mRNA_L-digitata_M_contig100355.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100355.1.1
Unique NamemRNA_L-digitata_M_contig100355.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A3D3VCW1_9PROT (EamA family transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D3VCW1_9PROT)

HSP 1 Score: 376 bits (966), Expect = 1.460e-128
Identity = 191/287 (66.55%), Postives = 231/287 (80.49%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSR 861
            LLFVLG  WG TFFFN IAI ELPPL +IL RV LA++ILW  V ASGI +P  R  W+AL IMAA+NSA+PFFLIAWGQIHI  GLASI+IAT+PLFAVV AH+ T DE ++PGK+ G+L+GL+GVV L+GP+ L D+G DL+GQLSVLGAA+CYA SAIYGR FA   +PP+ VATGQMTMATV+L+P TL+ D+PW     SL  WGA+  LAV+ST+ AYLI+FRILA AGA+NILLVNF+VPVSA+LLG+F+LGE LT+EQ+ G+  I +GL  IDGRL  R
Sbjct:    8 LLFVLGALWGGTFFFNAIAIPELPPLVVILCRVALATVILWFFVLASGIELPSDRSDWLALLIMAALNSALPFFLIAWGQIHIASGLASIMIATTPLFAVVAAHFMTEDERMSPGKVAGVLSGLVGVVVLIGPQFLEDLGKDLLGQLSVLGAAVCYALSAIYGRTFAKRDIPPMMVATGQMTMATVILLPITLLFDRPWDYLGASLEAWGAVAGLAVLSTSIAYLIFFRILARAGAVNILLVNFIVPVSAILLGVFILGELLTLEQLAGMVFIALGLALIDGRLFRR 294          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A2E7PH87_9PROT (EamA family transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PH87_9PROT)

HSP 1 Score: 374 bits (961), Expect = 1.110e-127
Identity = 189/287 (65.85%), Postives = 232/287 (80.84%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSR 861
            LLFVLG  WG TFFFN IAI ELPPL +IL RV LA++ILW  V A GI +PR R  W+AL IMAA+NSA+PFFLIAWGQIHI  GLASI+IA +PLFAVV AH+ T DE ++PGK+ G+LAGL+GVV L+GP+ L ++G DL+GQLSVLGAA+CYA SAIYGR F+   + P+ VATGQMTMAT++L+P TL+VD+PW     SL  WGA++ LAV+ST+ AYLI+FRILA AGA+NILLVNF+VP+SA+LLG+FVLGE LT+EQ+IG+  I +GL  IDGRL  R
Sbjct:   16 LLFVLGALWGGTFFFNAIAIPELPPLVVILCRVALATVILWFFVLAGGIKVPRGRSSWLALLIMAALNSALPFFLIAWGQIHIASGLASIMIAMTPLFAVVAAHFMTEDEHMSPGKVAGVLAGLVGVVVLIGPQFLEELGKDLLGQLSVLGAAVCYAVSAIYGRTFSRRAMAPMMVATGQMTMATLILLPITLLVDRPWEYLGASLEAWGAVVGLAVLSTSVAYLIFFRILARAGAVNILLVNFIVPISAILLGVFVLGELLTLEQLIGMVFIALGLALIDGRLFLR 302          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A2E8XU22_9PROT (EamA family transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XU22_9PROT)

