mRNA_L-digitata_M_contig100819.3.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A7H0VIY3_9FLAO (EamA family transporter n=1 Tax=Croceimicrobium hydrocarbonivorans TaxID=2761580 RepID=A0A7H0VIY3_9FLAO) HSP 1 Score: 57.4 bits (137), Expect = 1.210e-8 Identity = 26/35 (74.29%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 1 MNKSTKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
M KIKAHLAL+GVALIYGLNYS+AKDVMP ++
Sbjct: 1 MRDLDKIKAHLALLGVALIYGLNYSIAKDVMPEYL 35
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A2N2ZT76_9BACT (EamA/RhaT family transporter (Fragment) n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-12 TaxID=2013680 RepID=A0A2N2ZT76_9BACT) HSP 1 Score: 51.6 bits (122), Expect = 5.730e-8 Identity = 23/32 (71.88%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
S +K HLAL G LIYG NYS+AKDVMPNFV
Sbjct: 2 SNNLKPHLALFGANLIYGANYSIAKDVMPNFV 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A5C6RQD5_9FLAO (DMT family transporter n=1 Tax=Vicingus serpentipes TaxID=1926625 RepID=A0A5C6RQD5_9FLAO) HSP 1 Score: 52.0 bits (123), Expect = 1.030e-6 Identity = 21/32 (65.62%), Postives = 28/32 (87.50%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
ST +KAHLA++G LIYG+NYS+AKDVMP ++
Sbjct: 2 STNLKAHLAILGANLIYGINYSIAKDVMPAYI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: G8R443_OWEHD (Putative permease, DMT superfamily n=1 Tax=Owenweeksia hongkongensis (strain DSM 17368 / CIP 108786 / JCM 12287 / NRRL B-23963 / UST20020801) TaxID=926562 RepID=G8R443_OWEHD) HSP 1 Score: 50.8 bits (120), Expect = 2.670e-6 Identity = 23/32 (71.88%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
S K+ AH AL VALIYGLNYS+AKDVMP F+
Sbjct: 2 SPKLLAHFALFAVALIYGLNYSIAKDVMPAFI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A6N6M720_9FLAO (DMT family transporter n=1 Tax=Salibacter halophilus TaxID=1803916 RepID=A0A6N6M720_9FLAO) HSP 1 Score: 50.8 bits (120), Expect = 2.690e-6 Identity = 24/35 (68.57%), Postives = 26/35 (74.29%), Query Frame = 1
Query: 1 MNKSTKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
M+ I AHLAL G LIYGLNY +AKDVMPNFV
Sbjct: 1 MSDKNVIPAHLALFGANLIYGLNYILAKDVMPNFV 35
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A2A5H9Y0_9FLAO (EamA family transporter n=2 Tax=unclassified Flavobacteriales TaxID=403978 RepID=A0A2A5H9Y0_9FLAO) HSP 1 Score: 50.1 bits (118), Expect = 5.040e-6 Identity = 21/32 (65.62%), Postives = 25/32 (78.12%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
S +K HLAL G LIYG NYS+AKD+MPNF+
Sbjct: 2 SNNLKPHLALFGANLIYGANYSIAKDLMPNFI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A7K3WRT3_9FLAO (DMT family transporter n=1 Tax=Cryomorpha ignava TaxID=101383 RepID=A0A7K3WRT3_9FLAO) HSP 1 Score: 48.9 bits (115), Expect = 1.310e-5 Identity = 21/32 (65.62%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
+ + KAHLAL+ VALIYGLNY VAK+VMP ++
Sbjct: 2 TARTKAHLALLAVALIYGLNYIVAKEVMPKYI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A2N2YUS1_9BACT (EamA/RhaT family transporter n=1 Tax=Bacteroidetes bacterium HGW-Bacteroidetes-17 TaxID=2013685 RepID=A0A2N2YUS1_9BACT) HSP 1 Score: 48.5 bits (114), Expect = 1.780e-5 Identity = 20/32 (62.50%), Postives = 27/32 (84.38%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
+ K+KAHLAL+G LIYGLNY VAK +MP+++
Sbjct: 2 NNKVKAHLALIGGNLIYGLNYVVAKGIMPDYI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A2D8WG05_9FLAO (EamA family transporter (Fragment) n=1 Tax=Flavobacteriales bacterium TaxID=2021391 RepID=A0A2D8WG05_9FLAO) HSP 1 Score: 48.1 bits (113), Expect = 2.290e-5 Identity = 20/32 (62.50%), Postives = 26/32 (81.25%), Query Frame = 1
Query: 10 STKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
S KI AH+A+ LIYG+NY+VAKDVMPN++
Sbjct: 2 SKKILAHIAIFSANLIYGINYTVAKDVMPNYI 33
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Match: A0A7V9MPB0_9BACT (DMT family transporter n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A7V9MPB0_9BACT) HSP 1 Score: 48.1 bits (113), Expect = 2.450e-5 Identity = 22/35 (62.86%), Postives = 30/35 (85.71%), Query Frame = 1
Query: 1 MNKSTKIKAHLALVGVALIYGLNYSVAKDVMPNFV 105
M+KS IKAHL+L+ +IYG+NYSVAKDVMP+++
Sbjct: 1 MDKSY-IKAHLSLLAANIIYGINYSVAKDVMPSYI 34 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100819.3.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100819.3.1 >prot_L-digitata_M_contig100819.3.1 ID=prot_L-digitata_M_contig100819.3.1|Name=mRNA_L-digitata_M_contig100819.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=35bp MNKSTKIKAHLALVGVALIYGLNYSVAKDVMPNFVback to top mRNA from alignment at L-digitata_M_contig100819:831..935+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100819.3.1 ID=mRNA_L-digitata_M_contig100819.3.1|Name=mRNA_L-digitata_M_contig100819.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=105bp|location=Sequence derived from alignment at L-digitata_M_contig100819:831..935+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100819:831..935+ >mRNA_L-digitata_M_contig100819.3.1 ID=mRNA_L-digitata_M_contig100819.3.1|Name=mRNA_L-digitata_M_contig100819.3.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=105bp|location=Sequence derived from alignment at L-digitata_M_contig100819:831..935+ (Laminaria digitata LdigPH10_18mv male)back to top |