mRNA_L-digitata_M_contig100573.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2M7LE49_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LE49_9SPHN) HSP 1 Score: 522 bits (1345), Expect = 4.770e-183 Identity = 273/313 (87.22%), Postives = 288/313 (92.01%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RP RRGGAMR RRWG+LKYG ESAVT M RLPELEARAGQAFANMGIGFSDIRA FT +L DM+GHLIGANRG WRNNPINRSMG + P ETRGYV ISA+QADGQWVSIAS VR RTPLM+RTLLFQTITIYLLML+PLILLGRYISRPLKSLTARAH FQPG++E L EQGPPDTRELIRAFNAMS RVS MINEKDVMLGAIGHDLRTPLAALRVRVENVED+ ERERM+AGIEDIDHTLDDILSLARLGRS EQADPVDIRSLIETIVDEF+DLGH+VHYQRG+KQSALIRETL+RRALRNLIGNA
Sbjct: 77 RPGRRGGAMRARRWGQLKYGSESAVTDGMNRLPELEARAGQAFANMGIGFSDIRATFTRNLTADMSGHLIGANRGEWRNNPINRSMGDKRMPPETRGYVIISAQQADGQWVSIASVVRERTPLMIRTLLFQTITIYLLMLIPLILLGRYISRPLKSLTARAHNFQPGDSEDLAEQGPPDTRELIRAFNAMSGRVSSMINEKDVMLGAIGHDLRTPLAALRVRVENVEDDIERERMIAGIEDIDHTLDDILSLARLGRSAEQADPVDIRSLIETIVDEFTDLGHEVHYQRGDKQSALIRETLVRRALRNLIGNA 389
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2G2D8P9_9SPHN (Histidine kinase n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D8P9_9SPHN) HSP 1 Score: 498 bits (1282), Expect = 1.100e-173 Identity = 260/313 (83.07%), Postives = 278/313 (88.82%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
R +RRGG MR +RWGRLKY P+SAVT M+RLPELEARAGQAFANMG GFSDIR F D+ DM GH+IGANR GWRNNPINRSMG R P E G+V ISARQADGQWVSIAS VR RTPL+VRTLLFQTITIYLLML+PLILLGRYISRPLKSLTARA FQPGETE LPEQGPPDTRELIRAFN MS RV+ M+NEKDVMLGAIGHDLRTPLAALRVRVE+VED+ ERERM+AGIEDIDH LDDILSLARLGRS EQAD VDIRSLIETIVDEF+DLGH+V YQRGEKQSA+IRETL+RRALRNLIGNA
Sbjct: 63 RSMRRGGDMRAKRWGRLKYSPQSAVTDDMQRLPELEARAGQAFANMGFGFSDIRVTFIDDMTSDMNGHMIGANRRGWRNNPINRSMGDRRTPPEITGFVIISARQADGQWVSIASAVRQRTPLLVRTLLFQTITIYLLMLIPLILLGRYISRPLKSLTARAQGFQPGETEELPEQGPPDTRELIRAFNVMSGRVNAMLNEKDVMLGAIGHDLRTPLAALRVRVESVEDDGERERMIAGIEDIDHMLDDILSLARLGRSGEQADRVDIRSLIETIVDEFTDLGHEVRYQRGEKQSAVIRETLVRRALRNLIGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A127MF07_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. M41 TaxID=1806885 RepID=A0A127MF07_9SPHN) HSP 1 Score: 478 bits (1230), Expect = 8.700e-166 Identity = 251/313 (80.19%), Postives = 279/313 (89.14%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RP RR G MR RRWG+LKY ESAV+ MRRLPELEARAGQAFANMGI FSDIRA +L DM+GHLIGANR WR+NPINRSMGG +P++TRG+V ISA+QADGQWVSIAS VR RTPL+VRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTA+A +FQPGE+ L EQGPPDTRELIRAFN MS RV+ MI+EKDVMLGAIGHDLRTPLAALRVRVENVED+ +RE+M+AGIEDIDHTLDDILSLARLGRS+E +DPVDIRSLIETIVDEF+DLG++V YQRG+KQ A +RETL+RRALRNLIGNA