HSP 1 Score: 348 bits (893), Expect = 2.300e-117
Identity = 178/287 (62.02%), Postives = 222/287 (77.35%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSR 861
            LL VLG  WG TFFFN +A+ E+PPL +IL RV +ASIILW +V A G+ +PR+  +W  L +MAA NSA+PFFLIAWGQ+HI  GLA+I+IAT+PL+AVV AH+WT DE +TPGK+ G+L G++GVVFL+GP +LG +        +V+GAAI YA SAIYGRRFA   V P+ VATGQ++M+TV+L+PF +    PW L NPS+  WGA++ LA++ST  AYLIYFRILA AGA+NILLVNFLVPVSAL+LGIFVLGE LT EQMIG+A I  GL  IDGR+  R
Sbjct:   16 LLVVLGTLWGGTFFFNAVALPEVPPLIVILSRVVIASIILWAIVLARGMVVPRNPRIWFDLTVMAASNSAVPFFLIAWGQLHIPSGLAAIMIATTPLYAVVAAHFWTDDEAMTPGKLTGVLLGIVGVVFLIGPGVLGALXXXXXXXXAVIGAAILYALSAIYGRRFAKQEVAPMVVATGQLSMSTVMLLPFAIHFAPPWELTNPSVAAWGALLGLAILSTAVAYLIYFRILATAGAVNILLVNFLVPVSALILGIFVLGEVLTAEQMIGMAFIAAGLALIDGRMFVR 302          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: UPI001D010217 (DMT family transporter n=1 Tax=Kinneretia sp. XES5 TaxID=2877940 RepID=UPI001D010217)

HSP 1 Score: 300 bits (768), Expect = 2.500e-98
Identity = 151/289 (52.25%), Postives = 205/289 (70.93%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQ 867
            LL VL   WG +F FN I + ELPP +I+  RVGLA+I LW++V  SG  +PRSRD W+A   M  +N+ IPF LI WGQ HI  GLASIL AT+PLFAV+ AH  T+DE +T  ++ G+L G +GV  ++GP +L D+G++++ QL+VLGAA  Y+ + I+GRRF   G+PPL  A GQ+T + +L++P  L+VD+PWTLA PS   W A++ LA+++T  AY+I+FRILA AGA N++LV FL+PVSA+LLG  VLGE L  +   G+A I +GL  IDGR+L  F 
Sbjct:   13 LLLVLSLLWGGSFLFNGILVRELPPFTIVTARVGLAAIALWVIVRLSGHAVPRSRDAWLAFFGMGVMNNIIPFSLIVWGQTHIASGLASILNATTPLFAVIVAHVLTQDEKMTGSRLAGVLVGFLGVALMIGPSVLSDLGTNVLAQLAVLGAAFSYSLAGIFGRRFRRMGLPPLLPAAGQVTASALLMLPVALVVDRPWTLAMPSAEAWAALLGLALLATALAYVIFFRILATAGATNLMLVTFLIPVSAILLGALVLGEVLAPKHFAGMALIALGLAAIDGRVLKMFS 301          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A372NI88_9HYPH (DMT family transporter n=4 Tax=Shinella TaxID=323620 RepID=A0A372NI88_9HYPH)

HSP 1 Score: 299 bits (766), Expect = 3.980e-98
Identity = 152/288 (52.78%), Postives = 203/288 (70.49%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRF 864
            LL  L   WG +F FN I + ELPPL+I+  RV LA+I LW +V  SG  +PRSR+VW+A   M  +N+ IPF LI WGQ HI  GLASIL AT+PLFAV+ AH  T DE +T G+++G+L G  GV  ++GP +L D+G++++ QL+VLGAA+ YA + I+GRRF   G+PPL  A GQ+T + ++++P  L+VD+PWTLA PS   W A+  LAV++T  AY+I+FRILA AGA N++LV FL+PVSA+LLG  VLGE L  +   G+A I VGL  IDGR+   F
Sbjct:    8 LLIALSALWGGSFLFNGILVRELPPLTIVAARVALAAIALWTIVRLSGHAVPRSREVWLAFLGMGVLNNVIPFSLIVWGQTHIASGLASILNATTPLFAVIVAHVLTEDEKMTGGRLVGVLVGFAGVALMIGPSVLSDLGTNVLAQLAVLGAAVSYAFAGIWGRRFRRMGLPPLLPAAGQVTASALIMLPVALVVDRPWTLAMPSHEAWLALFGLAVLATALAYVIFFRILATAGATNLMLVTFLIPVSAILLGALVLGEVLAPKHFAGMALIAVGLAAIDGRVFKMF 295          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: UPI001FEF615B (EamA family transporter n=2 Tax=Agrobacterium sp. AGB01 TaxID=2769302 RepID=UPI001FEF615B)

