mRNA_L-digitata_M_contig10041.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig10041.1.1
Unique NamemRNA_L-digitata_M_contig10041.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig10041.1.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 167 bits (423), Expect = 3.410e-40
Identity = 124/194 (63.92%), Postives = 133/194 (68.56%), Query Frame = 1
Query:  214 RGSRRPPVNAGEWKGQRGMQRNRVAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGXXXXXXXXXXXXX----QQPQPSPRLLHQHXXXXXXHPMMAAPGHH--GQA-HAMMAMPAAMQG-QLRGQMPGQPGVLVVQQPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPATYGAPVPGHAIYAP-GFIDPAQA 768
            RGSRRP VNAGEWKGQRGMQRNR+AEKSDPDFVRNYD+YRPSFAPYRQLADPGGG      XXXXXXX    QQPQPSPRLL QH      H MM+A   H  GQA HAMMA+PA MQG QLRGQMPGQ     +                      XXXXXXXXX   P+ YGA VPGHA+YA  G++DPAQA
Sbjct:  574 RGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLADPGGGGGGGRGXXXXXXXXXXXQQPQPSPRLLQQHP-----HAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQMEAQAMXX--------------------XXXXXXXXXGGAPSVYGAAVPGHAMYAAQGYVDPAQA 742          
BLAST of mRNA_L-digitata_M_contig10041.1.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI)

HSP 1 Score: 129 bits (324), Expect = 1.130e-27
Identity = 128/198 (64.65%), Postives = 132/198 (66.67%), Query Frame = 1
Query:    1 GFGSGRGRPIAGGGKGGNXXXXXXXXXXXXXXXXXXGLQQ-GPDG-DRGDLXXXXXXXXXXXXXXXXXXXXGGRGS-RRPPVNAGEWKGQRGMQRNRVAEKSDPDFVRNYDNYRPSFAPYRQLADPGGGXXXXXXXXXXXXXQQPQPSPRLLHQHXXXXXXHPMMAAPGH-HGQA-HAMMAMPAAMQG-QLRGQMPGQ 576
            GFGSGRG+P+ GGG             XXXX     GLQQ G DG DRGD    XXXXXX      XXXXX      RRP VNAGEWKGQRGMQRNR+AEKSDPDFVRNYDNYRPSFAPYRQLADPGG     XXXXXXXXX             XXXXXX  M AA  H HGQA HAMMA+PA MQG QLRGQMPGQ
Sbjct:  629 GFGSGRGKPVPGGGX------------XXXXGGRAGGLQQQGSDGPDRGDYGRGXXXXXXGPGGRMXXXXXXXXXXXRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGRGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 814          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10041.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC01_9PHAE3.410e-4063.92SUZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LM72_ECTSI1.130e-2764.65R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig10041contigL-digitata_M_contig10041:136..7280 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Model size1731
