mRNA_L-digitata_M_contig1008.5.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig1008.5.1
Unique NamemRNA_L-digitata_M_contig1008.5.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: D7G902_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G902_ECTSI)

HSP 1 Score: 531 bits (1369), Expect = 2.340e-187
Identity = 287/317 (90.54%), Postives = 303/317 (95.58%), Query Frame = 2
Query:    2 DLEYPGFEVEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRL 952
            DLEYPGFEVEDQVWNRLLELR SKI KE+EL+KQ RLFA+MKRKLEALQADC+SVD+QV VIE+RKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTN+EIRKLGGEKVRTLNKIKQFRK+INLMQW HTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGD GEKDKELVQKTEARVEMMER+HESKT KARQ NAKIAQQLQER DENRRV+GQL QL+TSVK REAI RS M+++GG+INPAQQ+AGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARN L
Sbjct:   79 DLEYPGFEVEDQVWNRLLELRGSKIGKELELRKQHRLFAIMKRKLEALQADCDSVDSQVTVIEKRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNEEIRKLGGEKVRTLNKIKQFRKNINLMQWDHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDRGEKDKELVQKTEARVEMMERSHESKTNKARQANAKIAQQLQEREDENRRVNGQLGQLATSVKVREAIFRSHMESSGGEINPAQQSAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNNL 395          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A6H5KRL2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRL2_9PHAE)

HSP 1 Score: 338 bits (867), Expect = 1.790e-107
Identity = 200/268 (74.63%), Postives = 217/268 (80.97%), Query Frame = 2
Query:    2 DLEYPGFEVEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYG--DSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQ 799
            DLEYPGFEVEDQVWNRLLELR SKI KE+EL+KQ RLFA+MKRKLEALQADC+SVD+QV VIE+RKRAISERAYLAEKNIEVLVKLKQ       G VV  +   D V++                  +VRTLNKIKQFRK+INLMQW HTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGD GEKDKELVQKTEARVEMMER+HESK       NAKIAQQLQER DENRRV+GQL QL+TSVK REAI RS M+++GG INPAQQ
Sbjct:  455 DLEYPGFEVEDQVWNRLLELRGSKIRKELELRKQHRLFAIMKRKLEALQADCDSVDSQVTVIEKRKRAISERAYLAEKNIEVLVKLKQV------GLVVQCFPLRDVVIV------------------QVRTLNKIKQFRKNINLMQWDHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDRGEKDKELVQKTEARVEMMERSHESKA------NAKIAQQLQEREDENRRVNGQLGQLATSVKVREAIFRSHMESSGGDINPAQQ 692          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A7S2CAS4_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CAS4_9STRA)

HSP 1 Score: 300 bits (767), Expect = 1.350e-91
Identity = 161/315 (51.11%), Postives = 237/315 (75.24%), Query Frame = 2
Query:   26 VEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRLISCPDD 970
            +++ VW++L ELR +KI KE E+K Q  LF  MK++++AL      + +++A +E  K A++ +  LA++N+E+LV LKQGQ+E+ + A+VTD+ + +LIP+  V+  ND I+ LG +KV+ L++IK+FRKSIN M+W H+Y++ Q+K+   Y+IDLQLL+VTK +QA++KGD   K +E ++K EAR+E+++R H  K  K +   AK++Q ++ER  EN R+  QL  L  SV+ REAI+RS++D++GG++NP QQAA RMKRIT RRRL+DLAR QT EI+ L++ELDRLRQRTFPSFAHAARNRL+  PD+