Sbjct: 63 RPARRNGDMRARRWGQLKYSDESAVSDDMRRLPELEARAGQAFANMGISFSDIRATSIRELTGDMSGHLIGANRREWRDNPINRSMGGNRSPSQTRGFVIISAQQADGQWVSIASVVRERTPLLVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTAKAQSFQPGESGELTEQGPPDTRELIRAFNDMSRRVNGMIDEKDVMLGAIGHDLRTPLAALRVRVENVEDDDDREKMIAGIEDIDHTLDDILSLARLGRSREHSDPVDIRSLIETIVDEFTDLGNEVRYQRGDKQIAPVRETLVRRALRNLIGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A2D3RG52_9SPHN (Histidine kinase n=2 Tax=Sphingomonadaceae TaxID=41297 RepID=A0A2D3RG52_9SPHN) HSP 1 Score: 461 bits (1186), Expect = 4.170e-159 Identity = 242/313 (77.32%), Postives = 269/313 (85.94%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RPV R MRPRRWG+L+Y ES VT MRRLPELEARAGQAFANMGIGF+DIRA DL DMTGH+IG R R NPINRSMGG P +ET+G++ ISA+Q DGQWVSIAS VR R+PL+VRTL+FQT+TIYLLML+PLILLGRYISRPLKSLTA A +F+PG TE L EQGPPDTRELIRAFN MS RV+RMI EKDVMLGAIGHDLRTPLAALRVRVENVEDE ERERMVAGIE++++ L+DILSLARLGRS EQ+DPVDIRSLIET+VDEFSDLG V YQRGEKQ A +RETL+RRALRNL+GNA
Sbjct: 63 RPVSRRDPMRPRRWGQLRYSAESPVTDDMRRLPELEARAGQAFANMGIGFADIRATLRGDLTSDMTGHVIGTGRNERRKNPINRSMGGGPETSETKGFIIISAQQDDGQWVSIASAVRERSPLLVRTLIFQTVTIYLLMLIPLILLGRYISRPLKSLTATAQSFRPGTTEALEEQGPPDTRELIRAFNDMSGRVTRMIEEKDVMLGAIGHDLRTPLAALRVRVENVEDEVERERMVAGIEEMNNMLEDILSLARLGRSTEQSDPVDIRSLIETVVDEFSDLGRDVRYQRGEKQIAAVRETLVRRALRNLVGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: UPI0015939BC6 (HAMP domain-containing histidine kinase n=2 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI0015939BC6) HSP 1 Score: 458 bits (1178), Expect = 6.600e-158 Identity = 236/308 (76.62%), Postives = 269/308 (87.34%), Query Frame = 1
Query: 16 GGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
GGA RR RLKYGPE+AVT M+RLPELEARAGQAF+NMGIGFSDIRAA L PDMTGH+IG+NRG WR+NPINRSMG R P ET+G+V +SAR+ DGQW+S+AS VR R P++VRTLLFQTI YLLML+PL+LLGRYISRPLK+LTA A +FQPG+TE L EQGPPDTRELIRAFN MS RVS M+NEK+VMLGAIGHDLRTPLAALRVR+ENV+D+ ERE+MV GIED+D LDDILSLARLGRS EQ++PVDIRS+IET+VDEF+DLGHQV YQRGEKQ A +RETLIRRALRNLIGN+
Sbjct: 68 GGANGGRRGTRLKYGPETAVTEDMKRLPELEARAGQAFSNMGIGFSDIRAAEVRRLTPDMTGHVIGSNRGKWRDNPINRSMGSRATPLETKGFVIVSARRDDGQWISVASAVRERNPMLVRTLLFQTIITYLLMLIPLVLLGRYISRPLKTLTATARSFQPGKTETLEEQGPPDTRELIRAFNDMSGRVSNMLNEKNVMLGAIGHDLRTPLAALRVRIENVDDDIEREKMVDGIEDMDQMLDDILSLARLGRSSEQSNPVDIRSMIETVVDEFTDLGHQVRYQRGEKQIATVRETLIRRALRNLIGNS 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A653JGU9_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. 109 TaxID=2653173 RepID=A0A653JGU9_9SPHN) HSP 1 Score: 458 bits (1178), Expect = 6.830e-158 Identity = 239/313 (76.36%), Postives = 270/313 (86.26%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RP +R + R RRWG+L+Y P+S VT MRRLPELEARAGQA ANMGIGF++IRA TDL DMTGH++G+NRG WRN+PINRSMGG ET+G+V IS +Q GQWVSIAS VR R+PL+VRTLL QTITIYLLML+PLILLGRYISRPLKSLTAR +FQPG TE L EQGPPDTRELIRAFN MS RV+RMI+EKDVMLGAIGHDLRTPLAALRVRVE+VEDETERERMV+GIED+++ L+DILSLARLGRS EQADPVDIRSLIET+VDEF+DLG V YQRGEKQ +RETL+RRALRNL+GNA
