mRNA_L-digitata_M_contig100573.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100573.1.1
Unique NamemRNA_L-digitata_M_contig100573.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2M7LE49_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LE49_9SPHN)

HSP 1 Score: 522 bits (1345), Expect = 4.770e-183
Identity = 273/313 (87.22%), Postives = 288/313 (92.01%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RP RRGGAMR RRWG+LKYG ESAVT  M RLPELEARAGQAFANMGIGFSDIRA FT +L  DM+GHLIGANRG WRNNPINRSMG +  P ETRGYV ISA+QADGQWVSIAS VR RTPLM+RTLLFQTITIYLLML+PLILLGRYISRPLKSLTARAH FQPG++E L EQGPPDTRELIRAFNAMS RVS MINEKDVMLGAIGHDLRTPLAALRVRVENVED+ ERERM+AGIEDIDHTLDDILSLARLGRS EQADPVDIRSLIETIVDEF+DLGH+VHYQRG+KQSALIRETL+RRALRNLIGNA
Sbjct:   77 RPGRRGGAMRARRWGQLKYGSESAVTDGMNRLPELEARAGQAFANMGIGFSDIRATFTRNLTADMSGHLIGANRGEWRNNPINRSMGDKRMPPETRGYVIISAQQADGQWVSIASVVRERTPLMIRTLLFQTITIYLLMLIPLILLGRYISRPLKSLTARAHNFQPGDSEDLAEQGPPDTRELIRAFNAMSGRVSSMINEKDVMLGAIGHDLRTPLAALRVRVENVEDDIERERMIAGIEDIDHTLDDILSLARLGRSAEQADPVDIRSLIETIVDEFTDLGHEVHYQRGDKQSALIRETLVRRALRNLIGNA 389          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2G2D8P9_9SPHN (Histidine kinase n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D8P9_9SPHN)

HSP 1 Score: 498 bits (1282), Expect = 1.100e-173
Identity = 260/313 (83.07%), Postives = 278/313 (88.82%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            R +RRGG MR +RWGRLKY P+SAVT  M+RLPELEARAGQAFANMG GFSDIR  F  D+  DM GH+IGANR GWRNNPINRSMG R  P E  G+V ISARQADGQWVSIAS VR RTPL+VRTLLFQTITIYLLML+PLILLGRYISRPLKSLTARA  FQPGETE LPEQGPPDTRELIRAFN MS RV+ M+NEKDVMLGAIGHDLRTPLAALRVRVE+VED+ ERERM+AGIEDIDH LDDILSLARLGRS EQAD VDIRSLIETIVDEF+DLGH+V YQRGEKQSA+IRETL+RRALRNLIGNA
Sbjct:   63 RSMRRGGDMRAKRWGRLKYSPQSAVTDDMQRLPELEARAGQAFANMGFGFSDIRVTFIDDMTSDMNGHMIGANRRGWRNNPINRSMGDRRTPPEITGFVIISARQADGQWVSIASAVRQRTPLLVRTLLFQTITIYLLMLIPLILLGRYISRPLKSLTARAQGFQPGETEELPEQGPPDTRELIRAFNVMSGRVNAMLNEKDVMLGAIGHDLRTPLAALRVRVESVEDDGERERMIAGIEDIDHMLDDILSLARLGRSGEQADRVDIRSLIETIVDEFTDLGHEVRYQRGEKQSAVIRETLVRRALRNLIGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A127MF07_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MF07_9SPHN)

HSP 1 Score: 478 bits (1230), Expect = 8.700e-166
Identity = 251/313 (80.19%), Postives = 279/313 (89.14%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RP RR G MR RRWG+LKY  ESAV+  MRRLPELEARAGQAFANMGI FSDIRA    +L  DM+GHLIGANR  WR+NPINRSMGG  +P++TRG+V ISA+QADGQWVSIAS VR RTPL+VRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTA+A +FQPGE+  L EQGPPDTRELIRAFN MS RV+ MI+EKDVMLGAIGHDLRTPLAALRVRVENVED+ +RE+M+AGIEDIDHTLDDILSLARLGRS+E +DPVDIRSLIETIVDEF+DLG++V YQRG+KQ A +RETL+RRALRNLIGNA
Sbjct:   63 RPARRNGDMRARRWGQLKYSDESAVSDDMRRLPELEARAGQAFANMGISFSDIRATSIRELTGDMSGHLIGANRREWRDNPINRSMGGNRSPSQTRGFVIISAQQADGQWVSIASVVRERTPLLVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTAKAQSFQPGESGELTEQGPPDTRELIRAFNDMSRRVNGMIDEKDVMLGAIGHDLRTPLAALRVRVENVEDDDDREKMIAGIEDIDHTLDDILSLARLGRSREHSDPVDIRSLIETIVDEFTDLGNEVRYQRGDKQIAPVRETLVRRALRNLIGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2D3RG52_9SPHN (Histidine kinase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RG52_9SPHN)

