mRNA_L-digitata_M_contig100705.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A2E8XQ33_9PROT (DUF4174 domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XQ33_9PROT) HSP 1 Score: 125 bits (315), Expect = 1.150e-33 Identity = 60/116 (51.72%), Postives = 85/116 (73.28%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
MD++ W+ RP++V AP LV AQR++L Q +A + RDM+ +E++GD+V+I+G+ + A +R RY + GEA ALLVGKDGGVK++S +A SA ELF TIDAMPMR+RE+
Sbjct: 106 MDSFRWHNRPLVVFAPAPRNPLVAAQREVLDRQGYAFRERDMILVEVIGDRVSINGRVTRGLDADAMRARYRVEAGEACALLVGKDGGVKLRSESAFSADELFGTIDAMPMRQREV 221
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A2E4XVZ9_9PROT (DUF4174 domain-containing protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4XVZ9_9PROT) HSP 1 Score: 108 bits (271), Expect = 2.050e-27 Identity = 52/119 (43.70%), Postives = 77/119 (64.71%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREMNTG 369
M+AY W RP+++ P A L+ +QR+ L+ + L+ RDMV IE++G+++T+DG P + A +R R + +L+GKDGGVK++ ISA LF+TIDAMPMRR+EM G
Sbjct: 72 MNAYLWQNRPLVILVPDAQDDLLVSQREALAGRAADLKDRDMVIIEVIGNKLTVDGATAPKLTAEHLRRRLNAQAHLTETILIGKDGGVKLRRPAPISAGTLFQTIDAMPMRRQEMGRG 190
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A7X0H4N1_9BACT (DUF4174 domain-containing protein n=1 Tax=Algisphaera agarilytica TaxID=1385975 RepID=A0A7X0H4N1_9BACT) HSP 1 Score: 95.9 bits (237), Expect = 4.240e-23 Identity = 52/122 (42.62%), Postives = 77/122 (63.11%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVTIDGKAMPDIAASQ-IRDRYGIRKGEALA-LLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREMNTGN 372
MD + W+ RP++V A + QR++L+A + L RDMV IE++GD +T+DG+ P A + +R RYG+ A A LLVGKD GVK++S ++A +F ID+MPMRR+EM +
Sbjct: 1 MDEFAWSHRPLLVFATSVEEPALLEQRELLAAHREGLNERDMVVIELVGDDLTVDGQ--PRTADTHALRKRYGVPTSRAFAVLLVGKDTGVKLRSDRPVTAEGVFGLIDSMPMRRQEMREAS 120
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: UPI0019065B8D (DUF4174 domain-containing protein n=1 Tax=Rhodovibrio sodomensis TaxID=1088 RepID=UPI0019065B8D) HSP 1 Score: 95.5 bits (236), Expect = 1.250e-22 Identity = 49/117 (41.88%), Postives = 71/117 (60.68%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQ-VTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
M + W RP+++ AP A ++ Q +I + + RDMV I + GD+ VT+DG D+A + +R RY + + A+LVGKDG K++ I A +LF+TIDAMPMRRREM
Sbjct: 25 MQRFQWQNRPLLIFAPAAGGPALRRQLEIAATHAEGWRDRDMVTIVVAGDRPVTVDGTRAKDLANAALRQRYDVPEDRFAAILVGKDGTQKLRRDGLIPASKLFQTIDAMPMRRREM 141
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A0D3LH44_9BACT (DUF4174 domain-containing protein n=1 Tax=Flammeovirgaceae bacterium 311 TaxID=1257021 RepID=A0A0D3LH44_9BACT) HSP 1 Score: 94.4 bits (233), Expect = 2.130e-22 Identity = 48/119 (40.34%), Postives = 69/119 (57.98%), Query Frame = 1
Query: 7 PLMDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVTI-DGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
PL+D Y W R +++ AP + Q + L Q+ LQ RD++ I GD++ + DGK + A +R Y I E LL+GKDGG K++S ++ LF+TIDAMPMRR+EM
Sbjct: 7 PLLDQYQWKNRLLLLYAPDEEDESYRNQSRELQKQERGLQQRDLLTFHIFGDKIVLPDGKILGQTDARDLRQHYVIPPKETAILLIGKDGGEKLRSRDLLTTERLFQTIDAMPMRRQEM 125
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A1G7TQT1_9HYPH (DUF4174 domain-containing protein n=1 Tax=Limimonas halophila TaxID=1082479 RepID=A0A1G7TQT1_9HYPH) HSP 1 Score: 94.4 bits (233), Expect = 3.180e-22 Identity = 50/117 (42.74%), Postives = 70/117 (59.83%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGD-QVTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
M+ + W RP++V AP A+ + QR I A + RDMV + + GD V +DG+ D+ + +R R+G+ ALLVGKDG VK+ +I+A LF TIDAMPMR+REM
Sbjct: 22 MERFTWANRPLVVLAPDADHPALGEQRAIAEAHAAGFRERDMVVVTLAGDGPVRVDGEPARDVDPAALRARFGVAHDAFRALLVGKDGTVKLSRGESIAADTLFRTIDAMPMRQREM 138
