAAELLGAA-THGRLLDTLGELVAVADDD 481
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A6A3XUT8_9STRA (Uncharacterized protein n=4 Tax=Phytophthora TaxID=4783 RepID=A0A6A3XUT8_9STRA) HSP 1 Score: 71.6 bits (174), Expect = 9.730e-9 Identity = 84/370 (22.70%), Postives = 150/370 (40.54%), Query Frame = 1
Query: 2182 KRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLE--EMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGSWANDRPPVHARR--DSSFVE 3279
K ++ L T G+LR+L+ K + A LC ++ F ++++N +R L+KL+L E R ++ S +++L+A + + + + + +QR ++ IR+ F+LGNL + + R+LI G+E L +L+ A + S + ++ M +N +++ RRA +G + E+L+K VR++AN++I+ EVG ++ + GL PLLG V V +R G EEL+LN VS + N+S+Y + PP + + SSF+E
Sbjct: 384 KEIAQFLIQTTGILRNLSVSKSNHKQFLEARIPLRLCCMIPAFIAHQELMVNISRILSKLTLHELPRAQLNQSSTSLQNLVALIDHR-----------------------QNSWLSLEDQQRSDMRFQD---LLFIRVLFVLGNLCAGNDQNRRLIATNFSGIEILVEVLQFYAARYSSVRD----------------DSEMNDNDEKAER--------------------RRASEGEQSMEVLIKLVRVVANLAISAEVGAQLNGNEGLA---PLLG--------------VLQVAQRAG-----------------------------DEELMLNAVSCITNVSYYST-----PPTSSSKYGASSFIE 640
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A662XPN7_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPN7_9STRA) HSP 1 Score: 69.3 bits (168), Expect = 4.840e-8 Identity = 84/350 (24.00%), Postives = 138/350 (39.43%), Query Frame = 1
Query: 2182 KRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLE--EMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGS 3225
K V+ L T G+LR+L+ K + A + LCS++ F + ++++N +R L+KL+L E R ++ SA+V++L+A +V+ R +S + + R+ + IR+ F+LGNL + + R LI L G+ L +L A + C S A E+ + R A G + E+L+K VR+LAN+SIN +VG ++ G + PLL E+ E V + + EEL+LN VS + N+S+Y S
Sbjct: 320 KEVAQFLVQTTGILRNLSISKSYHKQFVEAQVPARLCSMIPAFLEHQELMVNVSRILSKLTLHELPRAQINQQSANVQNLVA-IVDHRR-------------------NSWLSLVDQQHSEMRFQD------LLFIRMFFVLGNLCAGNDHNRSLIALDFSGISLLLEVLRFYAARY-------CDERSNS----------------------------ANHEQERQEEEDRGATTGEQAMEVLIKLVRVLANLSINADVGAQL---NGREELAPLL----EILE---------------------------------------VAQRVGDEELMLNAVSCITNVSYYSS 562
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A7S1TTF5_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TTF5_9STRA) HSP 1 Score: 67.0 bits (162), Expect = 2.430e-7 Identity = 54/174 (31.03%), Postives = 79/174 (45.40%), Query Frame = 1
Query: 3511 PSHGPANGRGTIRREVLTGHLVKVLLHPNAEAVAEAARAFGNFSRDPSCREAMSRRRADE-VLVAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEGVDAGEVLARLVRRAGLSDPRMAEIACQALHNLMIEPVPAGGAREILGGIETYKKLWWTLRELVEACSSEGGRGVQ 4029
P GP R E +T L+++LL N EAVAEAARAFGNFSR + R ++ RADE +L+ + A L ++RRAGL D ++ + C+ L+NL+++ P G ILG + + + TL EL E R ++
Sbjct: 504 PRQGPETWIFADREEAITRALLEILLCTNVEAVAEAARAFGNFSRYRAFRRSLRACRADEALLLLLQHPDRDVVCNSCGALINIAADEAHRRLFSYTHQLQAPTKLLNILRRAGLRDSPLSSLVCKTLYNLLMDVEP-GRIGAILGP-KVFDSMLNTLEELCETAEDTALRKLE 675
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Match: A0A662WTQ9_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WTQ9_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 5.610e-7 Identity = 79/348 (22.70%), Postives = 136/348 (39.08%), Query Frame = 1
Query: 2182 KRVSTPLALTIGLLRDLAAGKGKNDDLRAAGAVSVLCSVLRPFRDQLDVVLNTARALAKLSLQERTRGEMASDSAHVRDLLAALVEQGRQVNGDFGGDSSRLEEKDGGSSDSPAIVVSAEQRRYWEKEEKRVAACIRIAFILGNLTSLGEDTRKLIGLRLGGVESLPGLLETSARAHLSAWECLCIPAGGSIVTPAGREAGMAENTSFSKKIVSLGMEGAGFEESWSRKSLRRACDGLEEMLVKTVRLLANISINREVGQRVCCHPGLVAVEPLLGKCLEVFELFEDGIIVPHVPRRQGLHSLQGLQSEGGCWRVDSGTGGPVEELIPGEELLLNVVSLVANLSFYGS 3225
K ++ L T G+LR+L+ K + A + LC+V+ F + ++++N +R L+KL+L E R ++ SA+V++L+ LV+ RQ + + + +QR ++ IR+ F+LGNL + + R LI L G+ L +L+ A + ++ S E G + + E+LVK VR+ AN++IN +VG ++ GL PLL E+ E V + + EEL+LN VS + N+S+Y +
Sbjct: 318 KEIAQFLIQTTGILRNLSVAKSYHKQFIEAQVPARLCNVIPAFLEHQELMVNVSRILSKLTLHELPRAQINQQSANVQNLVT-LVDH-RQ---------------------NSWLSLVDQQRSEMRFQD---LLFIRMFFVLGNLCAGNDHNRSLIALDFSGIRLLLEVLQFYAARYCD------------------------------ERSNSASHEQEGXXXXXXKDCGATTGEQAMEVLVKLVRVFANLAINADVGAQLNGRDGLA---PLL----EILE---------------------------------------VAQRVGDEELMLNAVSCITNVSYYST 563 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1009.7.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 15
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig1009.7.1 >prot_L-digitata_M_contig1009.7.1 ID=prot_L-digitata_M_contig1009.7.1|Name=mRNA_L-digitata_M_contig1009.7.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=1377bp MGRFQVQEEDVPQDFPASGNIAQVLRQARASLKDPSRPFTPTERRLRSTKback to top mRNA from alignment at L-digitata_M_contig1009:10814..16836+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig1009.7.1 ID=mRNA_L-digitata_M_contig1009.7.1|Name=mRNA_L-digitata_M_contig1009.7.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=6023bp|location=Sequence derived from alignment at L-digitata_M_contig1009:10814..16836+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig1009:10814..16836+ >mRNA_L-digitata_M_contig1009.7.1 ID=mRNA_L-digitata_M_contig1009.7.1|Name=mRNA_L-digitata_M_contig1009.7.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=4131bp|location=Sequence derived from alignment at L-digitata_M_contig1009:10814..16836+ (Laminaria digitata LdigPH10_18mv male)back to top |