HSP 1 Score: 461 bits (1186), Expect = 4.170e-159
Identity = 242/313 (77.32%), Postives = 269/313 (85.94%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RPV R   MRPRRWG+L+Y  ES VT  MRRLPELEARAGQAFANMGIGF+DIRA    DL  DMTGH+IG  R   R NPINRSMGG P  +ET+G++ ISA+Q DGQWVSIAS VR R+PL+VRTL+FQT+TIYLLML+PLILLGRYISRPLKSLTA A +F+PG TE L EQGPPDTRELIRAFN MS RV+RMI EKDVMLGAIGHDLRTPLAALRVRVENVEDE ERERMVAGIE++++ L+DILSLARLGRS EQ+DPVDIRSLIET+VDEFSDLG  V YQRGEKQ A +RETL+RRALRNL+GNA
Sbjct:   63 RPVSRRDPMRPRRWGQLRYSAESPVTDDMRRLPELEARAGQAFANMGIGFADIRATLRGDLTSDMTGHVIGTGRNERRKNPINRSMGGGPETSETKGFIIISAQQDDGQWVSIASAVRERSPLLVRTLIFQTVTIYLLMLIPLILLGRYISRPLKSLTATAQSFRPGTTEALEEQGPPDTRELIRAFNDMSGRVTRMIEEKDVMLGAIGHDLRTPLAALRVRVENVEDEVERERMVAGIEEMNNMLEDILSLARLGRSTEQSDPVDIRSLIETVVDEFSDLGRDVRYQRGEKQIAAVRETLVRRALRNLVGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: UPI0015939BC6 (HAMP domain-containing histidine kinase n=2 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI0015939BC6)

HSP 1 Score: 458 bits (1178), Expect = 6.600e-158
Identity = 236/308 (76.62%), Postives = 269/308 (87.34%), Query Frame = 1
Query:   16 GGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            GGA   RR  RLKYGPE+AVT  M+RLPELEARAGQAF+NMGIGFSDIRAA    L PDMTGH+IG+NRG WR+NPINRSMG R  P ET+G+V +SAR+ DGQW+S+AS VR R P++VRTLLFQTI  YLLML+PL+LLGRYISRPLK+LTA A +FQPG+TE L EQGPPDTRELIRAFN MS RVS M+NEK+VMLGAIGHDLRTPLAALRVR+ENV+D+ ERE+MV GIED+D  LDDILSLARLGRS EQ++PVDIRS+IET+VDEF+DLGHQV YQRGEKQ A +RETLIRRALRNLIGN+
Sbjct:   68 GGANGGRRGTRLKYGPETAVTEDMKRLPELEARAGQAFSNMGIGFSDIRAAEVRRLTPDMTGHVIGSNRGKWRDNPINRSMGSRATPLETKGFVIVSARRDDGQWISVASAVRERNPMLVRTLLFQTIITYLLMLIPLVLLGRYISRPLKTLTATARSFQPGKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNS 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A653JGU9_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JGU9_9SPHN)

HSP 1 Score: 458 bits (1178), Expect = 6.830e-158
Identity = 239/313 (76.36%), Postives = 270/313 (86.26%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RP +R  + R RRWG+L+Y P+S VT  MRRLPELEARAGQA ANMGIGF++IRA   TDL  DMTGH++G+NRG WRN+PINRSMGG     ET+G+V IS +Q  GQWVSIAS VR R+PL+VRTLL QTITIYLLML+PLILLGRYISRPLKSLTAR  +FQPG TE L EQGPPDTRELIRAFN MS RV+RMI+EKDVMLGAIGHDLRTPLAALRVRVE+VEDETERERMV+GIED+++ L+DILSLARLGRS EQADPVDIRSLIET+VDEF+DLG  V YQRGEKQ   +RETL+RRALRNL+GNA
Sbjct:   63 RPAQRRNSNRLRRWGQLRYSPDSPVTDNMRRLPELEARAGQALANMGIGFTEIRATVLTDLTSDMTGHVVGSNRGEWRNSPINRSMGGGTQKAETKGFVVISVQQDIGQWVSIASAVRERSPLLVRTLLVQTITIYLLMLIPLILLGRYISRPLKSLTARTRSFQPGTTETLEEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDETERERMVSGIEDMNNMLEDILSLARLGRSTEQADPVDIRSLIETVVDEFTDLGRDVRYQRGEKQIVAVRETLVRRALRNLVGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A220W3Z2_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W3Z2_9SPHN)