HSP 1 Score: 298 bits (763), Expect = 1.290e-97
Identity = 152/292 (52.05%), Postives = 204/292 (69.86%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQLTG 876
            +L  L   WG +FFF  +A+ ELPPL+I+  RVGLA+I L IV    G+ +PR   +W A   M  +N+ IPF LI WGQ HI  G+ASIL AT+PLF V+ AH+ T DE L+P K+ G+L G +GV  ++GP  LG  GS+L GQL++LGAA  YA + I+GRRF T GV PL  ATGQ++ +T++L+P  L++DQPWTLA PS   WGA++ +A++ST  AYL++FRIL+ AGA N+ LV FL+PVSA+LLG   LGE L ++  +G+A I  GL+ IDGRLL R +  G
Sbjct:   15 MLIALSVLWGGSFFFIGVAVKELPPLTIVTLRVGLAAIALLIVCRVMGLKLPREGRIWRAFFAMGILNNIIPFCLIVWGQTHIASGVASILNATTPLFTVIVAHFLTVDEKLSPNKLTGVLIGFVGVATMIGPSALGGSGSNLWGQLAILGAATSYAFAGIFGRRFKTMGVAPLMTATGQISSSTLMLIPVALLIDQPWTLAMPSAATWGALLGIALLSTALAYLLFFRILSTAGATNLALVTFLIPVSAILLGSLFLGEQLEMKHFVGMAMIAAGLIAIDGRLLRRLKAAG 306          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A2E3XBU6_9PROT (EamA family transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3XBU6_9PROT)

HSP 1 Score: 296 bits (759), Expect = 4.290e-97
Identity = 151/290 (52.07%), Postives = 208/290 (71.72%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQL 870
            LL +L  FWG +F F  IA+ +  P +I   RV +AS+ILW  +  S I IP++  +W +  IM  INSAIPF LIAWGQ +I  GLASILIAT+PL  V+GAH++T DE +T  ++IGIL G +GV+ LLGP+LLG IG +L GQL+++ AAI YA S+IYGRR++   +PPL +A GQ+T + ++L P  +++DQPW  +  S   W AIISL V ST  AYLIYFRILA AGA N++LVNFLVP++A+ LGI VLGE+++++ ++G+  I +GL  IDGRL  + ++
Sbjct:    8 LLIILSIFWGGSFLFVGIAVEDFQPFTIAFLRVLIASLILWXAIIISSIKIPKTASIWCSFFIMGTINSAIPFSLIAWGQSNIPSGLASILIATTPLITVIGAHFYTTDEKITANRLIGILMGFVGVIVLLGPDLLGQIGRNLFGQLAIISAAILYALSSIYGRRYSKQKIPPLVIAAGQVTTSAIILFPTVILIDQPWLHSPASNXSWAAIISLGVFSTAIAYLIYFRILATAGATNLMLVNFLVPITAIFLGIMVLGESISLQNILGMFFIGIGLTLIDGRLNKKIKI 297          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A1A9FWW8_SHIS7 (ABC transporter permease n=8 Tax=Shinella TaxID=323620 RepID=A0A1A9FWW8_SHIS7)

