mRNA_L-digitata_M_contig100298.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100298.1.1
Unique NamemRNA_L-digitata_M_contig100298.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A2E8XP90_9PROT (TIGR02302 family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XP90_9PROT)

HSP 1 Score: 421 bits (1083), Expect = 5.900e-139
Identity = 207/309 (66.99%), Postives = 252/309 (81.55%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELL 927
            G  LG W I++ PD  PEIRF E+PAA ESN+L+LSYE  DD+G+    A I+WP  P  TGI PV++ELP PRPDPR+GSA SVHDLT+HPWAGLEVD++LT  DGRGQ   TDRL+V LPER+FNHPVA+EII QRRVLALSPENR DVARSL  +G  P RF+ND+ VFL+LMTARSR+ ++   + +  +LS LWDTALRLEDG+LSL QR +  LQ +LREA+ENGA +EE+ ++M ELR ALDRYLEALAQNLSQALEGMDLS+LPEAGEDL+++D  A+++L++QLEQMARLGDTEG Q+LL
Sbjct:  280 GQTLGEWTIEVTPDHVPEIRFVESPAATESNTLQLSYESTDDHGITAVTANITWPGDPDRTGIGPVEIELPQPRPDPRDGSAVSVHDLTAHPWAGLEVDIQLTATDGRGQAGRTDRLAVFLPERTFNHPVAREIIEQRRVLALSPENRRDVARSLDGIGAVPQRFDNDIVVFLALMTARSRMIHENADHSVEPILSQLWDTALRLEDGALSLTQRRLAELQRELREAIENGASDEEIQELMAELRTALDRYLEALAQNLSQALEGMDLSSLPEAGEDLDVIDREAMEQLLQQLEQMARLGDTEGAQQLL 588          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A2E7PIF9_9PROT (Uncharacterized protein n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E7PIF9_9PROT)

HSP 1 Score: 356 bits (914), Expect = 1.230e-113
Identity = 175/300 (58.33%), Postives = 231/300 (77.00%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLG 900
            G+I+G WDI ++ D  PEI F E P    +N+L++SY+  DDYG+V   A+I+WP   +   + P  +ELPLP P+PR GS  SV  LT+HPWAGLEVD+ LT  DGRGQT  TDRL+V+LPE+ FNHPVA++II QRR LALSP +R +VAR+LHNL   P RF ND+ VFL+L++ARSRL + Q +  +  +LS LWDTALRLEDG+LS  QR + RLQ++LR+A+ENGA ++EV +++E+LRAALD+YLEAL QNLSQALEGMDL +LPE  +  EL+DS AIQ+++E++E+MARLG
Sbjct:  294 GDIIGAWDITVLADGPPEINFVETPRGTPTNTLQISYDVADDYGIVGIAAEITWPGVSENPALAPSAIELPLPSPNPRAGSTVSVQGLTAHPWAGLEVDIRLTATDGRGQTGHTDRLAVLLPEQGFNHPVARDIIEQRRELALSPNSRREVARALHNLSNSPRRFENDVVVFLALVSARSRLVHMQATGNVTPILSQLWDTALRLEDGALSFTQRSLARLQKELRKAIENGASDDEVRELLEKLRAALDQYLEALMQNLSQALEGMDLLSLPEGVDVTELVDSEAIQDMLEKIERMARLG 593          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A848WBA7_9PROT (TIGR02302 family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A848WBA7_9PROT)

HSP 1 Score: 306 bits (784), Expect = 2.080e-94
Identity = 158/309 (51.13%), Postives = 214/309 (69.26%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELL 927
            G  LG W   I  D APEI FA+ P  +  +SLR++Y  LDDYGVV   A+I  P    T G +P+ ++LP P  +PR+G   S  DLT+HPWAGL+V V+L   DG GQ   +DRLSV LPER FNHPVA+ IIAQRR L+L+   R+ +AR LH +   PD++ ND  VFL LM+ARSRL +  +++ I SV  LLW+TALR+EDG+LSLA+RD+   Q++L+EAL   A E E+AQ+MEELR ALDR+L+ALA+NL Q L+ +D + LP+A  +   +D+  +Q+++++LEQ AR GD E  Q+LL
Sbjct:  297 GKTLGSWAFDIAQDQAPEITFADPPEVSRRSSLRIAYRTLDDYGVVSVHAEIFGPSGAGTIGSKPLTVDLPPPIGNPRDGEGASFSDLTAHPWAGLDVSVQLVATDGPGQEGRSDRLSVKLPERVFNHPVARAIIAQRRALSLASNQRLRIARELHGIAARPDQYGNDTTVFLGLMSARSRLVHNGEADAIESVQLLLWETALRVEDGTLSLAERDLREAQQRLQEALTRDADETEIAQLMEELREALDRFLQALAENLQQQLQNLDTANLPQADPN-NTIDNETLQQILDELEQRARSGDREAAQQLL 604          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: UPI0006850D47 (TIGR02302 family protein n=1 Tax=Azospirillum halopraeferens TaxID=34010 RepID=UPI0006850D47)