HSP 1 Score: 457 bits (1175), Expect = 1.950e-157
Identity = 239/313 (76.36%), Postives = 270/313 (86.26%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RP  R  +MR RRWG+L+Y  ES V   MRRLPELEARAGQAFANMGI F+DIRA    +L  DM+GH+IGA+R  WRN+PINRSMGG P   E RG+V ISA+Q DGQWVSIASTVR R+PL+VRTLLFQT TIYLLML+PLILLGRYISRPLKSLTARA +FQPG TE L EQGPPDTRELIRAFN MS RV+RMI+EKDVMLGAIGHDLRTPLAALRVRVE+VED+TERERM+ GIED+++ L+DILSLARLGRS +QADPVDIRSLIET+VDEF+DLG  V YQRGE+Q A +RETL+RRALRNL+GNA
Sbjct:   63 RPATRRTSMRSRRWGQLRYSAESPVADTMRRLPELEARAGQAFANMGIAFTDIRATMLDELTADMSGHVIGASRNEWRNSPINRSMGGGPERPEPRGFVIISAQQDDGQWVSIASTVRERSPLLVRTLLFQTFTIYLLMLIPLILLGRYISRPLKSLTARAQSFQPGTTEALAEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDDTERERMITGIEDMNNMLEDILSLARLGRSTQQADPVDIRSLIETVVDEFTDLGRTVRYQRGERQIAAVRETLVRRALRNLVGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A1B6Z5M0_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z5M0_9SPHN)

HSP 1 Score: 407 bits (1047), Expect = 5.030e-138
Identity = 211/313 (67.41%), Postives = 254/313 (81.15%), Query Frame = 1
Query:    1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RP+   G  R R+ G LK+  E+ ++  M RL ELE RA QA  NMG  FS+I A     LP  M G+++GANRG WRN+ INRSMG R  P +TRG+V +S ++ +GQWVSIAS VRGR+P+ +RTL+FQTITI+LL+L+PLIL GRYISRPLKSLT RA +FQPG  E L E+GPPDTR+LIRAFN MS+RVS M++EKDVMLGAIGHDLRTPLAALR+RVENVED++ER+RM+AGIED+D TLDDILSLARLGRSQEQ++P DIRSLIET+VDE+ D+GH + YQRG +Q A IR TLIRRALRNLIGNA
Sbjct:   63 RPLVERGPPRRRQRGHLKFTTETVISPDMNRLSELEVRAEQALTNMGFTFSEIEAVSVRQLPAAMEGYVVGANRGRWRNSSINRSMGSRRQPPQTRGFVILSIQRPNGQWVSIASAVRGRSPIFIRTLVFQTITIFLLLLIPLILFGRYISRPLKSLTVRAQSFQPGVNEALEERGPPDTRDLIRAFNDMSSRVSTMLDEKDVMLGAIGHDLRTPLAALRIRVENVEDDSERDRMIAGIEDMDQTLDDILSLARLGRSQEQSEPTDIRSLIETVVDEYKDMGHDISYQRGARQPAHIRATLIRRALRNLIGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: UPI001AA0345E (ATP-binding protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0345E)

HSP 1 Score: 322 bits (824), Expect = 2.610e-104
Identity = 177/310 (57.10%), Postives = 228/310 (73.55%), Query Frame = 1
Query:   10 RRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            RR G+ R RR  R     E+ +    +RLP LE RA  AF NMG+    +  A   +LP +M  ++IG  RG  R   + R++G R  P    GY+ +SA+ ADGQW++IAS +R R P ++RTLLFQT  IYL++L+PLI LGR+ISRPL++LT  A  F+PG +EP+ E GPPDTR+L+ AFNAM+ RV  M++EKDVMLGAIGHDLRTPLAALRVRVE+VED+ ERERM+AGI+D+D TLDDILSLARLGRS E+ +P DI +LIET+ DE++D+G +V + R  + +A IR TLIRRALRNLIGNA
Sbjct:   70 RRDGSRRGRR-NRPSVTAETMIGSTQQRLPVLEGRAALAFENMGVNVLAVEVARVDELPSNMINNVIGRGRG--RQQTL-RAVGYRNLPNVIDGYIIMSAQIADGQWLNIASAIRDRNPRLMRTLLFQTAVIYLILLIPLIWLGRHISRPLQALTKAAQDFKPGVSEPVVESGPPDTRQLMAAFNAMNGRVGSMLDEKDVMLGAIGHDLRTPLAALRVRVESVEDDNERERMIAGIDDMDRTLDDILSLARLGRSDERTEPTDISALIETVADEYTDMGEEVSFTRSGRITANIRATLIRRALRNLIGNA 375          
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A3B0SG56_9ZZZZ (Histidine kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SG56_9ZZZZ)