HSP 1 Score: 296 bits (757), Expect = 1.320e-96
Identity = 151/285 (52.98%), Postives = 203/285 (71.23%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLL 855
            LL  L   WG +F FN I + ELP L+I+  RV LA++ LW VV  +G  +PRSR+VW+A   M  +N+ IPF LI WGQ HI  GLASIL AT+PLFAV+ AH  T+DE +T G+++G+L G +GV  ++GP +L D+G++L+ QL+VLG A+ Y+ + I+GRRF   G+PPL  A GQ+T + VL++P  L+VD+PWTLA PS+  W A+  LA ++T  AY+I+FRILA AGA N++LV FL+PVSA+LLG  VLGE L  +   G+A I VGL  IDGRLL
Sbjct:   13 LLIALSLLWGGSFLFNGILVRELPTLTIVAARVALAALALWTVVRLAGHAVPRSREVWLAFLGMGVLNNIIPFSLIVWGQTHIASGLASILNATTPLFAVIAAHLLTKDEKMTGGRLVGVLVGFLGVALMIGPSVLSDLGANLLAQLAVLGGAVSYSIAGIFGRRFHRMGLPPLLPAAGQVTASAVLMLPVALVVDRPWTLAMPSVETWMALFGLAFLATALAYVIFFRILATAGATNLMLVTFLIPVSAILLGALVLGEVLAPKHFAGMALIAVGLAAIDGRLL 297          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A086MCG2_9HYPH (ABC transporter permease n=1 Tax=Microvirga sp. BSC39 TaxID=1549810 RepID=A0A086MCG2_9HYPH)

HSP 1 Score: 295 bits (754), Expect = 4.430e-96
Identity = 147/289 (50.87%), Postives = 209/289 (72.32%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQ 867
            +L  L   WG +FFF  +A+ ELPP +I++ RVGLA++IL IV+   G+ IP  + VW+A   M  +N+AIPF LI WGQ HI  GLASIL AT+PL  V+ AH+ T+DE +T  +++G+L GL+GVV ++GPE+L  +G++++ QL+VLGAA+ YA + +YGRRF   GV P+  ATGQ+T +T++L+P  ++ +QPW L  PSLP WGA+I +A +ST  AY++YFRILA AGA N+LLV FL+P+SA++LG  VLGE L  +  +G+A I +GL  IDGRL+   +
Sbjct:   15 MLVTLSVLWGGSFFFTGVAVKELPPFTIVVLRVGLAALILNIVIRTIGLRIPGDKRVWIAFFGMGLLNNAIPFPLIVWGQSHIASGLASILNATTPLSTVIVAHFLTQDEKMTGNRLVGVLIGLVGVVVMIGPEVLTGLGTNVLAQLAVLGAALSYAFAGVYGRRFKQMGVAPMVTATGQVTASTIILIPVAVLFEQPWQLPMPSLPAWGALIGIAALSTALAYILYFRILATAGATNLLLVTFLIPISAIILGSAVLGERLDPKHFLGMALIGLGLAAIDGRLIKLLR 303          
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Match: A0A3S2V977_9HYPH (DMT family transporter n=1 Tax=Methylobacterium oryzihabitans TaxID=2499852 RepID=A0A3S2V977_9HYPH)