Hectar predicted targeting categoryother localisation
Exons7
Ec32 ortholog descriptionhypothetical protein
Ec32 orthologEc-18_002725.1
Cds size1731
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig10041.1.1prot_L-digitata_M_contig10041.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig10041 136..7280 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406607.0077372-CDS-L-digitata_M_contig10041:135..2211682406607.0077372-CDS-L-digitata_M_contig10041:135..221Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 136..221 -
1682406607.0177028-CDS-L-digitata_M_contig10041:269..6101682406607.0177028-CDS-L-digitata_M_contig10041:269..610Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 270..610 -
1682406607.0266576-CDS-L-digitata_M_contig10041:1763..18731682406607.0266576-CDS-L-digitata_M_contig10041:1763..1873Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 1764..1873 -
1682406607.0350573-CDS-L-digitata_M_contig10041:1963..25811682406607.0350573-CDS-L-digitata_M_contig10041:1963..2581Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 1964..2581 -
1682406607.0439022-CDS-L-digitata_M_contig10041:3718..38351682406607.0439022-CDS-L-digitata_M_contig10041:3718..3835Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 3719..3835 -
1682406607.0579803-CDS-L-digitata_M_contig10041:6752..68291682406607.0579803-CDS-L-digitata_M_contig10041:6752..6829Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 6753..6829 -
1682406607.0698366-CDS-L-digitata_M_contig10041:6898..72801682406607.0698366-CDS-L-digitata_M_contig10041:6898..7280Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig10041 6899..7280 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig10041.1.1

>prot_L-digitata_M_contig10041.1.1 ID=prot_L-digitata_M_contig10041.1.1|Name=mRNA_L-digitata_M_contig10041.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=577bp