HSP 1 Score: 309 bits (791), Expect = 1.600e-100
Identity = 171/289 (59.17%), Postives = 210/289 (72.66%), Query Frame = 1
Query:   73 VTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
            V+  M RL E+E RA  AF NMG     + AA    LPP++   ++G  RGG       R+MG R       GYV +S +  DG+W+SIAS ++ R+P +V TLLFQT+ +YL++LVPL+LLGRYIS PL  LT  A  F+PG    + E GPPDTR+LI AFN M ARV  MI+EKDVMLGAIGHDLRTPL+ALRVR+ENVED+ ERERM+AGIED+D TLDDILSLARLGRS E+A+  DI +LIET+VDEFSD+G QV + R ++  A +R TLIRRALRNLIGNA
Sbjct:    2 VSNNMTRLLEIEERAAIAFDNMGFDIRSVEAAKVKILPPELESSVVGRRRGG----ASGRAMG-RQRKRIIDGYVLLSVQGLDGRWISIASIIQNRSPKIVGTLLFQTLILYLILLVPLVLLGRYISGPLADLTIGARNFKPGSNVMIEENGPPDTRQLIAAFNDMQARVGAMIDEKDVMLGAIGHDLRTPLSALRVRLENVEDDDERERMIAGIEDMDRTLDDILSLARLGRSGEKAESTDISALIETVVDEFSDMGEQVSFNRQKRVIARVRATLIRRALRNLIGNA 285          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2M7LE49_9SPHN4.770e-18387.22Histidine kinase n=1 Tax=Sphingomonadales bacteriu... [more]
A0A2G2D8P9_9SPHN1.100e-17383.07Histidine kinase n=1 Tax=Sphingopyxis sp. TaxID=19... [more]
A0A127MF07_9SPHN8.700e-16680.19Histidine kinase n=1 Tax=Sphingorhabdus sp. M41 Ta... [more]
A0A2D3RG52_9SPHN4.170e-15977.32Histidine kinase n=2 Tax=Sphingomonadaceae TaxID=4... [more]
UPI0015939BC66.600e-15876.62HAMP domain-containing histidine kinase n=2 Tax=Pa... [more]
A0A653JGU9_9SPHN6.830e-15876.36Histidine kinase n=1 Tax=Sphingorhabdus sp. 109 Ta... [more]
A0A220W3Z2_9SPHN1.950e-15776.36Histidine kinase n=1 Tax=Sphingorhabdus sp. SMR4y ... [more]
A0A1B6Z5M0_9SPHN5.030e-13867.41Histidine kinase n=1 Tax=Sphingomonadales bacteriu... [more]
UPI001AA0345E2.610e-10457.10ATP-binding protein n=1 Tax=Parasphingorhabdus sp.... [more]
A0A3B0SG56_9ZZZZ1.600e-10059.17Histidine kinase n=1 Tax=hydrothermal vent metagen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100573contigL-digitata_M_contig100573:1..939 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1248760.ANFZ01000006_gene2456
PFAMsHAMP,HATPase_c,HisKA
Model size939
Max annot lvl204457|Sphingomonadales
Hectar predicted targeting categoryother localisation
Exons1
Evalue8.53e-66
EggNOG OGsCOG0642@1|root,COG2205@2|Bacteria,1MUAK@1224|Proteobacteria,2TSUC@28211|Alphaproteobacteria,2JZUS@204457|Sphingomonadales
DescriptionHistidine kinase
Cds size915
COG categoryT
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406608.4914773-CDS-L-digitata_M_contig100573:0..9151682406608.4914773-CDS-L-digitata_M_contig100573:0..915Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100573 1..915 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406608.5122688-UTR-L-digitata_M_contig100573:915..9391682406608.5122688-UTR-L-digitata_M_contig100573:915..939Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig100573 916..939 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100573.1.1prot_L-digitata_M_contig100573.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100573 1..915 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100573.1.1