Sbjct:  490 IDEMVWDKLQELRKAKIVKEAEVKTQTALFNEMKKQVDALLEQEAGLASEMASLEAEKDALASKVKLADRNLEMLVWLKQGQNELQQEAMVTDWSEGLLIPTTRVSKCNDTIKALGADKVQILHRIKKFRKSINYMEWEHSYMETQIKNLNEYFIDLQLLKVTKSIQAIMKGDTQNKAREKMEKAEARIEILKRVHGDKADKIKGLIAKLSQSVRERRSENERLVVQLKDLDGSVQVREAIYRSRVDSSGGEVNPMQQAATRMKRITMRRRLIDLARVQTEEIDFLRSELDRLRQRTFPSFAHAARNRLLLPPDE 804          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A835YXJ9_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YXJ9_9STRA)

HSP 1 Score: 261 bits (666), Expect = 1.130e-74
Identity = 174/396 (43.94%), Postives = 232/396 (58.59%), Query Frame = 2
Query:    2 DLEYPGFEVEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVKLKQGQDEV-----------------------PRGAV----------VTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQ--------------------------AVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQL--------------QERLDENRRVSGQLVQLSTSVKAREAIHRS------KMDANGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRL 952
            DLEYPGF+VEDQVWNRL+ELRA+K+ KE ++K++QR  A  +R+LEAL  D ++    V  +ERRKRA+S RA L E+N+EV+ +L+QGQDEV                        R  V          ++DY D++L+P+ +V   ND I KL  +KV+ L++IK+FRKSI L QW    L+ Q +D + YYIDLQLLRVTKKLQ                          A+LKGD   +++E V + EAR+E M R+HE K    RQ + ++A  +                        + QL  L  +V+AREAI         +++A GG I+PA +AA +MKR+TTRRRL+DLARAQT EIE+LK ELD LRQRTFPSFAHAAR R+
Sbjct: 1678 DLEYPGFDVEDQVWNRLIELRAAKMAKEADVKRRQRAHADQRRRLEALSVDVDAAQAHVDALERRKRAVSTRALLGERNLEVVARLRQGQDEVLAAXXXXXXXXXXXXXXXXXXXXXRARVSDLGEGISVSLSDYADALLLPTQVVESRNDAIHKLSADKVKVLHRIKEFRKSIALHQWDSARLEAQCRDLDQYYIDLQLLRVTKKLQXXXXXXXXXXXXXXXXQSLCVTKKLQALLKGDHTTREREAVMRLEARMEGMARSHEDKV---RQNSVRLAAAVLMAXXXXXXXXXXXXXXXXXXXXXALQLDDLHEAVEAREAIXXXXXXXXXRVEALGGLIDPATRAADKMKRVTTRRRLIDLARAQTDEIESLKQELDALRQRTFPSFAHAARARI 2070          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A7S4DB68_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DB68_HETAK)

HSP 1 Score: 237 bits (604), Expect = 1.580e-73
Identity = 139/252 (55.16%), Postives = 171/252 (67.86%), Query Frame = 2
Query:  245 VLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMD------ANGGQINPAQQAAG--RMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRLISCPDDRF 976
            VLV+LKQGQDEV   AVVTDYG + L+P+ +V   N EI   GGEKV+ LNKIK FRKSIN +QW   +L  +V+D E Y+ DLQLLRVTK LQAVLKGD  E DK++V++ EA+  ++  AH  +  K +  NA+   Q++ER  EN R+  Q  +L  SV  R +IHR++ D      A GG    AQ      RMKRIT RRRL+DLARAQT EIEAL+ ELDRLRQRTFPSFAHAAR RL   PD+ +
Sbjct:    2 VLVRLKQGQDEVKPEAVVTDYGGAALLPADLVRQKNAEILAAGGEKVKILNKIKNFRKSINYLQWEKNHLQVRVRDLEEYFTDLQLLRVTKDLQAVLKGDAAETDKKVVERYEAKTRLLTAAHADRARKLQAANARALGQVREREAENERLRAQYDELERSVAVRRSIHRTRADGATAPGATGGTAAAAQAQXXXXRMKRITLRRRLIDLARAQTEEIEALRLELDRLRQRTFPSFAHAARTRLAGNPDEEY 253          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A7S1UCA8_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCA8_9STRA)

HSP 1 Score: 237 bits (604), Expect = 1.990e-66
Identity = 148/308 (48.05%), Postives = 205/308 (66.56%), Query Frame = 2
Query:   26 VEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVK-LKQGQDEVPRGAV--VTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGD-GGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHA 937