GFGSGRGRPIAGGGKGGNGGGGGGGRGGGERGGRVGGLQQGPDGDRGDLG
GGGGGGRGRGGERAGGRTGGGRGSRRPPVNAGEWKGQRGMQRNRVAEKSD
PDFVRNYDNYRPSFAPYRQLADPGGGGGHGGHGGHGGHGQQPQPSPRLLH
QHQQQQQQHPMMAAPGHHGQAHAMMAMPAAMQGQLRGQMPGQPGVLVVQQ
PQQQQQQPWQQQQQMEAQAMAAAAAAAAAGGGPATYGAPVPGHAIYAPGF
IDPAQAQAQAQAQAQAQAQAAAAAAAAAAAAAAAAAAGATGTTGSAGIGV
PAPGAAAPTMRSQTHQPRQQRQQQQQQQQQQQQLQQQQLQQQQQQQRQMA
YLHPQQQQQQAVTAGVLPAQPGQQQPGQQQQPQQQAQAQAQQQQTQHQQP
PQAGLLQTPHMQAGVAVAGGYMTAQEYYGAHQQAIFYQDPNMPGMAMGYG
VQHAQIPQQQQQAYIVPVQQQQQQQQQQPQQQQQQHQQHQHHPYQHQVFP
VGAMQQQPMPPQQQQQQQHRPQHQRHHGNNHQHHQSGGGGGGGGGRHSGA
GGAGGGGGGGRTVPNRGYQSDFPPLG*
back to top

mRNA from alignment at L-digitata_M_contig10041:136..7280-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig10041.1.1 ID=mRNA_L-digitata_M_contig10041.1.1|Name=mRNA_L-digitata_M_contig10041.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=7145bp|location=Sequence derived from alignment at L-digitata_M_contig10041:136..7280- (Laminaria digitata LdigPH10_18mv male)
GGTTTCGGCAGCGGTCGGGGTAGGCCTATTGCCGGCGGGGGCAAGGGCGG CAACGGTGGCGGAGGCGGGGGAGGGAGAGGGGGGGGCGAGCGCGGGGGAA GGGTAGGGGGGCTCCAGCAGGGCCCGGACGGTGATAGGGGTGACCTCGGT GGGGGAGGCGGTGGCGGGCGGGGGAGGGGGGGAGAGCGCGCGGGGGGCAG GACGGGGGGGGGGAGGGGAAGCCGAAGACCTCCCGTAAACGCGGGCGAGT GGAAGGGGCAGAGAGGCATGCAGCGCAACCGCGTGGCCGAGAAATCGGAC CCGGATTTCGTGCGGAACTACGACAACTACCGCCCGAGCTTCGCGCCTTA CCGGCAGCTCGCGGACCCGGGGGGTGGTGGCGGTGGCGGCGGGTATGGAG GAGGCGGTGGGGGTGGAGGGCGTGGGGGGCGGGGGGGGCGAGAGGGACAA GGGCACGGAGGGCATGGGGGGCATGGGGGGCACGGGCAGCAGCCACAGCC GTCGCCGCGATTGCTCCACCAGCACCAGGTGCGTTTATTTGGGGGGGGGG GTTCGCTTGCCGCGTTTTTTTTTTGTTGTTGTGGTTTTGTTTCTAGTCTT GACTTTATTTATAATTCCTTTGGGACTTTTGGTGGAACAGTGTCGAACAC ATCTCACATGTGACGATTACAGCATCGGCCACGCCAAGCAGCCCCGGCTG CCGCGGTAGGAGACGAGTCCGAAGTGCGATGCAAGGAGCTGTACGACACA CGACACACACGCAGCGCGGTGATACTCGCATTGCTGCACGTTCTTCCTAG AGTGTTGATCATTATAGCATACTTGTCGTGTTTTGGTCATTTTACATGGG CCTCGAAAGAGTTCACATCTCGGACAGACCATCGATTCCCAGTTCATGAC CTAGATCTTTCAAGGCAGATAGATTCCTGATCTGTAGGTAGGATCTAGCT CATTTTGCCGGGTGGGACCCGTATATTCTGCATGGTATTATATATAGGAT ATGTTTCCTGAGTTGGATCTGTACTGTACATATCCTGCACAACAGCTCGT AACGGCAGGTTAGGATCTAGATCATCTAGATCATCTAGATCATCTAGATG