HSP 1 Score: 293 bits (749), Expect = 1.830e-95
Identity = 153/289 (52.94%), Postives = 205/289 (70.93%), Query Frame = 1
Query:    1 LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGITIPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAVVGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVLGAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWTLANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSALLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQ 867
            +L VL   WG +FFF+ +A+  LPP+++++ RVGLA+++L +VV ASG  +PR R VWVA   M  +N+A+PF LI WGQ HI  GLA+IL AT+PL  VV AH  TRDE +T  ++ G+L GL GVV ++GP +L  +G+ L  QL+VL A + YA + ++GRRF   GV PL  A GQ+T +T++LVP  L+VD+PWTL  P LPVWGA+  LA++ST  AY++YFRILA AGA N+LLV FL+PVSA+LLG   LGE L     +G+A I  GL  IDGRLL+R +
Sbjct:   13 MLLVLSVLWGGSFFFSGVALAALPPVTLVVLRVGLAALLLNLVVVASGARMPRDRRVWVAFLGMGLLNNAVPFCLIVWGQTHIASGLAAILNATTPLSGVVVAHCLTRDERMTGNRLAGVLVGLAGVVVMVGPSVLAGVGAALPAQLAVLAATVSYAFAGVFGRRFRRMGVAPLATAAGQVTASTLMLVPVALLVDRPWTLPVPGLPVWGAVAGLAILSTALAYVLYFRILATAGATNLLLVTFLIPVSAILLGTLGLGERLDPRHYLGMALIGCGLAAIDGRLLARVR 301          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100355.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D3VCW1_9PROT1.460e-12866.55EamA family transporter n=1 Tax=Rhodospirillaceae ... [more]
A0A2E7PH87_9PROT1.110e-12765.85EamA family transporter n=1 Tax=Rhodospirillaceae ... [more]
A0A2E8XU22_9PROT2.300e-11762.02EamA family transporter n=1 Tax=Alphaproteobacteri... [more]
UPI001D0102172.500e-9852.25DMT family transporter n=1 Tax=Kinneretia sp. XES5... [more]
A0A372NI88_9HYPH3.980e-9852.78DMT family transporter n=4 Tax=Shinella TaxID=3236... [more]
UPI001FEF615B1.290e-9752.05EamA family transporter n=2 Tax=Agrobacterium sp. ... [more]
A0A2E3XBU6_9PROT4.290e-9752.07EamA family transporter n=1 Tax=Rhodospirillaceae ... [more]
A0A1A9FWW8_SHIS71.320e-9652.98ABC transporter permease n=8 Tax=Shinella TaxID=32... [more]
A0A086MCG2_9HYPH4.430e-9650.87ABC transporter permease n=1 Tax=Microvirga sp. BS... [more]
A0A3S2V977_9HYPH1.830e-9552.94DMT family transporter n=1 Tax=Methylobacterium or... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100355contigL-digitata_M_contig100355:2..880 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop1
Start0
Seed ortholog1410620.SHLA_3c001580
PFAMsEamA
Model size879
Max annot lvl28211|Alphaproteobacteria
Hectar predicted targeting categorysignal anchor
Exons1
Evalue1.01e-97
EggNOG OGsCOG0697@1|root,COG0697@2|Bacteria,1MZQM@1224|Proteobacteria,2TUPG@28211|Alphaproteobacteria,4B737@82115|Rhizobiaceae
DescriptionPermeases of the drug metabolite transporter (DMT) superfamily
Cds size879
COG categoryEG
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406606.375762-CDS-L-digitata_M_contig100355:1..8801682406606.375762-CDS-L-digitata_M_contig100355:1..880Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100355 2..880 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100355.1.1prot_L-digitata_M_contig100355.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100355 2..880 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100355.1.1

>prot_L-digitata_M_contig100355.1.1 ID=prot_L-digitata_M_contig100355.1.1|Name=mRNA_L-digitata_M_contig100355.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=293bp
LLFVLGGFWGCTFFFNEIAILELPPLSIILFRVGLASIILWIVVFASGIT
IPRSRDVWVALGIMAAINSAIPFFLIAWGQIHITGGLASILIATSPLFAV
VGAHYWTRDEGLTPGKIIGILAGLIGVVFLLGPELLGDIGSDLIGQLSVL
GAAICYAGSAIYGRRFATFGVPPLFVATGQMTMATVLLVPFTLIVDQPWT
LANPSLPVWGAIISLAVVSTTFAYLIYFRILANAGAINILLVNFLVPVSA
LLLGIFVLGETLTIEQMIGLACIVVGLVTIDGRLLSRFQLTG*
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mRNA from alignment at L-digitata_M_contig100355:2..880+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100355.1.1 ID=mRNA_L-digitata_M_contig100355.1.1|Name=mRNA_L-digitata_M_contig100355.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=879bp|location=Sequence derived from alignment at L-digitata_M_contig100355:2..880+ (Laminaria digitata LdigPH10_18mv male)
TTGTTGTTCGTTCTTGGTGGCTTTTGGGGCTGCACGTTCTTTTTCAATGA AATCGCGATTCTGGAACTTCCGCCACTCTCCATCATTTTGTTTCGGGTCG GGCTGGCATCAATCATCCTCTGGATTGTCGTGTTCGCGAGCGGCATCACC ATTCCGCGCAGCCGGGACGTCTGGGTTGCACTGGGCATCATGGCCGCAAT CAACTCGGCGATTCCCTTCTTTCTCATCGCCTGGGGGCAGATCCATATCA CCGGTGGACTGGCCTCGATCCTGATCGCGACCTCGCCGCTTTTTGCCGTG GTGGGCGCACACTACTGGACGCGGGACGAGGGACTGACGCCGGGCAAGAT AATCGGGATTCTCGCCGGCTTGATCGGCGTGGTGTTTCTTCTGGGCCCCG AGCTGCTGGGGGATATTGGCAGCGATTTGATCGGACAGCTTTCGGTTCTG GGGGCTGCGATCTGTTATGCCGGATCGGCGATCTATGGACGGCGGTTCGC GACATTTGGCGTGCCGCCCCTGTTCGTGGCGACCGGTCAGATGACGATGG CAACAGTTCTGCTGGTGCCGTTTACGCTGATTGTCGATCAGCCATGGACC CTGGCAAATCCGAGCCTCCCTGTCTGGGGGGCCATCATAAGTCTTGCCGT TGTTTCGACGACCTTTGCCTATCTGATCTATTTCCGCATTCTGGCCAATG CGGGTGCGATCAATATTCTTCTGGTGAACTTTCTGGTGCCGGTCAGTGCT TTGCTGCTCGGTATATTCGTACTGGGAGAAACGCTGACTATCGAGCAAAT GATCGGTTTGGCGTGTATTGTGGTCGGGCTTGTGACGATTGACGGTCGAT TGTTAAGCCGGTTTCAGCTGACAGGGTAG
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Coding sequence (CDS) from alignment at L-digitata_M_contig100355:2..880+