            VE  V +RL +LR +KIH+EM ++++      ++++ + L  + + V T++A +E  + A+ E AY A K    LV  L QGQDE P  A   + DY D+ LI   +V + N  IR+LG EKV+TL K+K +RK IN M+W + Y+D Q +  E  Y DLQLLRVTK LQA LKG+ G EKD+E V+K EAR+ ++ + H++K  +  Q   K+  QL++R  EN R+  QL +L T+V  RE I+RS+++++GG   P   AA RMKRIT RRRLVD+ARAQT EI+ L+ ELDRLRQRTFPSFAHA
Sbjct: 1094 VEPHVLDRLQQLRITKIHREMMIRRKNLELTALRKQNDRLLDEQDEVATKIARLEAERTALRE-AYAARKWDPTLVMALAQGQDESPAVAHKGIHDYDDAQLIAVNLVENINKSIRRLGDEKVKTLTKMKDYRKRINYMEWENQYMDMQERAIELKYKDLQLLRVTKNLQAALKGEVGAEKDRERVEKLEARMAVISKTHKNKIERTSQQTRKLGAQLRDRTTENARLLRQLRELETAVSVREGIYRSRLESSGGDATPEAMAATRMKRITVRRRLVDIARAQTDEIDYLRNELDRLRQRTFPSFAHA 1400          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A8J2WXW7_9STRA (Cilia- and flagella-associated protein 43 n=4 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WXW7_9STRA)

HSP 1 Score: 215 bits (547), Expect = 8.450e-59
Identity = 139/318 (43.71%), Postives = 195/318 (61.32%), Query Frame = 2
Query:   29 EDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESV--DTQVAVIERRKRAISERAYLA--EKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDK-ELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRLISCPD 967
            +D  W  LL  R  K+ KE  +         +K K     A+   V  D +  +++ RKR    RA LA  E N E+LV+++QGQ+EV   A VTDY D++ +P   +   N  I +LG E+++TL KIK FRKSIN M+W  ++L  Q  D E YY DLQLL VTK LQ+VLKG+       E + + EAR+ ++ +A+E K      TN+K+ QQ+Q R DEN+R+  QL Q++ ++  REAI RS++++   + N  Q+    MKRIT RRRL+DLA+ QT E+E L+ ELDRLRQRTFPSF HA R+R ++  D
Sbjct: 1272 DDTTWQMLLSSRKHKVAKEAMISDAAETLGNLKAK----HANSLVVFGDIEQEIVKLRKRQAKIRAELATSEVNCEILVQVRQGQNEVDAEAAVTDYFDAIFLPVETIQGINQVITQLGTEQIKTLTKIKHFRKSINYMEWESSFLKAQSHDLEEYYTDLQLLHVTKSLQSVLKGNQSTTAAPEQIAREEARISILIKANEKKLSTLTNTNSKLVQQIQAREDENKRLHLQLNQINDAIIVREAITRSQLNSFTEEANAEQRTRYHMKRITLRRRLIDLAKLQTEEVEFLRQELDRLRQRTFPSFGHATRDRHMALSD 1585          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A7S2UYJ1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYJ1_9STRA)

HSP 1 Score: 180 bits (456), Expect = 3.880e-52
Identity = 97/191 (50.79%), Postives = 133/191 (69.63%), Query Frame = 2
Query:  188 ERRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLKGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSK 760
            E  K A+  +  L  +N+EVLVKLKQGQDEV + AVVTDY DSVL+P   +   N EI   G  KV+TL+KIK FRKSIN M+W H YL++QV D E Y+ DLQLLRVTK LQ+++KGD  E DK++V++ E + ++M + H  K  K + ++ K+ QQ++ER  EN ++  QL +L +SV  RE+IHRS+
Sbjct:    1 ENEKDALLSKIELGSRNLEVLVKLKQGQDEVEQEAVVTDYSDSVLLPIQAIQRKNTEILDRGQSKVKTLHKIKNFRKSINYMEWEHRYLEDQVHDLEEYFTDLQLLRVTKSLQSIIKGDQTESDKKIVERYEHKTQIMAKNHSEKVAKLQLSSTKLLQQIEERQGENDKLKQQLNELESSVAVRESIHRSR 191          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A0P1B4M1_PLAHL (Cilia- and flagella-associated protein 43 n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1B4M1_PLAHL)

HSP 1 Score: 177 bits (450), Expect = 7.090e-46