GCGATCTGTCCAACGTGTGAAAGAGTTATGACAAAAATGTCAATTACCCA CGATACAGCCCATGAGGGGTCCCGACTCCGCGCGAGCAATGCGCCGTGAA CTCGTTTTTACAGAACTAACTATAAACTCGTTTGGGCTGGTCGGTATTGC TTGCTGCCCGTTCGCTTGCCCGGTGGCTAATTATTTTTCCTTTAGCTTGC AATACTTCTTTTTATGTTGTTCGTTCTTGCCCGGTGGGTACGTACGAGTA GCTGGTACGAGGAACGAACGCCTGCTGTGTTCTCTCTTTTCAGCTTGCGA CACCCCCGAGAGTTAAAAGTCAACCACGCGAGTAGAAACTAAAAAGTACA TCAGCTGTGAGTTGTGAGTTTTCTCGATTTGATTTCTGCTCTTTTCTCGT TTTCTCGATTTTCGGCGTGGTCTGAGGAACTCGCTTGTAGCTTGTAGCTG GCGCTGACTGTCGGTGTGTATCGCCTGTGTGACAAAAAAAAAAGGCTTGA TGGGTGTAACTCCCCTGAGCAACAGATTCCTTCGCCCGGTTATCGCTCGT TTCGACGAAAGGCATTATTTCCACGGTGTAACGAACGCCCTTGCGACAAA TTGATCCCTTAGTTCGTGTAGCACTCGTGTGACGAAAACTATTTTTTTGG TCAGTGTAACTCCCATTACGAAAAACAAAGGAGTTCATCGGTGTACCTAT CTCGCCCGTGTGACGGAAAAGCAAACAAACGTTCGTCAGTATAATAGCGC CCATTCCAAAAAAGAAACGTGATCTGTGTGATGAGAAATAAACATTCGTC GGTGATCTAGTGATCTAACTACCGCGAAAGCCAATTAAACAGACGTCGTC GGTGTATCGCCCCGAATAAAAAAAAAAAAAAAAGAGTCGTAGAAAAAATA GTCGTCAGTAAAACGCCCATTACGGAAAAAACTTGGTCGGTGTAAGGTCT GTGTGTGACGAGAAAAAAGCAGTCGTCGGTGAACCGCCCCGAGTGCAAAA AGCAAAAACACGGTCGTCGATGTAACTATTAATAACGCCTTGAGTGACGT TAAAATAACAAGCTTTTGTGTAGCGCCTGTTACACTACAAAAAAGAAAAT CTTCGTCGGGATACCGCCGTACGTATTGCCCGCGTGACGAAAAACTCCTT CGGCTGTGCATGATATGCAACGCCCCGTGTGACGGACGACCCCTATCTGC AAACCGGGTGTGCAAATAATATTTTCAACACCTCCACCCTGCTCCCGCTT GGCGCCCTGACCCCACCCCGACCTGAACCCACCCGGACCTGCGCCTTCCA AACTCGCTCTGAGTGTACATACATATTTAGCCGCCAACAGGGCTCACCAA GCACTGATCCCACGCTGACCTGATCCTTCCACACCTCGGACACATCACCG ATTCCTGCTTAATGATCTAGATCTTTCAGGGCAGATATATTTCCTGAACT GTATGACCTAGCTCATGTTGCGGGGTGGGAGCTGTATAATCTTCATGATC TAGGACATGTTTCCTGGGTTGGATCTGTACTAAACAGATCCTGCACAACA TCTCATAATGGCAGGTTAGGATCTAGATGATCCAGATCATGATCTGTCCG ACGTGTGGATCCTTCTAAATCGAGGGTTTCCACCAAATGGCCAGAACGAA AAGCAACAGGCACTAAAAGCAGCACTAAGGTCGTCAGAGTACCGGTACCA GTCCTCGGGACTCAATGACTCGCCAGTACCAGTCATTTTGGAGGACCCAG TTCCCAGGGTAGGGGGCTGAAGTGACTTAGTCCATCCAGTCCGAAGGATA CCTGGGGGCTGAAATGACTGAGTCCCGCCGGTCCCAAGGGTATCTGGGGG CTAAAATGACTGAGTCCCGCCAGTTCCAACGGCACGAGAAGCTGAAATGA CTGGTACCGGGCGGACTGGTACTCTGACTACCTTTGCGGCATATGCTAAA AGTGGTGCGGAGTTTTATTTGCGTACCTTGTGTGCAATTGGCGTTCCCTC