HSP 1 Score: 254 bits (648), Expect = 2.110e-74
Identity = 133/304 (43.75%), Postives = 196/304 (64.47%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGV--VETRAQISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALE-GMDLSTLP-EAGEDLELLDSAAIQELMEQLEQMARLG 900
            G  LG W I+++ D+ P I FA  PA +E  +LR+ Y   DDYG+  V    +++  D P+T G EP++L LPLP  +P+     + HDLT HPWAGL V + LT  DG  QT  T+  +++LPER FNHP+A+ I+ QR+ L L P  R  VA  L +L   P R+ +DL VFL+L TA +RL    D   +  V  LLW+TALR+EDG LSLA+RD+   + +L EAL+  A +EE+ Q+M++L+ A DR++EA+A+NL QALE G ++  +P E  +++  ++ A +QE+M+++ +MA  G
Sbjct:  298 GGTLGSWAIEVIADSPPAIEFAAPPARSERGALRIEYAARDDYGIAAVSATVRLAPEDLPETVGREPLELPLPLPGINPKEARQAAFHDLTDHPWAGLPVTLRLTAVDGAAQTGETEDFAMVLPERVFNHPIARAIVEQRKRLTLEPGAREPVAEILADLSAIPARYGHDLVVFLALRTAAARLMLDADDAAVTGVQRLLWETALRIEDGGLSLAERDLRDAERRLAEALDRNASDEEIRQLMDQLQEAFDRFMEAMAENLRQALERGEEVPMIPPEMAQNM--MNQADLQEMMDRMREMAETG 599          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: G8ARR4_9PROT (Uncharacterized protein n=30 Tax=Azospirillaceae TaxID=2829815 RepID=G8ARR4_9PROT)

HSP 1 Score: 248 bits (632), Expect = 4.930e-72
Identity = 131/314 (41.72%), Postives = 201/314 (64.01%), Query Frame = 1
Query:    4 NILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPK----TTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPEN-RIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALE-GMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELL 927
            N+LG W+++I+PD  P I +A  P   E  +LRL Y   DDYG+ E +A +   D P+         P++L L LP   PR     + HDLT+HPWAGL V + L+  DG GQT +T+ ++++LPER FNHPVA+ I+ +R+ L L P+  RI+VAR+L  +   P +F  DL  FL++ TA +RL   ++   + +V  LLW+TALR+EDG LSLA+RD+   + +L EALE GA ++E+ ++M+EL+AALD++L+A+ Q + +ALE G  +  +P    D +++D   +Q +MEQ+ QMA  G  +  +++L
Sbjct:  298 NLLGGWNVRIIPDNPPTIAYASPPTKGERGALRLDYTAQDDYGLAEAKAVVRL-DLPEGEAPALDRSPLELPLALPGVRPREARNAAFHDLTAHPWAGLNVTIRLSALDGAGQTGSTEDVAMVLPERVFNHPVARAIVEERKKLTLRPQQLRIEVARALAEISSRPSQFGGDLVAFLAMRTAVNRLLLDEEGASVPAVQQLLWETALRIEDGGLSLAERDLRDAESRLAEALERGADDQELKKLMDELQAALDKFLDAMEQQMREALERGEQIPMVPPEMAD-QMMDRQDLQRMMEQMRQMAETGARDAARQML 609          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A3S1CGB6_9PROT (TIGR02302 family protein n=1 Tax=Azospirillum doebereinerae TaxID=92933 RepID=A0A3S1CGB6_9PROT)