Identity = 126/310 (40.65%), Postives = 186/310 (60.00%), Query Frame = 2
Query:   17 GFEVEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLA-EKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVL-KGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDANGGQI---NPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFA 931
            G  +ED+ W  L  LRA KI  E  +++Q  + A+ K   + L++    +  Q    ++++   S R Y A  ++  +LV++KQGQDE     V T   D++L+    V   N+EI+  G ++V  L +IK FRKSIN+M+W H  L+ Q +D +  Y D+QLLRVTK+LQ +L  GD   K K  V   EA++  + R HE+  LK  +T ++  +QL+ER  EN ++  Q+ QL+T VK RE I  S+  A   Q      A++ A R+K I  RR+LVDLA+AQT EIE L++ELD++R+RTFPSFA
Sbjct: 1503 GVLIEDRFWRALNSLRAKKIIAEHAVQEQSEMLALAKTINDELRSHLLELQ-QRRKNQQQELESSSRQYTALTESAPLLVRIKQGQDECQ---VKTTRDDALLVSRMSVEALNEEIQMHGNDQVSILGRIKDFRKSINVMEWEHALLELQTRDMDEQYTDIQLLRVTKELQELLHSGDTSHKQKRQVAMLEAKLTHLSRNHETTVLKLEKTGSQYERQLRERERENDKLEQQVTQLTTQVKIREDILTSRTSAAKRQQAAGGGARKDATRLKAIAVRRKLVDLAKAQTNEIEYLRSELDKMRRRTFPSFA 1808          
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Match: A0A3F2RUE6_9STRA (Cilia- and flagella-associated protein 43 n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RUE6_9STRA)

HSP 1 Score: 175 bits (444), Expect = 4.320e-45
Identity = 122/315 (38.73%), Postives = 177/315 (56.19%), Query Frame = 2
Query:   17 GFEVEDQVWNRLLELRASKIHKEMELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEKNIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKVRTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVLK-GDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDENRRVSGQLVQLSTSVKAREAIHRSKMDA-------NGGQINPAQQAAGRMKRITTRRRLVDLARAQTGEIEALKAELDRLRQRTFPSFAHA 937
            G  +ED+VW  L  LRA KI  E  +K++  L A+ K   + L      +  Q    +R + +++ R     ++  +LV++KQGQDE P G    +  D++ +    V   ND I+  G ++V  L +IK FRKSIN+M+W H  L+ Q +D +  Y D+QLLRVTK LQ +   GD   K K      EA++  + +      LK  +T  ++ +QL+ER  ENR    Q+ QL+T V+ RE I  S+  A        GG +      A R+K I+ RR+LVDLA+AQT EIE L+ ELD++R+RTFPSFAHA
Sbjct: 1252 GALIEDRVWRALNALRAKKILSEHAVKEKAELLALAKTVSDELDTKLSELHRQHRHQQREQESLAHRRTALSESAPLLVRIKQGQDEAPVGG---NGDDALFVARTSVEALNDVIQLHGKDQVGILGRIKDFRKSINVMEWEHALLELQARDMDERYTDIQLLRVTKDLQELFHTGDTSHKQKREAAMLEAKLTHLSKHQHITLLKLERTGNQLERQLRERERENRNFQQQVAQLATQVQIREDILTSRTSAAIRQQTAEGGAVRGN---AARLKAISVRRKLVDLAKAQTDEIEYLRLELDKMRRRTFPSFAHA 1560          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig1008.5.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G902_ECTSI2.340e-18790.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KRL2_9PHAE1.790e-10774.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A7S2CAS4_9STRA1.350e-9151.11Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YXJ9_9STRA1.130e-7443.94Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S4DB68_HETAK1.580e-7355.16Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S1UCA8_9STRA1.990e-6648.05Hypothetical protein n=1 Tax=Phaeomonas parva TaxI... [more]
A0A8J2WXW7_9STRA8.450e-5943.71Cilia- and flagella-associated protein 43 n=4 Tax=... [more]