GTGTGACGGGAACCACGTAACCCTCTTGGGACTTCAGCTGGGAAAAATTG CACTAAAAAGTGACGATTACGGCAACGGCCACTGTGCGTGATTGGGGGAT GATACAAATTGGTGTCCGAGTTACAGTTCAGTGCAAGGAGTCGTACGGCA CAGGCGCAACGTTATCCTACCCGTGCTGCGGGGCGCTCACGCTGCTTGTA GACCGTCGATGACACTGGAGTTTCACTGTTTTGGTCGCTATTTCGGGGCC CCTAAAGGGGTTAAGACACGACTGACGCGGCTTCTTCCCCGCCCCCCCCG TTTTATCGTTTTGCCGTGTGCCTACCGCCGTGGCAACAGCAGCAGCAGCA GCAACAGCAACACCCAATGATGGCCGCCCCCGGACACCACGGACAGGCCC ACGCGATGATGGCGATGCCGGCGGCGATGCAAGGTCAACTCCGAGGCCAG ATGCCGGGACAGGTGTGTGGCGCGTATGTACAAACGCGCGCATTTTCGAG TCGAGTCTATTAAAAGTCGAGTGGGGTCGAGTCAAAGTCTAATGGTTAAC CTTGAATACTGCTAAGGTTGAAGTCAGGGGTTCAATACTCGGTACTCGAG TTTTTTTTCTTGAACGACACCAACTGCCGAGAGCGCTTAATGGCGAGAGC GCTTAATGGCGTGGGTAAGTAGATAAACACAATTCGACGAGAATCGACCA GGGAAAAAAGTGCTGAACTCTTCTCGCGATAATTTTGAAGGCGCGTACCG TAGTGGGGATGGGGGAGAAGAGCCTGCTTTGTGACCCGGGATCTGATTTG CGACTATTAATAGGAGAGAGCGAAAAAAGAAGGGCGAAGATAATAAATGG AATGGAAAAAAAAAGAAGGTCGAGTCGAGTCGAATCGAATCGAGTCGGAC CGGATCGATTCTTGCGAATCCTCCTGCATTTCTTTATATTTCTTGCGTTT GTAAGGGCGGTGGCGGGGGAAGGGAAGGGAAGGGGGTTGGGGGTTGGGGA GTTGGGAGGGGACGAAGGCGTCGATCATTGTCGGGGTCAGGGGGAGCGGG GGGTTCTATCATCGGAAACTTTTCGAACCAGTGGCTGTTTGCTGTCGATT TCCAAGTAAATACGTGGCTTGCCGTGAGTTAGAAGTGGTGGGTCTTTTGG GATGCGCCCACCCACGTGCCAAGCACCAACCCATCACCGGGCAGGCAGCG TGAAGCGGTGAACAGCACACCCGCAGAACAGAAAAACCAACCTCCCGCCA GTTGCCATAGTATATACCGGTAGGCAGTTTTGTTTTTTTCAGTCGATCGT GCCGCTTATAAACGATTCGACCCCAAACCACAACAACACACAACACCAAA ATCCACCGCCACACAAAACACTCACACCACACAACAAACAACACCACNNN NNNNNNNCCCAACCCCCCCCCCCCCCCCCCCCCCACCCACACCCGCCCTC TCCCCCCCCTCATATGACTACGGCCATGCTTGATAATGAGTACACCCCCC CCCCCCCCCCCCCCCACACACATACGACTACGGCCATGGATTATAATTAC TACACCCCGCCGTCCCCCACGCTCGCGCTTATACCGTGACGATTTACAGC CGGGCGTTCTGGTCGTGCAACAGCCACAGCAGCAGCAGCAGCAGCCGTGG CAGCAGCAGCAGCAGATGGAGGCACAGGCTATGGCTGCCGCCGCCGCCGC TGCTGCTGCAGGAGGAGGACCGGCGACGTACGGCGCTCCCGTCCCAGGGC ATGCGATTTACGCTCCGGGTTTCATAGACCCTGCGCAGGCGCAGGCGCAG GCACAGGCGCAGGCACAGGCGCAAGCGCAAGCGGCGGCGGCAGCGGCAGC AGCGGCGGCGGCGGCAGCGGCGGCGGCAGCTGCCGGGGCTACCGGTACGA CCGGTAGCGCGGGGATAGGGGTACCTGCCCCTGGCGCGGCCGCGCCCACC ATGCGTAGCCAGACACACCAACCGCGGCAGCAGCGGCAGCAGCAGCAGCA ACAGCAACAGCAGCAGCAGCAGCTACAGCAGCAGCAGCTGCAGCAACAGC