mRNA_L-digitata_M_contig100659.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: D8LTR7_ECTSI (3-ketoacyl-CoA synthase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTR7_ECTSI) HSP 1 Score: 161 bits (408), Expect = 1.350e-45 Identity = 75/84 (89.29%), Postives = 82/84 (97.62%), Query Frame = 1
Query: 1 AMETTLKTTSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
AM++TL+TTSR++ FDLGWKSTALFVVFVWWMSR S+PLYMVDFSTFEPPEEWKVTH+QLAEIMRRQGCFTPESVSFMEKILSK
Sbjct: 95 AMQSTLQTTSRDLFFDLGWKSTALFVVFVWWMSRGSAPLYMVDFSTFEPPEEWKVTHDQLAEIMRRQGCFTPESVSFMEKILSK 178
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A835YTW0_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YTW0_9STRA) HSP 1 Score: 98.6 bits (244), Expect = 3.100e-22 Identity = 41/75 (54.67%), Postives = 55/75 (73.33%), Query Frame = 1
Query: 25 TSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILS 249
TS + LGW++TAL V +WW+ +P+Y++DF+ FEPP WKVTHEQL EIMRRQ CFT +S+ FM +IL+
Sbjct: 81 TSPAVAVGLGWRATALVVAALWWLGHRRTPVYLLDFAVFEPPASWKVTHEQLIEIMRRQKCFTHDSIEFMARILA 155
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: F0YI68_AURAN (3-ketoacyl-CoA synthase n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI68_AURAN) HSP 1 Score: 90.5 bits (223), Expect = 2.360e-19 Identity = 36/71 (50.70%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 40 VFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
+ D+ W+ST L + VW+++R P+Y+VDF TFEPPE W++TH++L MRRQ CFT ES++F+++IL K
Sbjct: 101 LLDMSWRSTLLGLCLVWYLARHHHPVYLVDFVTFEPPESWRLTHDELMTCMRRQRCFTEESIAFLKRILDK 171
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: F0YHH3_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YHH3_AURAN) HSP 1 Score: 90.5 bits (223), Expect = 2.660e-19 Identity = 36/71 (50.70%), Postives = 54/71 (76.06%), Query Frame = 1
Query: 40 VFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
+ D+ W+ST L + VW+++R P+Y+VDF TFEPPE W++TH++L MRRQ CFT ES++F+++IL K
Sbjct: 4630 LLDMSWRSTLLGLCLVWYLARHHHPVYLVDFVTFEPPESWRLTHDELMTCMRRQRCFTEESIAFLKRILDK 4700
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A8J2S738_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S738_9STRA) HSP 1 Score: 89.0 bits (219), Expect = 8.460e-19 Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 1
Query: 40 VFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
+ D+ W+ST L + VW+++R P+Y+VDF TFEPPE W++TH+QL M+RQ CFT ES+ F+++IL K
Sbjct: 100 LLDMSWRSTLLGLCLVWYLARHHHPVYLVDFVTFEPPESWQLTHDQLMTCMQRQRCFTEESIMFLKRILDK 170
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A7S2XYV1_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYV1_9STRA) HSP 1 Score: 87.4 bits (215), Expect = 2.940e-18 Identity = 38/75 (50.67%), Postives = 53/75 (70.67%), Query Frame = 1
Query: 28 SREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
S ++FDLGWK L + + ++SR + Y+VDFS FEPP +WKVTHE+L +M Q CFT +SV FM+KIL++
Sbjct: 93 SSNLMFDLGWKLALLLGLLIAFLSRRKATTYLVDFSCFEPPNDWKVTHEELRTLMLAQKCFTEDSVGFMDKILAR 167
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A7S4DBI7_HETAK (3-ketoacyl-CoA synthase n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DBI7_HETAK) HSP 1 Score: 87.0 bits (214), Expect = 4.080e-18 Identity = 37/79 (46.84%), Postives = 57/79 (72.15%), Query Frame = 1
Query: 16 LKTTSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
L ++ + VFDL WK T L + + +++R +Y+VDF+ FEPPE+WKV HE+L +IMR Q CF+ +S+ FME+IL++
Sbjct: 118 LAPSTSDAVFDLAWKFTLLAALLLIYLARRGQNVYLVDFACFEPPEDWKVNHEELVQIMRAQRCFSDDSLKFMERILAR 196
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A482RUR0_9ARCH (FAE domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482RUR0_9ARCH) HSP 1 Score: 81.6 bits (200), Expect = 6.100e-18 Identity = 30/75 (40.00%), Postives = 54/75 (72.00%), Query Frame = 1
Query: 28 SREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
S+ F+LGW++ A+ + VW + +Y++DF+TF+ P+ WKV+ EQ+ E++R QGC+T +S+SFM+++L +
Sbjct: 22 SKPFAFNLGWQTVAILAILVWLLYNREKRVYLLDFATFDAPDSWKVSQEQIIEMLRIQGCYTEQSLSFMDRMLKQ 96
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A7S2WTL4_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WTL4_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 3.190e-16 Identity = 36/76 (47.37%), Postives = 53/76 (69.74%), Query Frame = 1
Query: 25 TSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
T + V+ LGW+ T L + V+ +R +Y++DF T+EPP +WKV+H QL EIMRRQ CFT ES++ M ++L+K
Sbjct: 78 TGKPEVWFLGWQGTFLTLTLVYLFARRERQVYLLDFCTWEPPADWKVSHAQLIEIMRRQACFTEESLNLMGRVLAK 153
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Match: A0A7S2CUL9_9STRA (3-ketoacyl-CoA synthase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CUL9_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 1.110e-15 Identity = 34/76 (44.74%), Postives = 54/76 (71.05%), Query Frame = 1
Query: 25 TSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEEWKVTHEQLAEIMRRQGCFTPESVSFMEKILSK 252
T++ V+ LGW+ + + + V+ ++ + Y+++F TFE PEEWKVTH QL E+MRRQ CF+ ES++F+ +IL K
Sbjct: 68 TAKPQVWFLGWQGSFITALLVYLFAKRPAQTYLLEFCTFEAPEEWKVTHSQLMEMMRRQQCFSEESINFLSRILDK 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100659.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100659.2.1 >prot_L-digitata_M_contig100659.2.1 ID=prot_L-digitata_M_contig100659.2.1|Name=mRNA_L-digitata_M_contig100659.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=84bp METTLKTTSREIVFDLGWKSTALFVVFVWWMSRSSSPLYMVDFSTFEPPEback to top mRNA from alignment at L-digitata_M_contig100659:472..726- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100659.2.1 ID=mRNA_L-digitata_M_contig100659.2.1|Name=mRNA_L-digitata_M_contig100659.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=255bp|location=Sequence derived from alignment at L-digitata_M_contig100659:472..726- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100659:472..726- >mRNA_L-digitata_M_contig100659.2.1 ID=mRNA_L-digitata_M_contig100659.2.1|Name=mRNA_L-digitata_M_contig100659.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=252bp|location=Sequence derived from alignment at L-digitata_M_contig100659:472..726- (Laminaria digitata LdigPH10_18mv male)back to top |