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A369TEG6_9PROT (DUF4174 domain-containing protein n=2 Tax=Ferruginivarius sediminum TaxID=2661937 RepID=A0A369TEG6_9PROT) HSP 1 Score: 92.4 bits (228), Expect = 2.870e-21 Identity = 47/117 (40.17%), Postives = 72/117 (61.54%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQ-VTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
M+ + W KRP+++ P A+ + Q ++++ RDMV I ++GD+ V +DG+ D+ IR R + + +LVGKDG VK +S+ AI A+ LF+TIDAMPMR+REM
Sbjct: 36 MERFLWEKRPLVMTVPRADNAAYGQQLEVVANHAEGFAERDMVVIAVVGDERVEVDGRLAADLNGGDIRRRLNLPQTRFEVVLVGKDGAVKRRSTQAIPANVLFQTIDAMPMRQREM 152
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A3C0NB67_9CYAN (DUF4174 domain-containing protein n=2 Tax=unclassified Cyanobacteria TaxID=1983111 RepID=A0A3C0NB67_9CYAN) HSP 1 Score: 89.4 bits (220), Expect = 2.350e-20 Identity = 45/119 (37.82%), Postives = 74/119 (62.18%), Query Frame = 1
Query: 13 MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVT-IDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREMNT 366
+DAY WN R ++V AP+ ++S Q Q + ++ L RD++ E+L ++ I+G+++ A+Q+R R+ + E +LVGKDG K + T +S +F+ IDAMPMRR+EMN+
Sbjct: 15 LDAYKWNNRLLLVFAPNEDSSAYQQQMQRFQGKQAQLSDRDLLVFELLAQGISRINGQSITPKEAAQVRKRFNVGSQEFRVILVGKDGTAKRRDRTPVSPEVIFKEIDAMPMRRQEMNS 133
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: A0A1Z4GC02_9CYAN (DUF4174 domain-containing protein n=2 Tax=Nostocales TaxID=1161 RepID=A0A1Z4GC02_9CYAN) HSP 1 Score: 89.0 bits (219), Expect = 6.780e-20 Identity = 42/112 (37.50%), Postives = 71/112 (63.39%), Query Frame = 1
Query: 28 WNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILG-DQVTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRREM 360
W R ++V AP N Q Q ++ + ++ + RD+V +++L D+ +G+ + + + + +RDR+G+ K +LVGKDGGVK + +T + A E+FE IDAMPMR++EM
Sbjct: 47 WQNRVLLVFAPSVNNRTYQQQMQLFNQHQNGFKDRDLVLVQVLATDKSYANGQLIDESSVANLRDRFGVDKDNFRVILVGKDGGVKRQDTTPVPATEIFEQIDAMPMRQQEM 158
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Match: UPI001609668A (DUF4174 domain-containing protein n=1 Tax=Sphingomonas sp. BK580 TaxID=2586972 RepID=UPI001609668A) HSP 1 Score: 87.4 bits (215), Expect = 1.170e-19 Identity = 49/117 (41.88%), Postives = 73/117 (62.39%), Query Frame = 1
Query: 7 PLMDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDQVTIDGKAMPDIAASQIRDRYGIRKGEALALLVGKDGGVKMKSSTAISAHELFETIDAMPMRRRE 357
P + A W KR +++AAP L+Q QR+I+ A RD+ +EI+G+ VT D +AS +R+R+ + + ALL+GKDGG K++ + I+A +L ETIDAMPMRR+E
Sbjct: 18 PSLSAMKWEKRVLLIAAPGEQDPLLQQQRRIMRRWTAAAAERDLAVVEIVGNDVT----GASDTSAS-LRERFRLPRDGFSALLIGKDGGTKLRRTHPIAAADLEETIDAMPMRRQE 129 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100705.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100705.2.1 >prot_L-digitata_M_contig100705.2.1 ID=prot_L-digitata_M_contig100705.2.1|Name=mRNA_L-digitata_M_contig100705.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=121bp MDAYPWNKRPVIVAAPHANASLVQAQRKILSAQKHALQARDMVWIEILGDback to top mRNA from alignment at L-digitata_M_contig100705:329..703+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100705.2.1 ID=mRNA_L-digitata_M_contig100705.2.1|Name=mRNA_L-digitata_M_contig100705.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=375bp|location=Sequence derived from alignment at L-digitata_M_contig100705:329..703+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100705:329..703+ >mRNA_L-digitata_M_contig100705.2.1 ID=mRNA_L-digitata_M_contig100705.2.1|Name=mRNA_L-digitata_M_contig100705.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=363bp|location=Sequence derived from alignment at L-digitata_M_contig100705:329..703+ (Laminaria digitata LdigPH10_18mv male)back to top |