AGCAGCAGCAACGGCAGATGGCTTATTTACACCCGCAACAGCAGCAGCAG CAGGCAGTGACTGCTGGGGTGCTGCCAGCTCAGCCGGGCCAGCAGCAGCC GGGCCAGCAGCAGCAGCCGCAGCAGCAGGCGCAGGCACAGGCGCAACAGC AGCAGACCCAACACCAGGTCCAGGCGCAGCAGCAAGCGCAGCAGCAGCAG GTGCAAGCGCAGCAGCAAGCGCAAGCACAGCACCCGCAGCAGCAGCAGCA ACAGCAGCAGCCACCGCAAGCAGGCCTGCTGCAGACGCCGCATATGCAGG CGGGCGTGGCTGTGGCGGGCGGGTACATGACAGCGCAGGAGTACTACGGG GCGCACCAGCAAGCGATGTGAGAGGATTGTACGAAAAATTGTACGCTCAG GCGATGGAGGTGTTGATTGCTTAGAGATAGAAGGTAGCTTGTTATTTCCT TTCCACGCAATGGAAGACTGAAAAGCTCCTGAAACAACCCCTGATTTCCT ATTGAAAGACGCCTCCCAGGTATTACCAATAATTTCCCAAGACCTGGTGT CGGGTAATCACTAACAAATCTTGGGTACAGTTACAGTTAGCGTGTTCGAG AAGCATTTATGGTGACGCCGGGGAGTAGCGAAGGAAAAGAGGTTATGAGG AGGGGGGGAGGGGCGGGGTCGGGGGATTCGGTTCTAGGTGTTTCCGGTGA CATTCCCGACCACAGACGACCCTCGCTGCACTATACCTGGTAACACACGT CTGCCTTTAATTTCAAGTAATTTGTTCCCCAAACGGGATTGCAGTCCTAA ACGGGTTAAAACGGGTTAACCCCTATACATATAGAATTAAACCCACGTTT TTGGGGGCAAACTACTTGGAAATCGTGTGAGACAATTTTTGCTATTCTGA AAGGGTTTCAATGGCTGTGAGGTAGCGGTATTATACGTCGCGGACTAGTG ACTTAGTTGGCTATTCACCCCTTTAGGACCGCACTCCCGTTTTGGGGACA AATTACTTGGAATTAGACTGAGAGTGTCCCCAAAACGGGAGTGCGGTCCT AAAGGGGTTAATAGGTATTACGGGTAGTTTGCGTGCTTCATTTAATCTTC GGAGTTGTGCATCTTTGTACCTGGCTGGCGCGTTTTTTTTTGTTCAACGC GTGTTTTCTATTGATGATGAAGACTATTTAATAGGCCAGTTAGCTGGCTT ACTTTCAAAGGCATTTCCGTACTTACTACTGCTGTCGACCCTGTATGTAG CCGTAAAGGCTGAACAGGGTCCCACGCTACGAAAACATGTTCGAGCGCTC TGACTTGATTGAGCCTAACAGCAACCCCCGTGGGGTCACTTGTTTTCCCT GCCCACTCTCATCAAGAACGGACACGTTTTCTTCACCCAACTCATAACGA ACCGTGAAGTCCAGCGAACTCACAGCCCTGTTAACCCCGCTCCCCGGGTT TCTGTTAGTTGATTTTTTTTGTTCGTCCCCTCTTGCCACGGCTATATGCG ACATGCCTCTGCGTTTCCAGATTTTACCAGGACCCTAACATGCCGGGCAT GGCCATGGGCTATGGCGTCCAACACGCACAGATTCCTCAGCAGCAGCAGC AGGCATACATTGTGCCCGTTCAGCAACAGCAGCAGCAACAACAGCAGCAG CCGCAACAGCAACAGCAGCAGCATCAGCAGCATCAGCATCACCCGTACCA ACACCAGGTGTTTCCGGTGGGAGCCATGCAGCAGCAACCGATGCCCCCCC AGCAGCAGCAGCAGCAGCAGCACCGCCCTCAGCATCAGAGACACCACGGC AACAACCACCAGCACCACCAAAGTGGAGGAGGCGGTGGCGGGGGCGGGGG GCGGCACTCCGGTAGAGGGGGGAACAGTCAGGCGATCGCGATGCACGCGC AGCAGCAAGGCGCGGGCGGGGCCGGCGGTGGTGGCGGTGGCGGGCGGACG GTGCCTAACCGTGGATATCAGAGCGATTTCCCTCCGCTGGGTTGA
back to top

Coding sequence (CDS) from alignment at L-digitata_M_contig10041:136..7280-