A0A7S2UYJ1_9STRA3.880e-5250.79Hypothetical protein (Fragment) n=1 Tax=Fibrocapsa... [more]
A0A0P1B4M1_PLAHL7.090e-4640.65Cilia- and flagella-associated protein 43 n=1 Tax=... [more]
A0A3F2RUE6_9STRA4.320e-4538.73Cilia- and flagella-associated protein 43 n=4 Tax=... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig1008contigL-digitata_M_contig1008:7882..14162 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start1
Seed ortholog2880.D7G902
Preferred nameCFAP43
PFAMsWD40
Model size1040
Max annot lvl2759|Eukaryota
Hectar predicted targeting categoryother localisation
GOsGO:0001932,GO:0001933,GO:0003674,GO:0004857,GO:0004860,GO:0006469,GO:0008150,GO:0009892,GO:0009966,GO:0009968,GO:0010563,GO:0010605,GO:0010646,GO:0010648,GO:0010941,GO:0019207,GO:0019210,GO:0019220,GO:0019222,GO:0019887,GO:0023051,GO:0023057,GO:0030234,GO:0031323,GO:0031324,GO:0031399,GO:0031400,GO:0032268,GO:0032269,GO:0033673,GO:0042325,GO:0042326,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043549,GO:0044092,GO:0045859,GO:0045936,GO:0048519,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051171,GO:0051172,GO:0051174,GO:0051246,GO:0051248,GO:0051338,GO:0051348,GO:0060255,GO:0060548,GO:0065007,GO:0065009,GO:0080090,GO:0098772,GO:1902041,GO:1902042,GO:2001233,GO:2001234,GO:2001236,GO:2001237
Exons7
Evalue2.42e-169
EggNOG OGs2CME1@1|root,2QQ39@2759|Eukaryota
Ec32 ortholog descriptionWD40 repeat
Ec32 orthologEc-15_002430.2
Cds size894
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig1008.5.1prot_L-digitata_M_contig1008.5.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig1008 7943..14077 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406610.9057608-UTR-L-digitata_M_contig1008:7881..79421682406610.9057608-UTR-L-digitata_M_contig1008:7881..7942Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig1008 7882..7942 -
1682406610.9766161-UTR-L-digitata_M_contig1008:14077..141621682406610.9766161-UTR-L-digitata_M_contig1008:14077..14162Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig1008 14078..14162 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406610.9139805-CDS-L-digitata_M_contig1008:7942..81221682406610.9139805-CDS-L-digitata_M_contig1008:7942..8122Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 7943..8122 -
1682406610.9210382-CDS-L-digitata_M_contig1008:8858..90351682406610.9210382-CDS-L-digitata_M_contig1008:8858..9035Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 8859..9035 -
1682406610.9302866-CDS-L-digitata_M_contig1008:9510..96691682406610.9302866-CDS-L-digitata_M_contig1008:9510..9669Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 9511..9669 -
1682406610.944312-CDS-L-digitata_M_contig1008:11387..114681682406610.944312-CDS-L-digitata_M_contig1008:11387..11468Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 11388..11468 -
1682406610.9525247-CDS-L-digitata_M_contig1008:11918..120351682406610.9525247-CDS-L-digitata_M_contig1008:11918..12035Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 11919..12035 -
