mRNA_L-digitata_M_contig100577.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
|
Overview
Homology
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A520NN62_9PROT (DNA gyrase subunit A n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NN62_9PROT) HSP 1 Score: 540 bits (1391), Expect = 1.050e-183 Identity = 277/313 (88.50%), Postives = 299/313 (95.53%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPAKFPN+LVNG GGIAVGMATNIPPHNLGEVIDACCA++DN D++I ELMEVIPGPDFPTGGII+GRQG TSAF TGRG+VVMRGR ++EEIRKDREAII+SEIPYQVNK+RMIERIAEMVRDKKIEG+ DLRDESDRDGVRVVIEIKRDSL EVVLNQLYRYSPLQTSFGVNTLALNNGKP+LLNLK+ILEAF+DFRE+VIRRRTE+DL+KARDRAHVLVGLAIAVANID+VIALIRAAKDPVEAR GLMARDWAA EV SLI LIDDPNH VV+GRYRLSEAQARAILELRLQRLTGLEQ KIA+EL+GL
Sbjct: 166 LPAKFPNLLVNGGGGIAVGMATNIPPHNLGEVIDACCALIDNADLSIGELMEVIPGPDFPTGGIIVGRQGSTSAFETGRGSVVMRGRVSIEEIRKDREAIIVSEIPYQVNKARMIERIAEMVRDKKIEGVGDLRDESDRDGVRVVIEIKRDSLAEVVLNQLYRYSPLQTSFGVNTLALNNGKPQLLNLKQILEAFVDFREEVIRRRTEYDLSKARDRAHVLVGLAIAVANIDEVIALIRAAKDPVEARNGLMARDWAAEEVASLIALIDDPNHMVVEGRYRLSEAQARAILELRLQRLTGLEQEKIADELSGL 478
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A2S6QBW2_9PROT (DNA gyrase subunit A n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6QBW2_9PROT) HSP 1 Score: 527 bits (1358), Expect = 1.010e-178 Identity = 272/313 (86.90%), Postives = 295/313 (94.25%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPAKFPN+LVNG GGIAVGMATNIPPHNLGEVIDACCA++DNP++ I ELM+VIPGPDFPTGGII+GRQGLT+AF TGRG+VVMRGR ++EEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGI DLRDESDRDGVRVVIEIKRD+L +VVLNQLYRYSPLQTSFGVNTLALN GKPELLNLK+ILEAF+ FRE+VIRRRTEFDL+KARDRAHVLVGLAIAVANID+ IALIR AKDPVEAR LM RDW A++V SLIELIDDP+H VVDGRYRLSEAQARAILELRLQRLTGLE+ KIAEEL+GL
Sbjct: 166 LPAKFPNLLVNGGGGIAVGMATNIPPHNLGEVIDACCALIDNPNLPIAELMQVIPGPDFPTGGIIVGRQGLTNAFETGRGSVVMRGRVSIEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGIGDLRDESDRDGVRVVIEIKRDALADVVLNQLYRYSPLQTSFGVNTLALNEGKPELLNLKQILEAFVHFREEVIRRRTEFDLSKARDRAHVLVGLAIAVANIDEAIALIRGAKDPVEARTELMNRDWTATDVASLIELIDDPDHVVVDGRYRLSEAQARAILELRLQRLTGLERDKIAEELSGL 478
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: UPI00115E4B20 (DNA gyrase subunit A n=1 Tax=Telmatospirillum sp. J64-1 TaxID=2502183 RepID=UPI00115E4B20) HSP 1 Score: 473 bits (1218), Expect = 7.140e-158 Identity = 239/313 (76.36%), Postives = 279/313 (89.14%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPA+FPN+LVNGAGGIAVGMATNIPPHNLGEVIDACCA +DNP+VT +ELME++P PDFPTGGII+GR G SA+ TGRG++V+RGR +EEIRKDREAI+++EIPYQVNK+RMIE+IAE+VRDK+IEGISDLRDESDRDGVRVVIE+KRD+ +VVLNQLYR++PLQTSFGVN LALN GKPE++ L+ I+ AF++FRE+VI RRT F+L KARDRAHVLVGLAIAVAN+D VI LIR A DPV ARE LMARDW AS+VE LI LID+P VVDG+YRLSEAQARAIL+LRL RLTGLE+ KIAEEL G+