Sbjct: 63 RPAQRRNSNRLRRWGQLRYSPDSPVTDNMRRLPELEARAGQALANMGIGFTEIRATVLTDLTSDMTGHVVGSNRGEWRNSPINRSMGGGTQKAETKGFVVISVQQDIGQWVSIASAVRERSPLLVRTLLVQTITIYLLMLIPLILLGRYISRPLKSLTARTRSFQPGTTETLEEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDETERERMVSGIEDMNNMLEDILSLARLGRSTEQADPVDIRSLIETVVDEFTDLGRDVRYQRGEKQIVAVRETLVRRALRNLVGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A220W3Z2_9SPHN (Histidine kinase n=1 Tax=Sphingorhabdus sp. SMR4y TaxID=2584094 RepID=A0A220W3Z2_9SPHN) HSP 1 Score: 457 bits (1175), Expect = 1.950e-157 Identity = 239/313 (76.36%), Postives = 270/313 (86.26%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RP R +MR RRWG+L+Y ES V MRRLPELEARAGQAFANMGI F+DIRA +L DM+GH+IGA+R WRN+PINRSMGG P E RG+V ISA+Q DGQWVSIASTVR R+PL+VRTLLFQT TIYLLML+PLILLGRYISRPLKSLTARA +FQPG TE L EQGPPDTRELIRAFN MS RV+RMI+EKDVMLGAIGHDLRTPLAALRVRVE+VED+TERERM+ GIED+++ L+DILSLARLGRS +QADPVDIRSLIET+VDEF+DLG V YQRGE+Q A +RETL+RRALRNL+GNA
Sbjct: 63 RPATRRTSMRSRRWGQLRYSAESPVADTMRRLPELEARAGQAFANMGIAFTDIRATMLDELTADMSGHVIGASRNEWRNSPINRSMGGGPERPEPRGFVIISAQQDDGQWVSIASTVRERSPLLVRTLLFQTFTIYLLMLIPLILLGRYISRPLKSLTARAQSFQPGTTEALAEQGPPDTRELIRAFNDMSDRVTRMIDEKDVMLGAIGHDLRTPLAALRVRVESVEDDTERERMITGIEDMNNMLEDILSLARLGRSTQQADPVDIRSLIETVVDEFTDLGRTVRYQRGERQIAAVRETLVRRALRNLVGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A1B6Z5M0_9SPHN (Histidine kinase n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z5M0_9SPHN) HSP 1 Score: 407 bits (1047), Expect = 5.030e-138 Identity = 211/313 (67.41%), Postives = 254/313 (81.15%), Query Frame = 1
Query: 1 RPVRRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RP+ G R R+ G LK+ E+ ++ M RL ELE RA QA NMG FS+I A LP M G+++GANRG WRN+ INRSMG R P +TRG+V +S ++ +GQWVSIAS VRGR+P+ +RTL+FQTITI+LL+L+PLIL GRYISRPLKSLT RA +FQPG E L E+GPPDTR+LIRAFN MS+RVS M++EKDVMLGAIGHDLRTPLAALR+RVENVED++ER+RM+AGIED+D TLDDILSLARLGRSQEQ++P DIRSLIET+VDE+ D+GH + YQRG +Q A IR TLIRRALRNLIGNA
Sbjct: 63 RPLVERGPPRRRQRGHLKFTTETVISPDMNRLSELEVRAEQALTNMGFTFSEIEAVSVRQLPAAMEGYVVGANRGRWRNSSINRSMGSRRQPPQTRGFVILSIQRPNGQWVSIASAVRGRSPIFIRTLVFQTITIFLLLLIPLILFGRYISRPLKSLTVRAQSFQPGVNEALEERGPPDTRDLIRAFNDMSSRVSTMLDEKDVMLGAIGHDLRTPLAALRIRVENVEDDSERDRMIAGIEDMDQTLDDILSLARLGRSQEQSEPTDIRSLIETVVDEYKDMGHDISYQRGARQPAHIRATLIRRALRNLIGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: UPI001AA0345E (ATP-binding protein n=1 Tax=Parasphingorhabdus sp. JHSY0214 TaxID=2806553 RepID=UPI001AA0345E) HSP 1 Score: 322 bits (824), Expect = 2.610e-104 Identity = 177/310 (57.10%), Postives = 228/310 (73.55%), Query Frame = 1
Query: 10 RRGGAMRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