>mRNA_L-digitata_M_contig100355.1.1 ID=mRNA_L-digitata_M_contig100355.1.1|Name=mRNA_L-digitata_M_contig100355.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=879bp|location=Sequence derived from alignment at L-digitata_M_contig100355:2..880+ (Laminaria digitata LdigPH10_18mv male)
TTGTTGTTCGTTCTTGGTGGCTTTTGGGGCTGCACGTTCTTTTTCAATGA
AATCGCGATTCTGGAACTTCCGCCACTCTCCATCATTTTGTTTCGGGTCG
GGCTGGCATCAATCATCCTCTGGATTGTCGTGTTCGCGAGCGGCATCACC
ATTCCGCGCAGCCGGGACGTCTGGGTTGCACTGGGCATCATGGCCGCAAT
CAACTCGGCGATTCCCTTCTTTCTCATCGCCTGGGGGCAGATCCATATCA
CCGGTGGACTGGCCTCGATCCTGATCGCGACCTCGCCGCTTTTTGCCGTG
GTGGGCGCACACTACTGGACGCGGGACGAGGGACTGACGCCGGGCAAGAT
AATCGGGATTCTCGCCGGCTTGATCGGCGTGGTGTTTCTTCTGGGCCCCG
AGCTGCTGGGGGATATTGGCAGCGATTTGATCGGACAGCTTTCGGTTCTG
GGGGCTGCGATCTGTTATGCCGGATCGGCGATCTATGGACGGCGGTTCGC
GACATTTGGCGTGCCGCCCCTGTTCGTGGCGACCGGTCAGATGACGATGG
CAACAGTTCTGCTGGTGCCGTTTACGCTGATTGTCGATCAGCCATGGACC
CTGGCAAATCCGAGCCTCCCTGTCTGGGGGGCCATCATAAGTCTTGCCGT
TGTTTCGACGACCTTTGCCTATCTGATCTATTTCCGCATTCTGGCCAATG
CGGGTGCGATCAATATTCTTCTGGTGAACTTTCTGGTGCCGGTCAGTGCT
TTGCTGCTCGGTATATTCGTACTGGGAGAAACGCTGACTATCGAGCAAAT
GATCGGTTTGGCGTGTATTGTGGTCGGGCTTGTGACGATTGACGGTCGAT
TGTTAAGCCGGTTTCAGCTGACAGGGTAG
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