Sbjct: 164 LPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACCAYIDNPEVTAEELMELVPAPDFPTGGIIVGRVGARSAYTTGRGSIVIRGRCHIEEIRKDREAIVVTEIPYQVNKARMIEQIAELVRDKRIEGISDLRDESDRDGVRVVIEVKRDAQADVVLNQLYRFTPLQTSFGVNMLALNGGKPEMMALRDIIVAFVNFREEVITRRTIFELEKARDRAHVLVGLAIAVANLDPVIKLIRQAPDPVTAREQLMARDWDASDVEPLIRLIDEPGRGVVDGKYRLSEAQARAILDLRLHRLTGLERGKIAEELTGI 476
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A2E6GND5_9PROT (DNA gyrase subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E6GND5_9PROT) HSP 1 Score: 469 bits (1208), Expect = 2.910e-156 Identity = 237/313 (75.72%), Postives = 277/313 (88.50%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPA+FPN+LVNGAGGIAVGMATNIP HNLGEVID CCA+LDNPD++I+EL+E+IPGPDFPTGG+I+GR G+ A+HTGRG+VV+RGR VEEIRKDREAII++EIPYQVNK+RMIERIAEMVRDK+IEGISD+RDESDRDGVRVVIE+KRD + EVVLNQL+RY+PLQTSFG+N LALN G+P+ + ++ +L AFI FRE+VI RRT ++L KARDRAHVLVGLAIAVANID VI LIR+A DPV AREGLM W A +V SLIELID+P VVDG+Y+LSE QARAIL+LRLQRLTGLE+ KIAEEL L
Sbjct: 163 LPARFPNLLVNGAGGIAVGMATNIPTHNLGEVIDGCCALLDNPDISINELIEIIPGPDFPTGGLIMGRNGINQAYHTGRGSVVIRGRTHVEEIRKDREAIIVTEIPYQVNKARMIERIAEMVRDKRIEGISDIRDESDRDGVRVVIEVKRDHMAEVVLNQLFRYTPLQTSFGINMLALNGGRPQQMTVRDVLVAFIAFREEVITRRTIYELGKARDRAHVLVGLAIAVANIDKVIELIRSAPDPVTAREGLMKDPWPAGDVASLIELIDEPGRGVVDGKYQLSETQARAILDLRLQRLTGLERGKIAEELEEL 475
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A6N7FCP9_9PROT (DNA gyrase subunit A n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCP9_9PROT) HSP 1 Score: 468 bits (1203), Expect = 1.360e-155 Identity = 235/313 (75.08%), Postives = 278/313 (88.82%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPA+FPN+LVNGAGGIAVGMATNIPPHNLGEVIDACCA+LDNP+++I EL++ +PGPDFPTGGII+GR G+ A+HTGRG+VV+RGR EE+RKDREAII++E+PYQVNK+RMIERIAEMVR+K+IEGISD+RDESDR+GVRVVIE++RD++ E+VLNQL+RY+PLQTSFGVN LALN G+PE++NL ++L+AFI FRE+VI RRT F+L KARDRAHVL GLAIAVANID VI LIRAAKDPVEAR LM W A +V LI LID+P H VVDG+Y LSE QARAIL+LRLQRLTGLE+ KIAEEL GL
Sbjct: 163 LPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACCAMLDNPNISIAELIQHLPGPDFPTGGIILGRTGIHQAYHTGRGSVVIRGRTYFEEVRKDREAIIVTEVPYQVNKARMIERIAEMVREKRIEGISDIRDESDRNGVRVVIELRRDAMAEIVLNQLFRYTPLQTSFGVNMLALNGGRPEMMNLAQVLQAFIAFREEVITRRTIFELGKARDRAHVLAGLAIAVANIDAVIELIRAAKDPVEARTQLMEAAWPAGDVAPLIALIDEPGHRVVDGKYTLSEIQARAILDLRLQRLTGLERGKIAEELEGL 475
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: UPI0019959352 (DNA topoisomerase (ATP-hydrolyzing) subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019959352) HSP 1 Score: 455 bits (1170), Expect = 2.740e-155 Identity = 226/310 (72.90%), Postives = 274/310 (88.39%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEEL 930
LPA+FPN+LVNGAGGIAVGMATNIPPHNLGEVIDACCA +++P++T +++ME++PGPDFPTGG I+GR G+ +A TGRG+++MRGR VEEIRKDREAII++E+PYQVNK+RMIE+IAE+VRDKKIEGISDLRDESDRDGVRVVIEIKRD++ +VVL QLY+++PLQTSFGVN+LALN GKPE++ L+ I+ AFI FRE+VI RRT F+L KARDRAHVLVGL+IAVANID++IA+IRAA DP ARE LMARDW A +VE LI LID+P +VDG Y LSE QA+AIL+LRL RLTGLE+ KI +EL