1682406610.960095-CDS-L-digitata_M_contig1008:12553..126431682406610.960095-CDS-L-digitata_M_contig1008:12553..12643Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 12554..12643 -
1682406610.968141-CDS-L-digitata_M_contig1008:13987..140771682406610.968141-CDS-L-digitata_M_contig1008:13987..14077Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig1008 13988..14077 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig1008.5.1

>prot_L-digitata_M_contig1008.5.1 ID=prot_L-digitata_M_contig1008.5.1|Name=mRNA_L-digitata_M_contig1008.5.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=298bp
MELKKQQRLFAVMKRKLEALQADCESVDTQVAVIERRKRAISERAYLAEK
NIEVLVKLKQGQDEVPRGAVVTDYGDSVLIPSAIVNHTNDEIRKLGGEKV
RTLNKIKQFRKSINLMQWYHTYLDEQVKDREAYYIDLQLLRVTKKLQAVL
KGDGGEKDKELVQKTEARVEMMERAHESKTLKARQTNAKIAQQLQERLDE
NRRVSGQLVQLSTSVKAREAIHRSKMDANGGQINPAQQAAGRMKRITTRR
RLVDLARAQTGEIEALKAELDRLRQRTFPSFAHAARNRLISCPDDRF*
back to top

mRNA from alignment at L-digitata_M_contig1008:7882..14162-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig1008.5.1 ID=mRNA_L-digitata_M_contig1008.5.1|Name=mRNA_L-digitata_M_contig1008.5.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=6281bp|location=Sequence derived from alignment at L-digitata_M_contig1008:7882..14162- (Laminaria digitata LdigPH10_18mv male)
GGATCTCGAATACCCCGGATTCGAGGTAGAGGATCAAGTATGGAACCGGC TGCTGGAATTAAGGGCGAGCAAGATCCACAAAGAGATGGAGCTTAAAAAG CAGCAGCGTCTCTTCGCCGTCATGAAGCGAAAACTCGAGGCTCTTCAGGC CGACTGTGAATCTGTCGACACGCAGGTGTGTAAAGGTTAAGGTTGTTGCT TTATGCGTACGCAGAGTATGCCCTCGCAAGTTTGTTTACTGGGCGGGCCC TCGTTGTAAAGCTTGCACACGCCGGACAGATCACGATCTAGATCATCTAG ATACATTGTTATTATCCCCTTTGCCATCTGACAATGTATAGCACTTGTTC CAATCATACCATCCACATATCGAAGATCATCTAGATCATCTAGATCAACC ATTGTAGATCCCAACCTGCTGTTATGAGATGTTGTGCAGGATCTGTACAG TACAGATCCAACCCAGAAAACATGTCCTAGATCATGCAGGTTACACGACT CCCACCCGGCAACGTGAGCTAGATCATTCTGATCAGGAATATATCTGCCC TGAAAGATCTAGATCATCAGGTAGGAGCCGATGATCTGTCCGAGGTGTAA AAGGTTGTTGCTTTATGGGTATGCAGAGTATGCCCTCGCAGGTTTGGATA TTGAGCGGGTTCCTCGTTGTCACTCACCACTCACGTGTGCAGGTAGCTTT AGAGATGGACTCATTGTCATTAATATTTTTGTGTTTGCCACAGCGGACAG CGTGTTATTTGTATAGCATGAGCTTCAACGTCGACCACTCACAGACATTC CTAGAAATCAGAAGAAAAACAAGGAAATTAAAAAAAAGAAACCTATGCAT ATGCATGCGCATATGCATACGAACTTTATTATTAGCTCCCTTCCGTGCCT ACTTCCGGCTTAATATATTACTTGGAAGTATTGTTGAAGCAATATCATAG TGACTGTCGCCGACAAGTTGGACATGGTGGCACGAGGGAAACCACCGACC TTGACGTCGTCCATTATCACAGCAACTACTGCAACTACTGCTGTATGATT ACGTAGGGTAGCTCCCGCTGGGAACTGGCGCTGGCGCTGGTGGATATTTG TAACTGTCGTCTGTCGTCAACTGTGTGGGCCGGTGAAAGGCGCAAATTAA ACCAACAAATCGGAGAATTTCGGTCGGGCAGTGCGGATCTCCGGATTCTT ATGTCCTCGTATTCATACAGGATCTCCGGCCTCACCTAGCTCGAAAGGGG GACCGTGTGAATTAGCAAATCGCTTCGCTCGTACTGTTTTGCGCGTCCTC TCCGTCGTCGCCCTCTTTGAAGCTACACTCTTGTTGTCCGCCATCGCGGC CGCCACTGAGAAGGACAAGAAAATATATATTTTTGTCAGATCAGGTCAGA TGTTCAACGTCGTCAGGGACAGCAGGCGTGTTTAGCGCAGGAACAGAGCA CGACATGGCTTTCTATTTTTGTGGCTTGCGTTGCGTACGACATTGATTTG TCTCATTTTCTTATGCCAGGTAGCGGTTATCGAGCGACGGAAGCGAGCTA TCAGCGAACGTGCCTACCTCGCCGAGAAGAACATCGAAGTCCTCGTCAAG CTTAAACAGGTGCAGTTTACGAGTAGCTTCAACGGGTGTGGTTAGACAGG