HSP 1 Score: 245 bits (625), Expect = 5.770e-71
Identity = 134/331 (40.48%), Postives = 204/331 (61.63%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIE----------------PVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSP-ENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALE-GMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELLERMQ 939
            G  LG W ++++PD+AP +  A  PAA E  +LRL Y   DDYG+ E +AQ+  P  P                      P++L L LP   P+    ++ HDLT+HPWAGL V V L   DG GQT  ++  ++ LPER FNHPVA+ I+AQR++L   P E+R+DVAR+L  L   P +F  DL VFL+L T+ +RL        I ++  LLW+TALR+EDG LSLA+RD+   + +L EAL+ GA + E+ Q+M+EL+AALD++++A+ Q + +AL+ G  + T+P    D ++ D   +Q++M+++ +MA+ G  +  +++L +MQ
Sbjct:  293 GRTLGSWPVRVVPDSAPIVAHANPPAAGERGALRLDYTARDDYGLTEVKAQVR-PAAPSXXXXXXXXXXXLLAAALRDAPPLELPLALPGLRPKEARNSAFHDLTAHPWAGLPVTVRLIATDGAGQTGQSEDAAITLPERVFNHPVARAIVAQRKILTQRPVESRVDVARALAELSTRPGQFGQDLVVFLALRTSVARLMLDDSEASIPALQQLLWETALRIEDGGLSLAERDLRDAERRLSEALDKGATDAELNQLMDELQAALDKFMDAMEQRMMEALQRGEQIPTVPPEMAD-QMTDRNDLQQMMDRMREMAQTGSRDAARQMLSQMQ 621          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: W9GX50_9PROT (Uncharacterized protein n=1 Tax=Skermanella stibiiresistens SB22 TaxID=1385369 RepID=W9GX50_9PROT)

HSP 1 Score: 240 bits (612), Expect = 4.320e-69
Identity = 128/317 (40.38%), Postives = 201/317 (63.41%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIE--PVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPE-NRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLSTLPEAGEDLE--LLDSAAIQELMEQLEQMARLGDTEGVQELLERM 936
            G  LG W I ++PDTAP I     PAA E  +LRL YE  DDYGVV  +  +         G +  P++L+LPLP   P+     S HDL  HPWAGL V + L+  DG GQT TT+ ++++LPER F HPVA+ II +R+ L L P+  R +VARSL  +   P +F +D+ VFLSL  A +RL   + ++ + +V  LLWDTALR+EDG+LS+A+R++   +++L +AL   AP++E+ ++M+EL++AL+ +L+A+ + + QA+E  +    PE   +++   +D   +Q++++Q+ QMA  G  +  +E+L ++
Sbjct:  300 GRSLGSWPITVVPDTAPIIALPTPPAAAERGALRLEYEARDDYGVVNVQGTVRLDGASAEPGFDRAPIELQLPLPGVRPKTARGASFHDLAPHPWAGLPVTLRLSATDGAGQTGTTEDVALVLPEREFQHPVARAIIEERKKLTLRPQAGREEVARSLGIISARPFQFRDDVVVFLSLRAAVARLYLDETNDAVPAVQQLLWDTALRVEDGTLSIAERNLRDAEQRLMDALNQDAPDQELQRLMDELQSALNEFLDAMEEQMRQAMERGEQP--PEIPPEMQGQTMDRQDLQQMLDQMRQMAETGSRDAAREMLSQL 614          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A512E0L5_9PROT (Uncharacterized protein n=1 Tax=Skermanella aerolata TaxID=393310 RepID=A0A512E0L5_9PROT)