Sbjct: 163 LPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACCAYIEDPEITPEQIMEIVPGPDFPTGGTILGRAGIRAAHLTGRGSIIMRGRCHVEEIRKDREAIIVTEVPYQVNKARMIEQIAELVRDKKIEGISDLRDESDRDGVRVVIEIKRDAIADVVLAQLYKFTPLQTSFGVNSLALNGGKPEMMTLREIIVAFIAFREEVITRRTIFELGKARDRAHVLVGLSIAVANIDEMIAMIRAAPDPATAREQLMARDWPAMDVEPLIRLIDEPGRGIVDGNYMLSEVQAKAILDLRLHRLTGLERDKIGDEL 472
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A5C7NFE3_9PROT (DNA gyrase subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A5C7NFE3_9PROT) HSP 1 Score: 464 bits (1195), Expect = 2.990e-154 Identity = 236/314 (75.16%), Postives = 277/314 (88.22%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVD-GRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPA+FPN+LVNGAGGIAVGMATNIP HNL EVIDACCA +DNP +TID++M+ +PGPDFPTGG+I+GR G+ AFHTGRG+VVMRGR VEEIRKDR+AIII+EIPYQVNK+RMIER+AE+VR+K IEGI+DLRDESDRDGVRVV+E+KRD++ EVVLNQL+R++PLQTSFGVN LALN G+P+L+NLK I+ AFI FRE+VI RRT F+LN+ R+RAHVLVGLAIAVANID++IALIR A DPV ARE LMARDW A +V LI LIDDP H + + G YRLSEAQARAILELRLQRLTGLE+ KIA+EL L
Sbjct: 163 LPARFPNLLVNGAGGIAVGMATNIPTHNLSEVIDACCAYIDNPGITIDQIMQHVPGPDFPTGGLILGRNGIREAFHTGRGSVVMRGRTHVEEIRKDRDAIIITEIPYQVNKARMIERMAEVVREKLIEGIADLRDESDRDGVRVVVELKRDAMAEVVLNQLFRFTPLQTSFGVNMLALNGGRPQLMNLKEIIAAFIHFREEVITRRTVFELNQTRERAHVLVGLAIAVANIDEIIALIRRAPDPVVAREQLMARDWPAEDVAPLIRLIDDPTHTISENGTYRLSEAQARAILELRLQRLTGLERDKIADELKEL 476
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A2E5V7A5_9PROT (DNA gyrase subunit A n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E5V7A5_9PROT) HSP 1 Score: 462 bits (1189), Expect = 8.590e-154 Identity = 232/313 (74.12%), Postives = 274/313 (87.54%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPAK+PN+LVNGAGGIAVGMATNIP HNLGEVID CCA+LDNP++TI EL+++IPGPDFPTGG+I+GR G+ A++TGRG+VV+RGR +EE+RKDREAII++E+PYQ+NK+RMIERIAEMVRDK+IEGISD+RDESDRDGVRVVIEIKRD + EVVLNQL++Y+PLQTSFGVN LALN G+PEL+ ++ +L AFI FRE+VI RRT ++L KARDRAHVLVGLAIAVANID +I LIR A DPV AREGLM W A EV SLIELID+P VV+G Y+LSE QARAIL+LRLQRLTGLE+ KIA EL L
Sbjct: 163 LPAKYPNLLVNGAGGIAVGMATNIPTHNLGEVIDGCCALLDNPNLTIGELLQIIPGPDFPTGGLIMGRXGINQAYNTGRGSVVIRGRTHIEEVRKDREAIIVTEVPYQINKARMIERIAEMVRDKRIEGISDIRDESDRDGVRVVIEIKRDHMSEVVLNQLFKYTPLQTSFGVNLLALNGGRPELMTVRDVLSAFISFREEVITRRTVYELGKARDRAHVLVGLAIAVANIDKIIELIRGAPDPVTAREGLMKNTWPAGEVVSLIELIDEPGRGVVEGSYQLSEVQARAILDLRLQRLTGLERDKIAGELEDL 475
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: A0A2E3K5V3_9PROT (DNA gyrase subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K5V3_9PROT) HSP 1 Score: 461 bits (1185), Expect = 3.500e-153 Identity = 228/313 (72.84%), Postives = 275/313 (87.86%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEELNGL 939
LPA+FPN+LVNGAGGIAVGMATNIP HNL EV+DA CA+LDNPD+++DEL+ +PGPDFPTGG+I+G+ G+ A+HTGRG+V+MRGR +EEIRKDREAI+++EIPYQVNK+RMIERIAE+VR+K+IEGISD+RDESDRDGVRVV+E+KRDS ++VLNQLYRYSPLQTSFG+N LALN G+PELLNLK +L+AFI FRE+VI RRT F+L KARDRAHVL GLA AV NI++VI LIR A DPV+AR+ LM W A+EV SLI LIDDPNH V+DG+Y LSEAQARAILELRLQRLT LE+ K++ +L+ L
