mRNA_L-digitata_M_contig100646.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A2E7C410_9GAMM (Probable membrane transporter protein n=9 Tax=Halieaceae TaxID=1706372 RepID=A0A2E7C410_9GAMM) HSP 1 Score: 265 bits (677), Expect = 2.170e-87 Identity = 142/151 (94.04%), Postives = 146/151 (96.69%), Query Frame = 1
Query: 1 VLLGLRMLLFGGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
+LLGLRMLLFGGRNPAPGREL+ GGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLG IHRAVGTSALFGLLIS+PGALAYVATGWGD RLPAGSLG+VSLPGLACIAPMTVLAAPLGARLAHRLSARQLN AFGVFLVLVASRMLYRAL
Sbjct: 123 ILLGLRMLLFGGRNPAPGRELSPGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGHSIHRAVGTSALFGLLISLPGALAYVATGWGDDRLPAGSLGFVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNFAFGVFLVLVASRMLYRAL 273
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A2N5Y5R5_9GAMM (Probable membrane transporter protein n=1 Tax=Kineobactrum sediminis TaxID=1905677 RepID=A0A2N5Y5R5_9GAMM) HSP 1 Score: 213 bits (542), Expect = 6.670e-67 Identity = 116/151 (76.82%), Postives = 129/151 (85.43%), Query Frame = 1
Query: 1 VLLGLRMLLFGGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
VL+ LRMLLFGGR P P R + G LARL PLGIGGLSSMMGIGGGTFSVPVLTLLG IHRAVGTSA FGLLIS+PGA+A+ GWGD RLP GS+G+V+L GLA IAPMT+LAAP GARLAH L+ARQLNLAFG+FL++VA RMLYRAL
Sbjct: 123 VLMALRMLLFGGRAPGPARAMPMGVLARLVPLGIGGLSSMMGIGGGTFSVPVLTLLGQPIHRAVGTSAFFGLLISLPGAIAFGLAGWGDPRLPPGSVGFVNLAGLAFIAPMTMLAAPWGARLAHHLNARQLNLAFGLFLLIVALRMLYRAL 273
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A2D5FFU2_9GAMM (Probable membrane transporter protein n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2D5FFU2_9GAMM) HSP 1 Score: 192 bits (488), Expect = 1.030e-58 Identity = 109/150 (72.67%), Postives = 121/150 (80.67%), Query Frame = 1
Query: 4 LLGLRMLLFGGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
++ LRMLL G A R + G + RLFPLGIGG+SS+MGIGGGT SVP L+LLGL +HRAVGTSALFGLLI++PGALAYV TGWGD RLP GSLG+VSLPGL CIAPMTVL APLG RLAHRLS L L FG FL+LVA RMLYRAL
Sbjct: 124 VMALRMLLPAG-TLALVRAIPPGPVGRLFPLGIGGVSSIMGIGGGTLSVPTLSLLGLSMHRAVGTSALFGLLIALPGALAYVVTGWGDPRLPPGSLGFVSLPGLLCIAPMTVLTAPLGVRLAHRLSPLHLRLFFGGFLLLVALRMLYRAL 272
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: UPI0019D34743 (sulfite exporter TauE/SafE family protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI0019D34743) HSP 1 Score: 171 bits (433), Expect = 2.140e-50 Identity = 93/129 (72.09%), Postives = 107/129 (82.95%), Query Frame = 1
Query: 67 AGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
AG +L P+ IGGLS MMGIGGGT SVP T++G+ +HRAVGTSALFGLLI++PGA+ YV TGWGD RLP G+LGYVSL GL IAPMTVL APLGA+LAH+LS R L LAFGVFL++VA RMLYRAL
Sbjct: 144 AGLAGKLPPVFIGGLSCMMGIGGGTLSVPAQTMMGIPMHRAVGTSALFGLLIALPGAVTYVVTGWGDPRLPVGNLGYVSLLGLCLIAPMTVLTAPLGAKLAHKLSQRHLTLAFGVFLLVVAVRMLYRAL 272
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A5C8ZSM1_9GAMM (Probable membrane transporter protein n=1 Tax=Parahaliea aestuarii TaxID=1852021 RepID=A0A5C8ZSM1_9GAMM) HSP 1 Score: 166 bits (421), Expect = 1.230e-48 Identity = 91/128 (71.09%), Postives = 107/128 (83.59%), Query Frame = 1
Query: 70 GGL-ARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRA 450
GGL ++ PL IGGLS MMGIGGG+ SVP LT++ + +HRAVGTSALFGLLI+VPG L Y+ TGWGD RLP+G+LG+VSL GL IAPMTVL APLGA+LAHRLS RQL+L FG FL+LV+ RMLYRA
Sbjct: 142 GGLPGKIPPLLIGGLSCMMGIGGGSLSVPALTMMSVPVHRAVGTSALFGLLIAVPGTLTYIVTGWGDPRLPSGNLGFVSLLGLVMIAPMTVLTAPLGAKLAHRLSQRQLSLFFGSFLLLVSLRMLYRA 269
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A5C9A5G4_9GAMM (Probable membrane transporter protein n=1 Tax=Parahaliea maris TaxID=2716870 RepID=A0A5C9A5G4_9GAMM) HSP 1 Score: 166 bits (420), Expect = 1.840e-48 Identity = 89/127 (70.08%), Postives = 107/127 (84.25%), Query Frame = 1
Query: 70 GGLA-RLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYR 447
GGLA +L P+ IGGLS MMGIGGG+ +VP LTL+ + +HRAVGTSALFGLLI+VPG + Y+ATGWGD RLP G+LG+VSL GL IAPMTVL APLGA++AHRL+ RQL+L FG FL+LV+ RMLYR