TGCGGTCTAGCTCACATAGGTGCGGTCTAGCTTAAAACAGGTGCGGTCAA GGTAAAACAGGCGAGTTCTAGCTTAAACAGGTGCGGTCTAGCTTAAACAG GTGTGGTCAAGCTTAAACAGACAGGCCTTGTCGGACAGCCGGAGTGAGTT GTTGAACGGCGAATGAACACTTGCACTGTGCAAAGGAAAATAGACGGCGC TAATGTGTCGTTCATGTTCAGTGTAAAAATAGGAAATCGCTAGGGAACGA CCAGTGCCCGGTCGGCTCTGGTAGGTGTACACCATAACCACTGAGCTAGC ACTCAGCACCGACTGCTGTCATAGCTCAGTGGATCTGGTGTATCTCTAAC CGGCTCGTGCGAGTATAATAAAAAGCTGCCCGCAACTCTCTGTTGTATCG TACCTTTACCGTGAAGACTTCTTTGTTTGCCGTACTCTGCTCTTATCACC TTACACTGCTGTGCTAATCGCTACCAGGGTCAAGACGAGGTACCCCGTGG GGCGGTGGTGACGGACTACGGCGACAGCGTGTTAATCCCGTCAGCCATTG TTAACCACACCAACGACGAAATCCGCAAGCTTGGCGGGGAGAAGGTGCGA GTACAGTTCATAACGAGTATTAGTTTTCATATCACTAATCAGAACAATGC ATTCCCATTTTTTCTTAGAGCCGTAACCACTGGCCGCTGGTCGAAAGCTG TGTGTGTCGTTGTGGTAGACCTTGGTAAGCGCTTCTGTAACTCGGTACGC ACAAGACGCATGGAAAAGTAGCCGACGCATGTTACTACATTCGGTAGACC ACAGGCGAGCGCATCGCCGCCTGTGTTTCCGGTCGCACGAAAACGTTCGG AGCTTTCAACTCTCGGCCTCAAGGTCGACGTTTCTCGAGCGCATGCAGTA CAGATGCACCATCAATGGCTTGTATTGTGCCAGGTATGAGGTATGATATG TATGATATGTTCGTGGCACTTATTATACACAAACGGATGCACGGCCAACA AACTGTTTTTTTTTCATCGGCAACGATAACATATCTCACCGCAGGTTCGC ACTCTGAACAAGATCAAGCAGTTCCGGAAGAGCATCAACTTGATGCAGTG GTACCACACCTACCTTGACGAACAGGTGAGCCGCTCAATTAACCCCGAAT ATCTCAGATGACGGTGAGGCAACTCCCTCGGATATCTCAGACGACAATTT CGCCATTACAGCCGCGGCATTCAGTGCATGCCTTTCGGAAGCTTGAGAGA TTACATCGTGGTGGATCGTAACCGATTTATCGTCTGACGAGCCAGCTCTA CCCGAATCGCGAAAATGTGTGTCTGTGTGTGTTTTTAGTCCCCCGGAGAC CACGGAGGAAGTCCGTGCCCACACTTACTTTATTGGTACCCGCATTTTTG TGTTTAGATTACAGTTTCCCTTGGTCTGCTTGGTCTTTTTGGGGATGCTT ATGAGTGATCGACGTTGAAGCTCAGCTGCACATTATCATCGGATGGCAAT TATAATTGAAAAATTGCTGCTCGAATGACTACCCCTTGCGCAACAAAATG TTTGGACAACCAAACGCCTTCATGTATGTCCTATGTCGTGTCTCTCTCCA CGGATATTACCTCTTAATCTCTTTCATCGGGGAACAACATCAAACTACGA GTACGAGCGTACCTGCTACTGGCGATGTATATACTCGCATGTGGCTTGTG GCAGGCCTGCTGAGTTACGGCAGACAATCTACAACAGAAGGCAAGCACTC AGTCGGTGTTACCCGACAGGTAGCATGAACTCCGGCTCCGCAGAGCTGGT CAAAGGGATGGCTATGGTCGCCAGGGGACATCCGGGCTACATCCCCGGGT TTGGCCTCGGGATCTCGTAATTGATGTAGCTCTCAAGTGTGTGACCAGGG TGACCGTATCACTCGGGTGCTTCAGCGATGCAGGCCCTGACCTGAGCGTG GTCATCCGGGACTAGGGCAAGCTGTGATGGTATTACCTACTGAGCTATGG GAGTGTTATAACACCCCCCCCCCTCTGAACGGCGGGATCTTTGGGACGTA ACGGTACCGTACACGGCCGTACGTGGACCTACGCGCTGCGTTTCAATACC TGGGGAATCAGGGAGACATGTGTTTTAGGGACGCAAGCGCAAGCGTTTCA ATAAAAGAAACGTACAAAGTGAGACTCGAACCCGTGTCCTCGACGACGTC AAATGTGATGGTATTACCTACTGAGCTATGGGGGTGACATATCGATCGAT TACCCTGCTCAGGGTAATCCTTATAACAAAGCGGTACCGTATAACACGCA AGATAACACACACACCCTGGGACCAATTTCACAGCCGATTGTCTCCCAAG CATGGGAGACACACACAACGAAAATGGTGGCTTTTGGAAAGATCTCGTCG AGACCTCTCTATAGACGCGTCGCGCGGCGCTTACACTCTCCCCGTTGTCG AGAAAATCAGATTGGAAATTCGTCCATGGGGGTTTGTTATCATGCGTCTT ATACGGTAGGGGGGTGACTTCTAGGGTCACGGTTTTCAGCGGCTCAGAAC CACTCGCTCGAATGGCCAACCCCGTTGGTTTGCAGTCTTAAAGGTTTTGT GCTTCTCGGTTTCGCAATATGCACCGCAATGGAATGGAATTGTTTCTTAC GCTGCGCCGAAACAAGGTGTTTAAGTTCGTTTTCGAATGAGGTACGTACA GAGCCACTCGCGAGAGCCCTAACATCGATAGTCAAAATGGAGGCACCCCC CCTACCTTAGCCTTGGTCCCGGCTTGGCCTTAAATATCTGTACCTGTTTC GTCCACTGGCTACGCGCTACCCCCTTGCGTGCTCCGACCTTAGGTTAAGG ACCGCGAGGCCTACTACATCGACCTGCAACTCTTGCGAGTAACGAAGAAA CTCCAGGCAGTGCTCAAGGGCGACGGGGGGGAGAAGGACAAGGAGCTCGT