>prot_L-digitata_M_contig100573.1.1 ID=prot_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp
MRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFT
TDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADG
QWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLT
ARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAI
GHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRS
QEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRN
LIGNA
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mRNA from alignment at L-digitata_M_contig100573:1..939-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100573.1.1 ID=mRNA_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=939bp|location=Sequence derived from alignment at L-digitata_M_contig100573:1..939- (Laminaria digitata LdigPH10_18mv male)
CGTCCGGTCCGGCGCGGAGGCGCAATGCGGCCACGGCGCTGGGGACGGCT GAAATATGGTCCGGAAAGCGCGGTGACCGGACGCATGCGGCGACTGCCGG AGCTGGAAGCGCGCGCCGGCCAGGCCTTTGCCAATATGGGCATCGGCTTT TCCGACATCAGGGCGGCCTTCACCACCGACCTGCCGCCGGACATGACGGG GCATCTAATCGGAGCCAACCGGGGCGGCTGGCGGAACAACCCGATCAACC GGTCGATGGGTGGCAGGCCCGCACCGACGGAAACCAGGGGCTATGTGACG ATTTCCGCACGGCAGGCGGACGGTCAGTGGGTCAGCATAGCCTCGACAGT GCGCGGACGCACGCCGCTGATGGTCCGGACCCTGTTGTTTCAGACAATAA CCATCTATCTGCTGATGCTGGTCCCGCTGATTCTGCTCGGCCGCTATATT TCGCGTCCGCTGAAATCGCTGACCGCCAGGGCCCATGCCTTTCAGCCCGG CGAGACCGAACCGCTGCCGGAGCAGGGGCCTCCCGACACCAGGGAATTGA TCCGGGCCTTCAATGCGATGAGCGCCCGCGTCAGCCGCATGATCAATGAA AAGGACGTGATGCTCGGCGCGATCGGTCATGACTTGCGCACCCCGCTGGC CGCGTTGCGGGTGCGGGTCGAAAATGTCGAAGACGAGACCGAACGGGAAA GAATGGTCGCCGGGATCGAGGATATCGACCACACGCTGGACGATATCCTG TCGCTGGCCCGGCTGGGCCGCTCGCAGGAGCAGGCCGATCCGGTCGACAT CCGTTCGCTGATCGAGACGATTGTCGACGAATTCAGCGATCTCGGACACC AGGTTCATTATCAGCGCGGCGAGAAGCAGAGCGCCCTGATCCGCGAAACG CTGATCCGCCGGGCGCTACGCAATCTCATCGGCAATGCC
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Coding sequence (CDS) from alignment at L-digitata_M_contig100573:1..939-

>mRNA_L-digitata_M_contig100573.1.1 ID=mRNA_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig100573:1..939- (Laminaria digitata LdigPH10_18mv male)
ATGCGGCCACGGCGCTGGGGACGGCTGAAATATGGTCCGGAAAGCGCGGT
GACCGGACGCATGCGGCGACTGCCGGAGCTGGAAGCGCGCGCCGGCCAGG
CCTTTGCCAATATGGGCATCGGCTTTTCCGACATCAGGGCGGCCTTCACC
ACCGACCTGCCGCCGGACATGACGGGGCATCTAATCGGAGCCAACCGGGG
CGGCTGGCGGAACAACCCGATCAACCGGTCGATGGGTGGCAGGCCCGCAC
CGACGGAAACCAGGGGCTATGTGACGATTTCCGCACGGCAGGCGGACGGT
CAGTGGGTCAGCATAGCCTCGACAGTGCGCGGACGCACGCCGCTGATGGT
CCGGACCCTGTTGTTTCAGACAATAACCATCTATCTGCTGATGCTGGTCC
CGCTGATTCTGCTCGGCCGCTATATTTCGCGTCCGCTGAAATCGCTGACC
GCCAGGGCCCATGCCTTTCAGCCCGGCGAGACCGAACCGCTGCCGGAGCA
GGGGCCTCCCGACACCAGGGAATTGATCCGGGCCTTCAATGCGATGAGCG
CCCGCGTCAGCCGCATGATCAATGAAAAGGACGTGATGCTCGGCGCGATC
GGTCATGACTTGCGCACCCCGCTGGCCGCGTTGCGGGTGCGGGTCGAAAA
TGTCGAAGACGAGACCGAACGGGAAAGAATGGTCGCCGGGATCGAGGATA
TCGACCACACGCTGGACGATATCCTGTCGCTGGCCCGGCTGGGCCGCTCG
CAGGAGCAGGCCGATCCGGTCGACATCCGTTCGCTGATCGAGACGATTGT
CGACGAATTCAGCGATCTCGGACACCAGGTTCATTATCAGCGCGGCGAGA
AGCAGAGCGCCCTGATCCGCGAAACGCTGATCCGCCGGGCGCTACGCAAT
CTCATCGGCAATGCC
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