HSP 1 Score: 236 bits (603), Expect = 7.180e-68
Identity = 128/314 (40.76%), Postives = 199/314 (63.38%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIE--PVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPEN-RIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLSTLPEAGEDL--ELLDSAAIQELMEQLEQMARLGDTEGVQELL 927
            G  LG W + ++PDTAP I     P+A E  +LRL YE  DDYG+V     +         GI+  PV+L+LPLP   P+   +TS HDLT HPWAGL V + L+  DG GQT  T+ ++++LPER F +PVA+ II +R+ L L P+  R D ARSL  +   P +F++D+ VFLSL +A +RL   +  + + +V  LLWDTALR+EDG LSLA+R++   +++L +AL   AP++EV ++M+EL+ AL+ +L+A+ + + QA+E  +    P+   ++  + +D   IQ++++Q+ QMA  G  +  +++L
Sbjct:  286 GRALGSWPVTVVPDTAPIIALPAPPSAGERGALRLEYEARDDYGIVAVTGTVRLSGDVAEPGIDRMPVELQLPLPGVRPKTARSTSFHDLTPHPWAGLLVTLRLSATDGAGQTGMTEDVALVLPEREFQNPVARAIIEERKKLTLRPQTGREDAARSLGIISARPYQFHDDIVVFLSLRSAVARLYLDETPDAVPAVQKLLWDTALRVEDGELSLAERNLRDAEQRLTDALNRDAPDQEVQKLMDELQQALNEFLDAMEEQMRQAMERGEQP--PQIPPEMMGQTMDRQDIQKMLDQMRQMAETGSRDAAKQML 597          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: A0A418VSB8_9PROT (TIGR02302 family protein n=1 Tax=Azospirillum cavernae TaxID=2320860 RepID=A0A418VSB8_9PROT)

HSP 1 Score: 234 bits (598), Expect = 3.950e-67
Identity = 131/323 (40.56%), Postives = 199/323 (61.61%), Query Frame = 1
Query:    1 GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIE-------PVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPEN-RIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQ-DSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALE-GMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELLERMQ 939
            G +LG W ++++PD  P+I  A  PAA E  +LRL Y   DDYG+ E +A+I    RP   G         P+DL L LP   P+    +  HDLT+HPWAGL V V L   DG GQT  +D   +ILPER+FNHPVA+ II QR+ L   P+  R +VAR+L  +   P ++ +DL  FL+L  A +RL   + D+  + +V +LLW+TALR+EDG LSLA+RD+   + +L EAL+ GA + ++ Q+M+EL+AALD ++ A+ Q +  AL+ G  + T+P    D  + D   +Q++++++ +MA+ G  +  +++L  +Q
Sbjct:  299 GRLLGSWPVRVVPDLPPQIAHASPPAAGERGALRLDYAARDDYGLAEVKARI----RPMPDGQTGDVADGAPLDLPLALPGLRPKEARNSGFHDLTAHPWAGLPVAVRLIATDGGGQTGQSDESPLILPERTFNHPVARAIIEQRKTLTRRPQAARTEVARALAEISARPSQYGHDLVAFLALRAAVARLMLDRVDAAAVPAVQALLWETALRVEDGGLSLAERDLREAERRLSEALDKGASDADLNQLMDELQAALDAFMNAMEQRMMDALQRGEQVPTIPPELAD-RMTDRNDLQQMLDRMREMAQTGSRDAARQMLSELQ 616          
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Match: UPI0013C333FE (TIGR02302 family protein n=1 Tax=Algihabitans albus TaxID=2164067 RepID=UPI0013C333FE)

