mRNA_L-digitata_M_contig100578.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A2G2D8X4_9SPHN (Oxidoreductase n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D8X4_9SPHN) HSP 1 Score: 256 bits (653), Expect = 4.550e-83 Identity = 123/141 (87.23%), Postives = 135/141 (95.74%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
MVDAIRLRDDE+HEEPAVSL+SFL+QSNATAVRIEAGEDARQLLP+LDRLSL+E+ F VFGDGRGYSSAQILRE+GYTGELRASGDVLVDQ+AY+RRCGFDAFAPDSPINPK M EAL+RY+HVYQAT+D RTPIW LRHG
Sbjct: 1 MVDAIRLRDDELHEEPAVSLESFLEQSNATAVRIEAGEDARQLLPYLDRLSLVEVSFPVFGDGRGYSSAQILRESGYTGELRASGDVLVDQVAYMRRCGFDAFAPDSPINPKHMEEALTRYEHVYQATTDQRTPIWRLRHG 141
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A127MF88_9SPHN (Oxidoreductase n=5 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A127MF88_9SPHN) HSP 1 Score: 254 bits (650), Expect = 1.300e-82 Identity = 123/141 (87.23%), Postives = 133/141 (94.33%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
M D IRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDF FGDGRGYS+AQILRE+GYTGELRASGDVL+DQ++++RRCGFDAFAPDSPINP+LM EA+ RY+HVYQATSD RTPIW LRHG
Sbjct: 1 MGDTIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFPAFGDGRGYSAAQILRESGYTGELRASGDVLLDQVSHMRRCGFDAFAPDSPINPRLMEEAIQRYEHVYQATSDQRTPIWRLRHG 141
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A1B6ZDZ5_9SPHN (Oxidoreductase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6ZDZ5_9SPHN) HSP 1 Score: 240 bits (613), Expect = 5.280e-77 Identity = 113/140 (80.71%), Postives = 130/140 (92.86%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRH 760
MV+ IR+R+DE HEEPAVSLD+FLDQ+NATAVRIEAGEDARQL+PFLDRL+LIE+DF VFGDGRGYS+AQILRE GYTGELRASGDVLVDQ+AYL+RCGFDAFAPD+PINP++MA+AL RY+ VYQ T+D R PIW LRH
Sbjct: 1 MVEVIRMREDEPHEEPAVSLDAFLDQTNATAVRIEAGEDARQLIPFLDRLALIEVDFPVFGDGRGYSAAQILREEGYTGELRASGDVLVDQLAYLKRCGFDAFAPDAPINPQVMAQALDRYEDVYQGTTDSRAPIWKLRH 140
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A1N6EZJ7_9SPHN (Uncharacterized conserved protein, DUF934 family n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6EZJ7_9SPHN) HSP 1 Score: 236 bits (603), Expect = 1.670e-75 Identity = 115/141 (81.56%), Postives = 129/141 (91.49%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
MV+AIR RDD +HEEPAVSLD+FLDQSNATAVRIEAGEDAR LLP LDR+SL+EIDF VFGDGRGYS+AQILREAGY GELRASGDVLVDQ+AY+RRCGFD+F PD+PI+PK+M EAL+RY+HVYQ TSD RTPIW RHG
Sbjct: 1 MVEAIRFRDD-IHEEPAVSLDAFLDQSNATAVRIEAGEDARLLLPLLDRISLVEIDFPVFGDGRGYSAAQILREAGYEGELRASGDVLVDQLAYMRRCGFDSFIPDAPIDPKVMEEALARYEHVYQGTSDQRTPIWRHRHG 140
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A3B0SMD0_9ZZZZ (Oxidoreductase probably involved in sulfite reduction n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SMD0_9ZZZZ) HSP 1 Score: 236 bits (601), Expect = 3.480e-75 Identity = 112/140 (80.00%), Postives = 125/140 (89.29%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRH 760
MV+ IR RDDE HEEPAVSLD+FLDQSNATAVR+EAGED R LLP LDR+SL+EIDF VFGDGRGYS+AQILREAGYTGELRASGDVLVDQ+AYLRRCGFDA PD PI+P++M +A+ RY HVYQ TSDGR+PIW LRH
Sbjct: 1 MVEVIRFRDDEAHEEPAVSLDAFLDQSNATAVRVEAGEDVRLLLPLLDRISLVEIDFPVFGDGRGYSAAQILREAGYTGELRASGDVLVDQVAYLRRCGFDALVPDCPIDPQVMDKAMRRYAHVYQGTSDGRSPIWRLRH 140
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: UPI000D689F0B (DUF934 domain-containing protein n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI000D689F0B) HSP 1 Score: 233 bits (595), Expect = 2.820e-74 Identity = 113/141 (80.14%), Postives = 127/141 (90.07%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
MV+AIR RDDEVHEEPAVSLD+FLDQSNATAVRIEAGEDAR LLP LDRL+LIE+DF VFGDGRGYS+AQILREAGY GELRASGDVLVDQIAY+RRCGFDAFAPD+PI+ ++M +AL Y+ VYQ+T+D R PIW RHG
Sbjct: 1 MVEAIRFRDDEVHEEPAVSLDAFLDQSNATAVRIEAGEDARLLLPLLDRLALIEVDFPVFGDGRGYSAAQILREAGYKGELRASGDVLVDQIAYMRRCGFDAFAPDAPIDARVMDKALELYEEVYQSTTDSRAPIWKRRHG 141