RR G+ R RR R E+ + +RLP LE RA AF NMG+ + A +LP +M ++IG RG R + R++G R P GY+ +SA+ ADGQW++IAS +R R P ++RTLLFQT IYL++L+PLI LGR+ISRPL++LT A F+PG +EP+ E GPPDTR+L+ AFNAM+ RV M++EKDVMLGAIGHDLRTPLAALRVRVE+VED+ ERERM+AGI+D+D TLDDILSLARLGRS E+ +P DI +LIET+ DE++D+G +V + R + +A IR TLIRRALRNLIGNA
Sbjct: 70 RRDGSRRGRR-NRPSVTAETMIGSTQQRLPVLEGRAALAFENMGVNVLAVEVARVDELPSNMINNVIGRGRG--RQQTL-RAVGYRNLPNVIDGYIIMSAQIADGQWLNIASAIRDRNPRLMRTLLFQTAVIYLILLIPLIWLGRHISRPLQALTKAAQDFKPGVSEPVVESGPPDTRQLMAAFNAMNGRVGSMLDEKDVMLGAIGHDLRTPLAALRVRVESVEDDNERERMIAGIDDMDRTLDDILSLARLGRSDERTEPTDISALIETVADEYTDMGEEVSFTRSGRITANIRATLIRRALRNLIGNA 375
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Match: A0A3B0SG56_9ZZZZ (Histidine kinase n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0SG56_9ZZZZ) HSP 1 Score: 309 bits (791), Expect = 1.600e-100 Identity = 171/289 (59.17%), Postives = 210/289 (72.66%), Query Frame = 1
Query: 73 VTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTTDLPPDMTGHLIGANRGGWRNNPINRSMGGRPAPTETRGYVTISARQADGQWVSIASTVRGRTPLMVRTLLFQTITIYLLMLVPLILLGRYISRPLKSLTARAHAFQPGETEPLPEQGPPDTRELIRAFNAMSARVSRMINEKDVMLGAIGHDLRTPLAALRVRVENVEDETERERMVAGIEDIDHTLDDILSLARLGRSQEQADPVDIRSLIETIVDEFSDLGHQVHYQRGEKQSALIRETLIRRALRNLIGNA 939
V+ M RL E+E RA AF NMG + AA LPP++ ++G RGG R+MG R GYV +S + DG+W+SIAS ++ R+P +V TLLFQT+ +YL++LVPL+LLGRYIS PL LT A F+PG + E GPPDTR+LI AFN M ARV MI+EKDVMLGAIGHDLRTPL+ALRVR+ENVED+ ERERM+AGIED+D TLDDILSLARLGRS E+A+ DI +LIET+VDEFSD+G QV + R ++ A +R TLIRRALRNLIGNA
Sbjct: 2 VSNNMTRLLEIEERAAIAFDNMGFDIRSVEAAKVKILPPELESSVVGRRRGG----ASGRAMG-RQRKRIIDGYVLLSVQGLDGRWISIASIIQNRSPKIVGTLLFQTLILYLILLVPLVLLGRYISGPLADLTIGARNFKPGSNVMIEENGPPDTRQLIAAFNDMQARVGAMIDEKDVMLGAIGHDLRTPLSALRVRLENVEDDDERERMIAGIEDMDRTLDDILSLARLGRSGEKAESTDISALIETVVDEFSDMGEQVSFNRQKRVIARVRATLIRRALRNLIGNA 285 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100573.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100573.1.1 >prot_L-digitata_M_contig100573.1.1 ID=prot_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=305bp MRPRRWGRLKYGPESAVTGRMRRLPELEARAGQAFANMGIGFSDIRAAFTback to top mRNA from alignment at L-digitata_M_contig100573:1..939- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100573.1.1 ID=mRNA_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=939bp|location=Sequence derived from alignment at L-digitata_M_contig100573:1..939- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100573:1..939- >mRNA_L-digitata_M_contig100573.1.1 ID=mRNA_L-digitata_M_contig100573.1.1|Name=mRNA_L-digitata_M_contig100573.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=915bp|location=Sequence derived from alignment at L-digitata_M_contig100573:1..939- (Laminaria digitata LdigPH10_18mv male)back to top |