Sbjct: 144 GGLAGKLPPVAIGGLSCMMGIGGGSLTVPALTLMSVPVHRAVGTSALFGLLIAVPGTITYIATGWGDLRLPVGNLGFVSLLGLVFIAPMTVLTAPLGAKIAHRLNQRQLSLVFGSFLLLVSIRMLYR 270
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A7W2TVD0_9GAMM (Probable membrane transporter protein n=1 Tax=Sediminihaliea albiluteola TaxID=2758564 RepID=A0A7W2TVD0_9GAMM) HSP 1 Score: 165 bits (418), Expect = 3.690e-48 Identity = 90/129 (69.77%), Postives = 106/129 (82.17%), Query Frame = 1
Query: 67 AGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
AG L +L + IG LSSM+GIGGGT SVP LT++ +HRAVGTSALFGLLIS+PGALAYV TGW D R+P G+LGYVS+ GLA IAPMTVL APLGA+ +HRLS + L+ AFGVFLVL+A RM+YRAL
Sbjct: 144 AGLLGKLPAVAIGALSSMIGIGGGTLSVPTLTMMSTPMHRAVGTSALFGLLISLPGALAYVLTGWNDPRVPFGNLGYVSVIGLALIAPMTVLTAPLGAKFSHRLSQQHLSFAFGVFLVLIAGRMIYRAL 272
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: UPI000E2FA311 (sulfite exporter TauE/SafE family protein n=1 Tax=Parahaliea mediterranea TaxID=651086 RepID=UPI000E2FA311) HSP 1 Score: 165 bits (418), Expect = 3.790e-48 Identity = 96/154 (62.34%), Postives = 118/154 (76.62%), Query Frame = 1
Query: 1 VLLGLRMLLFGGRNPAPGRELA---AGGL-ARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRA 450
+L+ L+M+L P L+ GGL ++ P+ IGGLS MMGIGGG+ SVP LT++ + +HRAVGTSALFGLLI+VPGAL YV TGWGD RLP+G+LGYVSL GL IAP TVLAAPLGA+LAH+L RQL+L FG FL++V+ RMLYRA
Sbjct: 123 ILVALKMVL-----PTDNLRLSNHVPGGLPGKIPPVLIGGLSCMMGIGGGSLSVPALTMMSVPVHRAVGTSALFGLLIAVPGALTYVITGWGDPRLPSGNLGYVSLLGLCLIAPTTVLAAPLGAKLAHKLDQRQLSLVFGSFLLIVSIRMLYRA 271
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: UPI0016691F81 (sulfite exporter TauE/SafE family protein n=3 Tax=Alteromonadaceae TaxID=72275 RepID=UPI0016691F81) HSP 1 Score: 164 bits (414), Expect = 1.520e-47 Identity = 94/151 (62.25%), Postives = 115/151 (76.16%), Query Frame = 1
Query: 1 VLLGLRMLLFGGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRAL 453
+L+ L+MLL N R++ G A PL IGGLSSMMGIGGGT SVPVLTL+ IHRAVGT+ALFGLLIS+PGA + +GWGD+RLP GSLGY++L G+A IAP+TV+ AP GA+LAHRL R+L++ FG FL+LVA RMLYR L
Sbjct: 123 LLVALKMLL-PLDNLILSRDVPRGLAAPFPPLAIGGLSSMMGIGGGTLSVPVLTLMNQPIHRAVGTAALFGLLISLPGAFGFAYSGWGDSRLPPGSLGYINLIGVALIAPVTVVMAPFGAKLAHRLDKRRLSMLFGFFLLLVAGRMLYRTL 272
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Match: A0A520WXL8_9GAMM (Probable membrane transporter protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A520WXL8_9GAMM) HSP 1 Score: 162 bits (409), Expect = 7.710e-47 Identity = 93/151 (61.59%), Postives = 110/151 (72.85%), Query Frame = 1
Query: 1 VLLGLRMLLF-GGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLGLGIHRAVGTSALFGLLISVPGALAYVATGWGDARLPAGSLGYVSLPGLACIAPMTVLAAPLGARLAHRLSARQLNLAFGVFLVLVASRMLYRA 450
+L+ ++MLLF RN + G L + P+ IG SSMMGIGGGTFSV LTL IHRAVGT+ALFGL+IS+PG L +VA GW D RLP GSLGYVSL G ACIAP TVLAAPLGAR+AH SAR+LN+ FG FL+L + R+ YRA
Sbjct: 120 LLVAIKMLLFPDSRNLTD--AVPRGPLVTVIPVSIGCFSSMMGIGGGTFSVMTLTLFNEPIHRAVGTAALFGLVISLPGMLGFVAAGWADPRLPPGSLGYVSLVGFACIAPATVLAAPLGARIAHGFSARRLNMLFGAFLILASLRLFYRA 268 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100646.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100646.2.1 >prot_L-digitata_M_contig100646.2.1 ID=prot_L-digitata_M_contig100646.2.1|Name=mRNA_L-digitata_M_contig100646.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=146bp MLLFGGRNPAPGRELAAGGLARLFPLGIGGLSSMMGIGGGTFSVPVLTLLback to top mRNA from alignment at L-digitata_M_contig100646:482..937- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100646.2.1 ID=mRNA_L-digitata_M_contig100646.2.1|Name=mRNA_L-digitata_M_contig100646.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=456bp|location=Sequence derived from alignment at L-digitata_M_contig100646:482..937- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100646:482..937- >mRNA_L-digitata_M_contig100646.2.1 ID=mRNA_L-digitata_M_contig100646.2.1|Name=mRNA_L-digitata_M_contig100646.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=438bp|location=Sequence derived from alignment at L-digitata_M_contig100646:482..937- (Laminaria digitata LdigPH10_18mv male)back to top |