HSP 1 Score: 234 bits (596), Expect = 4.330e-67
Identity = 130/310 (41.94%), Postives = 180/310 (58.06%), Query Frame = 1
Query:   10 LGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRAQISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDVELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRIDVARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWDTALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDRYLEALAQNLSQALEGMDLST-LPEAGEDLELLDSAAIQELMEQLEQMARLGDTEGVQELLERM 936
            L +W IQ+ PDT P + +   P+A +  +L L Y   DDYG+ +  A I   D P     EP++LEL LP   PRN    S HDL+ HPWAG+EV + L   D   Q  TT+    +LP+R FNHPVA+E++  RR L L+P+ +  V   L  +   P  F  D  V L++  A  RL Y +    + SV +LLWDTALRLEDG LSLA+RD+  LQ QL+EAL  GAP+EE+ ++ + L+ ALDR+LEALA+     L   D      E   D ++L     Q ++EQ+ +MA+ G  E  Q++LE +
Sbjct:  290 LMQWPIQVTPDTPPVVEYTAPPSATQRGALALEYLASDDYGLSDMTAVIRRIDAPDA---EPLELELILPTVAPRNAEGASFHDLSPHPWAGIEVTITLVASDAIDQIGTTEAFQTVLPQRIFNHPVARELVELRRQLTLAPDAKAPVIARLGEITEQPAHFFFDAVVGLAISLAERRLMYDRSDGAVTSVQNLLWDTALRLEDGELSLAERDLRELQRQLQEALAEGAPDEEIERLTDALQEALDRFLEALAEQALDELRNADGEIEADELPPDAQILRREDFQRMLEQMREMAQSGAREQAQQMLENL 596          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100298.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E8XP90_9PROT5.900e-13966.99TIGR02302 family protein n=1 Tax=Alphaproteobacter... [more]
A0A2E7PIF9_9PROT1.230e-11358.33Uncharacterized protein n=1 Tax=Rhodospirillaceae ... [more]
A0A848WBA7_9PROT2.080e-9451.13TIGR02302 family protein n=1 Tax=Alphaproteobacter... [more]
UPI0006850D472.110e-7443.75TIGR02302 family protein n=1 Tax=Azospirillum halo... [more]
G8ARR4_9PROT4.930e-7241.72Uncharacterized protein n=30 Tax=Azospirillaceae T... [more]
A0A3S1CGB6_9PROT5.770e-7140.48TIGR02302 family protein n=1 Tax=Azospirillum doeb... [more]
W9GX50_9PROT4.320e-6940.38Uncharacterized protein n=1 Tax=Skermanella stibii... [more]
A0A512E0L5_9PROT7.180e-6840.76Uncharacterized protein n=1 Tax=Skermanella aerola... [more]
A0A418VSB8_9PROT3.950e-6740.56TIGR02302 family protein n=1 Tax=Azospirillum cave... [more]
UPI0013C333FE4.330e-6741.94TIGR02302 family protein n=1 Tax=Algihabitans albu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100298contigL-digitata_M_contig100298:1..942 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1121033.AUCF01000001_gene2034
PFAMsDUF4175
Model size942
Max annot lvl204441|Rhodospirillales
Hectar predicted targeting categoryother localisation
Exons1
Evalue3.46e-75
EggNOG OGsCOG1511@1|root,COG1511@2|Bacteria,1QY7Q@1224|Proteobacteria,2TXIQ@28211|Alphaproteobacteria,2JYUQ@204441|Rhodospirillales
DescriptionDomain of unknown function (DUF4175)
Cds size942
COG categoryS
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406605.7346234-CDS-L-digitata_M_contig100298:0..9421682406605.7346234-CDS-L-digitata_M_contig100298:0..942Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100298 1..942 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100298.1.1prot_L-digitata_M_contig100298.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100298 1..942 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100298.1.1