GCAAAAGACGGAAGCCAGGGTGGAGATGATGGAGAGGGCGCACGAGTCCA AGGCAAGGCGAAAACGGACAAATGGTGTTGGGAGAAGTCCGCCATGCCCC CCTCGGTTTAGTCTACAAATCTAAAAACATTTTAACGTATATATAGCTGA GCGGCAAAAACCACTCTAAATCTGCGTCAAAGAGCAATAAAAAGCTCAAA TTACGTAACGACGTCGATTTAGTTTACAAAAATGAGTTTGATTAAGGCTG AGCGGCAAACACCACGATCGTGGGGCAATATGCGTAGGACAGCCTACGTC CGCGTGAAGTCATCGAACCCTCGAGTGAGGCATACATCAGCCTTTTTCCG TACGCGTTTGTTCGCACTACATGCCCCGCAACATCACACGCCCCCCCCCC CACGGGTACGGGTGATATGATGGGCAATCTCCGCCACCTTTACTTACGCC AGTCTGGTGGAAATACCATCGATCGAAGCCCGACTTGCTGAGATTGTTTA AACCTTGCGCGCTTCATGATTTCGCAGACGCTCAAAGCAAGGCAGACGAA CGCTAAGATCGCGCAACAGCTCCAGGAGCGTTTGGACGAAAATAGGAGAG TCTCCGGGCAGCTGGTGCAGCTCTCCACCAGCGTCAAGGCCCGCGAAGCC ATCCATCGGAGCAAGATGGACGCAAATGGCGGACAAATCAATCCGGCGCA ACAGGTACCCTATGTACTCACCAAGGACACGTACAGTACCGGCCCTCTAA CAAGAAACGGGGTTACCGAGCCAGGGTCGATTTCTTATTTGAGAAAGGGT GTATTCCACACTAACTTTAGTATAAAAGCTCCCGAATATCTTACTTTCCC GGAAAATATAAGTCTGGGTTTCTTGTGGGGCTTTTTCTTATGACATGGCC GATAGTGCAATTGGTTGCTACACCCATCAATCCAATCAAAACCAGGCGTG GAAAATTTGAGTGCCTCGAGAGCCCATAAGGGACGAGGCATCACCTATTT TATACCAGGGTACCTGGTATGCCGTATTTGTGCTCAGTAGTGCATGACTG CGCTGTGTATTATATGGTGCCATCCCTCTCCTGGAATCATCCTCCCCTGG CTTCAACTCAAGCGGCTCACATCTGACTCTCATAAATCGTTGAAGTTTTT GCATGACTCGACAGCATCGAGTAAGTGAGGAAAGGCGCATCTCACCTGTA CCGCCTTACGTGGAACACCGTATGTACTGCACCACTGTAGCTGTGCTGTA TATGAAATCATCACTCGCCTGACATAACCCCCCCCCCCCAAATGTTATAT CTACTTAACTCATAACCCCACCCCCCAAATATTATATCTACTCAACTCAT AACCCCCCCCCCCAAATATTATATCTACTTAGTTCCCACATGAATTCCCC TCCGTGGAACTCCTTCTCTGGGCCTTCGATAATGCAACAGGCCGCCGGGC GAATGAAGCGCATCACCACCAGGCGGCGTCTCGTCGACCTCGCCCGGGCC CAGACGGGGGAAATAGAGGCCCTGAAAGCGGAGCTGGACAGGCTTCGTCA GAGAACCTTCCCGAGCTTCGCGCACGCGGCCCGGAACCGCCTGATTTCTT GCCCGGACGACCGCTTTTAACCCTTTTGCGACTGCGCTGTATGTATGAGT ATGCACATTTGTGATTTTTTCGTCTGTTTTC
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig1008:7882..14162-

>mRNA_L-digitata_M_contig1008.5.1 ID=mRNA_L-digitata_M_contig1008.5.1|Name=mRNA_L-digitata_M_contig1008.5.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=894bp|location=Sequence derived from alignment at L-digitata_M_contig1008:7882..14162- (Laminaria digitata LdigPH10_18mv male)
ATGGAGCTTAAAAAGCAGCAGCGTCTCTTCGCCGTCATGAAGCGAAAACT
CGAGGCTCTTCAGGCCGACTGTGAATCTGTCGACACGCAGGTAGCGGTTA
TCGAGCGACGGAAGCGAGCTATCAGCGAACGTGCCTACCTCGCCGAGAAG
AACATCGAAGTCCTCGTCAAGCTTAAACAGGGTCAAGACGAGGTACCCCG
TGGGGCGGTGGTGACGGACTACGGCGACAGCGTGTTAATCCCGTCAGCCA
TTGTTAACCACACCAACGACGAAATCCGCAAGCTTGGCGGGGAGAAGGTT
CGCACTCTGAACAAGATCAAGCAGTTCCGGAAGAGCATCAACTTGATGCA
GTGGTACCACACCTACCTTGACGAACAGGTTAAGGACCGCGAGGCCTACT
ACATCGACCTGCAACTCTTGCGAGTAACGAAGAAACTCCAGGCAGTGCTC
AAGGGCGACGGGGGGGAGAAGGACAAGGAGCTCGTGCAAAAGACGGAAGC
CAGGGTGGAGATGATGGAGAGGGCGCACGAGTCCAAGACGCTCAAAGCAA
GGCAGACGAACGCTAAGATCGCGCAACAGCTCCAGGAGCGTTTGGACGAA
AATAGGAGAGTCTCCGGGCAGCTGGTGCAGCTCTCCACCAGCGTCAAGGC
CCGCGAAGCCATCCATCGGAGCAAGATGGACGCAAATGGCGGACAAATCA
ATCCGGCGCAACAGGCCGCCGGGCGAATGAAGCGCATCACCACCAGGCGG
CGTCTCGTCGACCTCGCCCGGGCCCAGACGGGGGAAATAGAGGCCCTGAA
AGCGGAGCTGGACAGGCTTCGTCAGAGAACCTTCCCGAGCTTCGCGCACG
CGGCCCGGAACCGCCTGATTTCTTGCCCGGACGACCGCTTTTAA
back to top