>mRNA_L-digitata_M_contig10041.1.1 ID=mRNA_L-digitata_M_contig10041.1.1|Name=mRNA_L-digitata_M_contig10041.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=1731bp|location=Sequence derived from alignment at L-digitata_M_contig10041:136..7280- (Laminaria digitata LdigPH10_18mv male)
GGTTTCGGCAGCGGTCGGGGTAGGCCTATTGCCGGCGGGGGCAAGGGCGG
CAACGGTGGCGGAGGCGGGGGAGGGAGAGGGGGGGGCGAGCGCGGGGGAA
GGGTAGGGGGGCTCCAGCAGGGCCCGGACGGTGATAGGGGTGACCTCGGT
GGGGGAGGCGGTGGCGGGCGGGGGAGGGGGGGAGAGCGCGCGGGGGGCAG
GACGGGGGGGGGGAGGGGAAGCCGAAGACCTCCCGTAAACGCGGGCGAGT
GGAAGGGGCAGAGAGGCATGCAGCGCAACCGCGTGGCCGAGAAATCGGAC
CCGGATTTCGTGCGGAACTACGACAACTACCGCCCGAGCTTCGCGCCTTA
CCGGCAGCTCGCGGACCCGGGGGGTGGTGGCGGGCACGGAGGGCATGGGG
GGCATGGGGGGCACGGGCAGCAGCCACAGCCGTCGCCGCGATTGCTCCAC
CAGCACCAGCAGCAGCAACAGCAACACCCAATGATGGCCGCCCCCGGACA
CCACGGACAGGCCCACGCGATGATGGCGATGCCGGCGGCGATGCAAGGTC
AACTCCGAGGCCAGATGCCGGGACAGCCGGGCGTTCTGGTCGTGCAACAG
CCACAGCAGCAGCAGCAGCAGCCGTGGCAGCAGCAGCAGCAGATGGAGGC
ACAGGCTATGGCTGCCGCCGCCGCCGCTGCTGCTGCAGGAGGAGGACCGG
CGACGTACGGCGCTCCCGTCCCAGGGCATGCGATTTACGCTCCGGGTTTC
ATAGACCCTGCGCAGGCGCAGGCGCAGGCACAGGCGCAGGCACAGGCGCA
AGCGCAAGCGGCGGCGGCAGCGGCAGCAGCGGCGGCGGCGGCAGCGGCGG
CGGCAGCTGCCGGGGCTACCGGTACGACCGGTAGCGCGGGGATAGGGGTA
CCTGCCCCTGGCGCGGCCGCGCCCACCATGCGTAGCCAGACACACCAACC
GCGGCAGCAGCGGCAGCAGCAGCAGCAACAGCAACAGCAGCAGCAGCAGC
TACAGCAGCAGCAGCTGCAGCAACAGCAGCAGCAGCAACGGCAGATGGCT
TATTTACACCCGCAACAGCAGCAGCAGCAGGCAGTGACTGCTGGGGTGCT
GCCAGCTCAGCCGGGCCAGCAGCAGCCGGGCCAGCAGCAGCAGCCGCAGC
AGCAGGCGCAGGCACAGGCGCAACAGCAGCAGACCCAACACCAGCAGCCA
CCGCAAGCAGGCCTGCTGCAGACGCCGCATATGCAGGCGGGCGTGGCTGT
GGCGGGCGGGTACATGACAGCGCAGGAGTACTACGGGGCGCACCAGCAAG
CGATATTTTACCAGGACCCTAACATGCCGGGCATGGCCATGGGCTATGGC
GTCCAACACGCACAGATTCCTCAGCAGCAGCAGCAGGCATACATTGTGCC
CGTTCAGCAACAGCAGCAGCAACAACAGCAGCAGCCGCAACAGCAACAGC
AGCAGCATCAGCAGCATCAGCATCACCCGTACCAACACCAGGTGTTTCCG
GTGGGAGCCATGCAGCAGCAACCGATGCCCCCCCAGCAGCAGCAGCAGCA
GCAGCACCGCCCTCAGCATCAGAGACACCACGGCAACAACCACCAGCACC
ACCAAAGTGGAGGAGGCGGTGGCGGGGGCGGGGGGCGGCACTCCGGCGCG
GGCGGGGCCGGCGGTGGTGGCGGTGGCGGGCGGACGGTGCCTAACCGTGG
ATATCAGAGCGATTTCCCTCCGCTGGGTTGA
back to top