Sbjct: 143 LPARFPNLLVNGAGGIAVGMATNIPTHNLDEVVDATCALLDNPDISVDELITFLPGPDFPTGGLIMGKSGIIQAYHTGRGSVIMRGRTHIEEIRKDREAIVVTEIPYQVNKARMIERIAELVREKRIEGISDIRDESDRDGVRVVVEVKRDSQADIVLNQLYRYSPLQTSFGINMLALNAGRPELLNLKNVLQAFIKFREEVITRRTIFELRKARDRAHVLAGLATAVVNIENVIQLIRNAPDPVKARKSLMEISWPANEVASLISLIDDPNHEVIDGKYTLSEAQARAILELRLQRLTSLEREKVSSDLSFL 455
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Match: UPI0019C8BCB6 (DNA gyrase subunit A n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=UPI0019C8BCB6) HSP 1 Score: 459 bits (1181), Expect = 9.120e-153 Identity = 227/310 (73.23%), Postives = 276/310 (89.03%), Query Frame = 1
Query: 1 LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELMEVIPGPDFPTGGIIIGRQGLTSAFHTGRGAVVMRGRATVEEIRKDREAIIISEIPYQVNKSRMIERIAEMVRDKKIEGISDLRDESDRDGVRVVIEIKRDSLGEVVLNQLYRYSPLQTSFGVNTLALNNGKPELLNLKRILEAFIDFREDVIRRRTEFDLNKARDRAHVLVGLAIAVANIDDVIALIRAAKDPVEAREGLMARDWAASEVESLIELIDDPNHAVVDGRYRLSEAQARAILELRLQRLTGLEQAKIAEEL 930
LPA+FPN+LVNGAGGIAVGMATNIPPHNLGEVIDACCA +D+P++T +++ME++PGPDFPTGG I+GR G+ +A+ TGRG+++MRGR VEEIRKDREAII++E+PYQVNK+RMIE+IAE+VRDKKIEGISDLRDESDRDGVRVVIEIKRD++ +VVL QLY+++PLQTSFGVN+LALN GKPE++ L+ I+ AFI FRE+VI RRT ++L KARDRAHVLVGL+IAVANID++IA+IRAA DP ARE LMARDW A EVE LI LID+P +VDG+Y LSE QA+AIL+LRL RLTGLE+ KI +EL
Sbjct: 163 LPARFPNLLVNGAGGIAVGMATNIPPHNLGEVIDACCAYIDDPEITPEQMMEIVPGPDFPTGGTILGRAGIRAAYMTGRGSIIMRGRCHVEEIRKDREAIIVTEVPYQVNKARMIEQIAELVRDKKIEGISDLRDESDRDGVRVVIEIKRDAIADVVLAQLYKFTPLQTSFGVNSLALNGGKPEMMTLREIIVAFIAFREEVITRRTIYELGKARDRAHVLVGLSIAVANIDEMIAMIRAAPDPATAREQLMARDWPAMEVEPLIRLIDEPGRGIVDGKYMLSEVQAKAILDLRLHRLTGLERDKIGDEL 472 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100577.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100577.1.1 >prot_L-digitata_M_contig100577.1.1 ID=prot_L-digitata_M_contig100577.1.1|Name=mRNA_L-digitata_M_contig100577.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=313bp LPAKFPNILVNGAGGIAVGMATNIPPHNLGEVIDACCAVLDNPDVTIDELback to top mRNA from alignment at L-digitata_M_contig100577:1..939+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100577.1.1 ID=mRNA_L-digitata_M_contig100577.1.1|Name=mRNA_L-digitata_M_contig100577.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=939bp|location=Sequence derived from alignment at L-digitata_M_contig100577:1..939+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100577:1..939+ >mRNA_L-digitata_M_contig100577.1.1 ID=mRNA_L-digitata_M_contig100577.1.1|Name=mRNA_L-digitata_M_contig100577.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=939bp|location=Sequence derived from alignment at L-digitata_M_contig100577:1..939+ (Laminaria digitata LdigPH10_18mv male)back to top |