>prot_L-digitata_M_contig100298.1.1 ID=prot_L-digitata_M_contig100298.1.1|Name=mRNA_L-digitata_M_contig100298.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=314bp
GNILGRWDIQIMPDTAPEIRFAEAPAANESNSLRLSYEGLDDYGVVETRA
QISWPDRPKTTGIEPVDLELPLPRPDPRNGSATSVHDLTSHPWAGLEVDV
ELTIHDGRGQTSTTDRLSVILPERSFNHPVAKEIIAQRRVLALSPENRID
VARSLHNLGRFPDRFNNDLAVFLSLMTARSRLTYQQDSNGIISVLSLLWD
TALRLEDGSLSLAQRDVDRLQEQLREALENGAPEEEVAQIMEELRAALDR
YLEALAQNLSQALEGMDLSTLPEAGEDLELLDSAAIQELMEQLEQMARLG
DTEGVQELLERMQQ
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mRNA from alignment at L-digitata_M_contig100298:1..942-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100298.1.1 ID=mRNA_L-digitata_M_contig100298.1.1|Name=mRNA_L-digitata_M_contig100298.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=942bp|location=Sequence derived from alignment at L-digitata_M_contig100298:1..942- (Laminaria digitata LdigPH10_18mv male)
GGCAACATTCTCGGCCGCTGGGACATCCAAATCATGCCCGACACGGCTCC CGAAATTCGGTTCGCCGAAGCCCCGGCCGCAAATGAGAGCAATTCCCTGC GCCTGAGCTACGAGGGCCTCGATGACTACGGCGTTGTTGAGACCCGGGCG CAGATTTCCTGGCCGGACCGCCCCAAGACCACAGGGATTGAGCCCGTTGA CCTTGAGCTCCCATTGCCGCGCCCCGACCCCCGCAATGGCAGCGCGACAA GCGTTCATGATCTGACCTCCCACCCGTGGGCCGGACTGGAGGTTGATGTT GAGCTGACAATTCATGACGGACGCGGTCAAACCAGCACAACAGACCGATT GTCAGTGATCCTGCCGGAACGCAGTTTCAATCATCCTGTTGCAAAGGAAA TCATTGCACAGCGCAGAGTTCTGGCCCTTTCCCCAGAGAACCGCATCGAT GTTGCGCGTTCCCTGCACAATCTCGGCCGCTTCCCGGACCGTTTCAACAA CGACCTTGCGGTCTTCCTGTCATTAATGACAGCACGTTCGCGCCTGACCT ATCAGCAGGATTCCAACGGCATCATTTCCGTACTCTCGCTGCTCTGGGAC ACCGCACTCCGGCTCGAGGACGGGTCGCTATCATTGGCACAGCGCGACGT CGACCGGCTTCAGGAGCAGTTGCGCGAAGCGCTTGAGAATGGTGCACCCG AGGAAGAGGTGGCGCAGATTATGGAAGAGCTGCGCGCAGCTCTCGACCGA TACCTCGAGGCCCTCGCACAGAACCTCTCTCAGGCACTCGAGGGCATGGA TCTCTCAACACTTCCCGAGGCCGGGGAAGACCTTGAACTTCTCGACAGCG CTGCGATTCAAGAGTTGATGGAGCAACTCGAGCAGATGGCGCGCCTGGGT GATACAGAGGGCGTACAAGAGCTGCTCGAACGCATGCAGCAG
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Coding sequence (CDS) from alignment at L-digitata_M_contig100298:1..942-

>mRNA_L-digitata_M_contig100298.1.1 ID=mRNA_L-digitata_M_contig100298.1.1|Name=mRNA_L-digitata_M_contig100298.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=942bp|location=Sequence derived from alignment at L-digitata_M_contig100298:1..942- (Laminaria digitata LdigPH10_18mv male)
GGCAACATTCTCGGCCGCTGGGACATCCAAATCATGCCCGACACGGCTCC
CGAAATTCGGTTCGCCGAAGCCCCGGCCGCAAATGAGAGCAATTCCCTGC
GCCTGAGCTACGAGGGCCTCGATGACTACGGCGTTGTTGAGACCCGGGCG
CAGATTTCCTGGCCGGACCGCCCCAAGACCACAGGGATTGAGCCCGTTGA
CCTTGAGCTCCCATTGCCGCGCCCCGACCCCCGCAATGGCAGCGCGACAA
GCGTTCATGATCTGACCTCCCACCCGTGGGCCGGACTGGAGGTTGATGTT
GAGCTGACAATTCATGACGGACGCGGTCAAACCAGCACAACAGACCGATT
GTCAGTGATCCTGCCGGAACGCAGTTTCAATCATCCTGTTGCAAAGGAAA
TCATTGCACAGCGCAGAGTTCTGGCCCTTTCCCCAGAGAACCGCATCGAT
GTTGCGCGTTCCCTGCACAATCTCGGCCGCTTCCCGGACCGTTTCAACAA
CGACCTTGCGGTCTTCCTGTCATTAATGACAGCACGTTCGCGCCTGACCT
ATCAGCAGGATTCCAACGGCATCATTTCCGTACTCTCGCTGCTCTGGGAC
ACCGCACTCCGGCTCGAGGACGGGTCGCTATCATTGGCACAGCGCGACGT
CGACCGGCTTCAGGAGCAGTTGCGCGAAGCGCTTGAGAATGGTGCACCCG
AGGAAGAGGTGGCGCAGATTATGGAAGAGCTGCGCGCAGCTCTCGACCGA
TACCTCGAGGCCCTCGCACAGAACCTCTCTCAGGCACTCGAGGGCATGGA
TCTCTCAACACTTCCCGAGGCCGGGGAAGACCTTGAACTTCTCGACAGCG
CTGCGATTCAAGAGTTGATGGAGCAACTCGAGCAGATGGCGCGCCTGGGT
GATACAGAGGGCGTACAAGAGCTGCTCGAACGCATGCAGCAG
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