mRNA_L-digitata_M_contig100716.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI00139601CD (uncharacterized protein LOC6627370 isoform X45 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI00139601CD) HSP 1 Score: 65.5 bits (158), Expect = 1.030e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 13720 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 13945
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI001395F3B9 (uncharacterized protein LOC6627370 isoform X44 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI001395F3B9) HSP 1 Score: 65.5 bits (158), Expect = 1.030e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 14251 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 14476
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI001395CE72 (uncharacterized protein LOC6627370 isoform X40 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI001395CE72) HSP 1 Score: 65.5 bits (158), Expect = 1.030e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 14966 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 15191
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI001395ED9E (uncharacterized protein LOC6627370 isoform X43 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI001395ED9E) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 16630 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 16855
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: A0A0Q9W9U1_DROVI (Uncharacterized protein n=1 Tax=Drosophila virilis TaxID=7244 RepID=A0A0Q9W9U1_DROVI) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 16718 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 16943
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI0013960B98 (uncharacterized protein LOC6627370 isoform X38 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI0013960B98) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 17167 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 17392
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI001395ECC9 (uncharacterized protein LOC6627370 isoform X31 n=2 Tax=Drosophila virilis TaxID=7244 RepID=UPI001395ECC9) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 17669 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 17894
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI0013964AE4 (uncharacterized protein LOC6627370 isoform X35 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI0013964AE4) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 17712 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 17937
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI00139619BF (uncharacterized protein LOC6627370 isoform X46 n=1 Tax=Drosophila virilis TaxID=7244 RepID=UPI00139619BF) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 17729 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 17954
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Match: UPI00139613C6 (uncharacterized protein LOC6627370 isoform X29 n=3 Tax=Drosophila virilis TaxID=7244 RepID=UPI00139613C6) HSP 1 Score: 65.5 bits (158), Expect = 1.040e-8 Identity = 66/255 (25.88%), Postives = 96/255 (37.65%), Query Frame = 1
Query: 22 GVCRQ----RPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVSDADCVA--NGLVCDTQAGSPSMGY--CQNGMPCPMGTECGAGQVCQAGVCVGENCQNNPALCGANETCDPVTLMCVPNQGGTCTQDTDCQAGYYCNTSSSTCQVGCRDNSECPGGVCNASNQCEYPT--GQFCGP----------------------------------CMVDTDCPAGARCVDNPFAGKICYEQCSTLLMQPCSDP 654
G CRQ P C++D+DC + A VN R+C + C ++A C + VC Q G Y C++ + C + EC +G+ C G C+ NP L N+ C P V + C C +GY N +GC N++CP + QC P C P C +DTDCPA C++ C + C L+++PC P
Sbjct: 17935 GECRQLVLQSPPGCESDLDCNEQEACVN---------RQCRNPCNCGTNAICHVQQHRAVCSCQDGFEGNPYAACRS-IGCRVDGECDSGKACINGNCI------NPCL--LNDPCGPNAECYVQSSRAQCR----CLSGYRGNPYERCRVIGCSSNNDCPTDKTCQNEQCVNPCVYHNVCAPRAECRPQNHMAVCRCPSNFLGNPYVDCRPQPQPVCKLDTDCPARLACINEQ-----CVDPC--LVLEPCQRP 18160 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100716.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100716.1.1 >prot_L-digitata_M_contig100716.1.1 ID=prot_L-digitata_M_contig100716.1.1|Name=mRNA_L-digitata_M_contig100716.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=218bp DIQGAPPGVCRQRPDECQTDMDCFDNGAFVNKFCTIANPPRRCIDAPTCVback to top mRNA from alignment at L-digitata_M_contig100716:36..689+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100716.1.1 ID=mRNA_L-digitata_M_contig100716.1.1|Name=mRNA_L-digitata_M_contig100716.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=654bp|location=Sequence derived from alignment at L-digitata_M_contig100716:36..689+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100716:36..689+ >mRNA_L-digitata_M_contig100716.1.1 ID=mRNA_L-digitata_M_contig100716.1.1|Name=mRNA_L-digitata_M_contig100716.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=654bp|location=Sequence derived from alignment at L-digitata_M_contig100716:36..689+ (Laminaria digitata LdigPH10_18mv male)back to top |