mRNA_L-digitata_M_contig100888.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: D7FTH5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FTH5_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 1.060e-14 Identity = 34/35 (97.14%), Postives = 34/35 (97.14%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNLKSLAGAPCVR 105
ISEAYPEVPWVFVFRDPVEVMVSNLKS AGAPCVR
Sbjct: 282 ISEAYPEVPWVFVFRDPVEVMVSNLKSYAGAPCVR 316
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: B9XBL0_PEDPL (Aspartyl/asparaginyl beta-hydroxylase n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XBL0_PEDPL) HSP 1 Score: 53.1 bits (126), Expect = 4.150e-7 Identity = 21/30 (70.00%), Postives = 28/30 (93.33%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNLKSLAG 90
I +A+P+VPW+FV+R+PVEV+VSNLK LAG
Sbjct: 164 IHKAFPDVPWIFVYREPVEVIVSNLKQLAG 193
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A4D9CT70_9STRA (JmjC domain-containing protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CT70_9STRA) HSP 1 Score: 51.6 bits (122), Expect = 1.470e-6 Identity = 18/35 (51.43%), Postives = 27/35 (77.14%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNLKSLAGAPCVR 105
I +A+PE PW +++RDPVE++VSN + G PC+R
Sbjct: 299 ILKAFPETPWAYIYRDPVEIIVSNFQRGRGGPCIR 333
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: D7G7C8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7C8_ECTSI) HSP 1 Score: 51.6 bits (122), Expect = 1.480e-6 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNLKSLAGAP 96
+ +AYPEV WV++FRDPVEVMVSNLK A P
Sbjct: 193 MMKAYPEVGWVYLFRDPVEVMVSNLKCFANRP 224
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A835ZD42_9STRA (N-acetyltransferase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD42_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 2.000e-6 Identity = 21/36 (58.33%), Postives = 29/36 (80.56%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNL-KSLAGAPCVR 105
++ +P+VPWV++FRDPVEVMVSN+ + APCVR
Sbjct: 825 VTSMFPDVPWVYLFRDPVEVMVSNIGRGELAAPCVR 860
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: F2UI36_SALR5 (JmjC domain-containing protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2UI36_SALR5) HSP 1 Score: 50.1 bits (118), Expect = 5.140e-6 Identity = 24/38 (63.16%), Postives = 30/38 (78.95%), Query Frame = 1
Query: 4 SEAYPEVPWVFVFRDPVEVMVSNLKSL--AGA--PCVR 105
+EA+PEVPW+FV+RDPVEVM S+ K AGA PC+R
Sbjct: 219 TEAFPEVPWMFVYRDPVEVMASHFKQKVPAGAKVPCLR 256
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A6H5K3E4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3E4_9PHAE) HSP 1 Score: 49.3 bits (116), Expect = 9.700e-6 Identity = 21/30 (70.00%), Postives = 25/30 (83.33%), Query Frame = 1
Query: 1 ISEAYPEVPWVFVFRDPVEVMVSNLKSLAG 90
+ +AYPEV WV++FRDPVEVMVSNLK G
Sbjct: 317 MMKAYPEVGWVYLFRDPVEVMVSNLKGAYG 346
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A7S4T9D0_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T9D0_9STRA) HSP 1 Score: 48.9 bits (115), Expect = 1.330e-5 Identity = 20/36 (55.56%), Postives = 28/36 (77.78%), Query Frame = 1
Query: 4 SEAYPEVPWVFVFRDPVEVMVSNLKSLAG--APCVR 105
EAYP+ PW+FVFR+PV++M+S+LK G A C+R
Sbjct: 211 KEAYPDTPWIFVFREPVQIMMSHLKDNVGDRAVCLR 246
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A7S2H7V9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2H7V9_9STRA) HSP 1 Score: 48.5 bits (114), Expect = 1.810e-5 Identity = 22/35 (62.86%), Postives = 29/35 (82.86%), Query Frame = 1
Query: 10 AYPEVPWVFVFRDPVEVMVSNLK---SLAGAPCVR 105
A+P+VPW FVFR+PV+VM+S+LK S AGA C+R
Sbjct: 240 AFPDVPWTFVFREPVQVMMSHLKGSGSHAGAVCMR 274
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Match: A0A7S2SP01_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP01_9STRA) HSP 1 Score: 48.1 bits (113), Expect = 2.480e-5 Identity = 20/35 (57.14%), Postives = 28/35 (80.00%), Query Frame = 1
Query: 4 SEAYPEVPWVFVFRDPVEVMVSNLKS-LAGAPCVR 105
+A+PEVPW FVFR+PV+VM+S+ K +GA C+R
Sbjct: 269 QQAFPEVPWAFVFREPVQVMMSHFKGGTSGAVCLR 303 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100888.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 13
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100888.1.1 >prot_L-digitata_M_contig100888.1.1 ID=prot_L-digitata_M_contig100888.1.1|Name=mRNA_L-digitata_M_contig100888.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=35bp ISEAYPEVPWVFVFRDPVEVMVSNLKSLAGAPCVRback to top mRNA from alignment at L-digitata_M_contig100888:686..790- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100888.1.1 ID=mRNA_L-digitata_M_contig100888.1.1|Name=mRNA_L-digitata_M_contig100888.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=105bp|location=Sequence derived from alignment at L-digitata_M_contig100888:686..790- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100888:686..790- >mRNA_L-digitata_M_contig100888.1.1 ID=mRNA_L-digitata_M_contig100888.1.1|Name=mRNA_L-digitata_M_contig100888.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=105bp|location=Sequence derived from alignment at L-digitata_M_contig100888:686..790- (Laminaria digitata LdigPH10_18mv male)back to top |