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A6H2DJI6_9SPHN (DUF934 domain-containing protein n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DJI6_9SPHN) HSP 1 Score: 232 bits (592), Expect = 8.030e-74 Identity = 111/141 (78.72%), Postives = 125/141 (88.65%), Query Frame = 2
Query: 341 MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
M D IR R+DE HEEPAVSLD+FLDQSNATAVR+EAGEDAR LLPFLDRL+LIE+DF FGDGRGYS+AQILRE GY GELRASGDVLVDQIAY++RCGFDAFAPD+PIN ++M +L+ YD VYQ TSDGRTPIW+ RHG
Sbjct: 1 MTDPIRFREDEAHEEPAVSLDAFLDQSNATAVRVEAGEDARALLPFLDRLALIEVDFPAFGDGRGYSAAQILRENGYKGELRASGDVLVDQIAYMKRCGFDAFAPDAPINRQVMEASLALYDDVYQGTSDGRTPIWAKRHG 141
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A160TKJ3_9ZZZZ (Oxidoreductase probably involved in sulfite reduction n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A160TKJ3_9ZZZZ) HSP 1 Score: 222 bits (566), Expect = 2.210e-69 Identity = 111/171 (64.91%), Postives = 133/171 (77.78%), Query Frame = 2
Query: 251 PISISRSARTGNASSIPIAGSAWRNSRRPYMVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
PI SR ARTGNASS PIA SA SRR M D +R RDD H+EPAV+LDSFL Q+NATAVRIE+G+DAR L+P L ++ LIE+ F F DGRGYSSA+ILREAGY GELRA+GDVLVDQI +RRCGFD+FAP + I+ + +L+RY+HVYQA +DG P+W LRHG
Sbjct: 6 PIVTSRCARTGNASSTPIAESASIRSRRRSMGDLLRFRDDAPHDEPAVTLDSFLGQTNATAVRIESGDDARALIPHLGQIGLIEVSFPAFRDGRGYSSARILREAGYEGELRAAGDVLVDQIPLMRRCGFDSFAPQAEIDAATLHASLTRYEHVYQAAADGGVPVWKLRHG 176
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A1M3PLS8_9SPHN (Oxidoreductase n=1 Tax=Sphingobium sp. 66-54 TaxID=1895845 RepID=A0A1M3PLS8_9SPHN) HSP 1 Score: 218 bits (554), Expect = 4.700e-68 Identity = 102/139 (73.38%), Postives = 121/139 (87.05%), Query Frame = 2
Query: 347 DAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
D IR RDDE HEEPAVSLD+FLDQSNATAVR+EAGEDAR+L+PFLDRL+LIE+DF F DGRGYSSA+ILREAGY GELRASGDVLVDQ+ ++RRCGFD+FAPD+PI+P ++ AL+RY +VYQ +D P+W LRHG
Sbjct: 4 DIIRFRDDEPHEEPAVSLDAFLDQSNATAVRVEAGEDARRLIPFLDRLALIEVDFPRFRDGRGYSSARILREAGYKGELRASGDVLVDQMLFMRRCGFDSFAPDAPIDPDVLDAALNRYPYVYQTAADAAVPVWKLRHG 142
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Match: A0A6G6Y6H6_9SPHN (DUF934 domain-containing protein n=1 Tax=Sphingosinithalassobacter tenebrarum TaxID=2711215 RepID=A0A6G6Y6H6_9SPHN) HSP 1 Score: 214 bits (545), Expect = 1.450e-66 Identity = 98/139 (70.50%), Postives = 117/139 (84.17%), Query Frame = 2
Query: 347 DAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLSLIEIDFTVFGDGRGYSSAQILREAGYTGELRASGDVLVDQIAYLRRCGFDAFAPDSPINPKLMAEALSRYDHVYQATSDGRTPIWSLRHG 763
+A+R R+DE HEEPAV+LD+FLDQSNATAVR+E GEDAR LLP+LDRL L+E+ F F DGRGYS+A+ILRE GYTGELRA GDVLVDQI Y+RRCGFD+FAPD P++ ++ AL RYDHVYQ +DGR P+W LRHG
Sbjct: 13 NALRFRNDEPHEEPAVTLDAFLDQSNATAVRLETGEDARALLPYLDRLQLVEVSFPKFRDGRGYSAARILREEGYTGELRAQGDVLVDQIPYMRRCGFDSFAPDRPVDEAVLTRALDRYDHVYQGAADGRMPVWELRHG 151 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100578.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100578.1.1 >prot_L-digitata_M_contig100578.1.1 ID=prot_L-digitata_M_contig100578.1.1|Name=mRNA_L-digitata_M_contig100578.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=142bp MVDAIRLRDDEVHEEPAVSLDSFLDQSNATAVRIEAGEDARQLLPFLDRLback to top mRNA from alignment at L-digitata_M_contig100578:3..937- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100578.1.1 ID=mRNA_L-digitata_M_contig100578.1.1|Name=mRNA_L-digitata_M_contig100578.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=935bp|location=Sequence derived from alignment at L-digitata_M_contig100578:3..937- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100578:3..937- >mRNA_L-digitata_M_contig100578.1.1 ID=mRNA_L-digitata_M_contig100578.1.1|Name=mRNA_L-digitata_M_contig100578.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=426bp|location=Sequence derived from alignment at L-digitata_M_contig100578:3..937- (Laminaria digitata LdigPH10_18mv male)back to top |