mRNA_L-digitata_M_contig100215.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100215.1.1
Unique NamemRNA_L-digitata_M_contig100215.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A1W6K6D5_9GAMM (Nickel and cobalt resistance protein CnrA n=21 Tax=Bacteria TaxID=2 RepID=A0A1W6K6D5_9GAMM)

HSP 1 Score: 580 bits (1495), Expect = 1.700e-198
Identity = 313/314 (99.68%), Postives = 313/314 (99.68%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAA MPL
Sbjct:  131 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAAFMPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A072MYR2_9GAMM (Acriflavin resistance protein n=2 Tax=Marinobacter TaxID=2742 RepID=A0A072MYR2_9GAMM)

HSP 1 Score: 534 bits (1375), Expect = 1.750e-180
Identity = 280/314 (89.17%), Postives = 301/314 (95.86%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPA+++AVSGS SVTELS VAERLKQNLADI GVSRI+LEGDADEQITLALDDAAM+RLGISPARV+DTLARRNQT PGGFV++DGRRLSVLPNSEF S+DAIRATPIELPDGSQVPLAAAA+VWRGPAEPRQPE WYDGERVVLVS+IMEEGSTDAIRFGER+R+R+ TIR EF PYEIREMFFQPDKV++RLDNLAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVE+IQGYLD GMRRLDAL+QSV ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAVVMAVSGSPSVTELSKVAERLKQNLADIPGVSRIDLEGDADEQITLALDDAAMFRLGISPARVMDTLARRNQTIPGGFVVSDGRRLSVLPNSEFASIDAIRATPIELPDGSQVPLAAAADVWRGPAEPRQPETWYDGERVVLVSIIMEEGSTDAIRFGERIRDRIETIRAEFEPYEIREMFFQPDKVKDRLDNLAWSLVLSVLIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVENIQGYLDQGMRRLDALRQSVSELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: R8B3L8_9GAMM (Acriflavin resistance protein n=3 Tax=Marinobacter TaxID=2742 RepID=R8B3L8_9GAMM)

HSP 1 Score: 526 bits (1354), Expect = 2.470e-177
Identity = 278/314 (88.54%), Postives = 298/314 (94.90%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAI+LAV GS SVTELS+VAERLKQNLADI GVSRIELEGDADEQITLALDDAAM+RLGISPARV+DTLARRNQT PGGFV+ DGRR+SVLPNSEF  +DAIRATPIELPDGSQVPLAAAAEVWRGP EPRQPE W+DGERVVLVS+IMEE STDAIRFGERVR+RL  IR +FAPY+IREMFFQPDKVE+RLDNLAWSLV+SVIIIVAVV TGMGIRMG+LVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQG+LD+G+RRLDALKQSV+ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAIVLAVGGSTSVTELSEVAERLKQNLADIPGVSRIELEGDADEQITLALDDAAMFRLGISPARVMDTLARRNQTIPGGFVVVDGRRMSVLPNSEFADIDAIRATPIELPDGSQVPLAAAAEVWRGPEEPRQPETWFDGERVVLVSVIMEEDSTDAIRFGERVRKRLDAIRGDFAPYQIREMFFQPDKVEQRLDNLAWSLVLSVIIIVAVVVTGMGIRMGILVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGHLDNGIRRLDALKQSVRELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A1I6GTQ5_9GAMM (Multidrug efflux pump subunit AcrB n=31 Tax=Marinobacter TaxID=2742 RepID=A0A1I6GTQ5_9GAMM)

HSP 1 Score: 525 bits (1353), Expect = 3.490e-177
Identity = 275/314 (87.58%), Postives = 299/314 (95.22%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAI+LAV GS SVTELSDVAERLKQNL+D+ G+SRIELEGDADEQITLALDDAA+YRLGISPARVLDTLARRNQT PGGFV+ DGRRLSVLPNSEF  +DAIRATPIELPDGSQVPLAAAA+VWRGPAEPRQPE WY+GERVVLVS+IMEEG+TDAIRFG+RVRER++ IR +FAPYEIREMFFQPDKVEERLDNLAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALIS+GLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVE+IQG+LD+G RRLDAL+ +V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAIVLAVGGSPSVTELSDVAERLKQNLSDLPGISRIELEGDADEQITLALDDAALYRLGISPARVLDTLARRNQTIPGGFVVVDGRRLSVLPNSEFADIDAIRATPIELPDGSQVPLAAAADVWRGPAEPRQPETWYNGERVVLVSIIMEEGNTDAIRFGQRVRERMAQIRPDFAPYEIREMFFQPDKVEERLDNLAWSLVLSVVIIVAVVFTGMGIRMGLLVASILPMVALISVGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVENIQGHLDNGERRLDALRSAVGELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A366GZX1_9GAMM (Multidrug efflux pump subunit AcrB n=3 Tax=Marinobacter pelagius TaxID=379482 RepID=A0A366GZX1_9GAMM)

HSP 1 Score: 521 bits (1342), Expect = 1.550e-175
Identity = 273/314 (86.94%), Postives = 297/314 (94.59%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAI+LAV+GS SVTELS VAERLK+NLADI GVSRIELEGDADEQITLALDDAA++RLGISP+RVLDTLARRNQT PGGFV+ DGRRLSVLPNSEF  +DAIRATPIELPDGSQVPLAAAA+VWRGPAEPRQPE WYDGERVVLVS+IMEEG+TDAIRFGE+VRER+  +R EFAPY+IREMFFQPDKVEERLDNLAWSLV+SV+IIV VVFTGMG+RMGLLVASILPMVA+ISIGLYDLGGGVLHQ+AVIGMVISLGILIDNAIVIVE+IQG LD GMRRLDAL+Q+V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAIVLAVAGSPSVTELSTVAERLKRNLADIPGVSRIELEGDADEQITLALDDAALFRLGISPSRVLDTLARRNQTIPGGFVVVDGRRLSVLPNSEFADIDAIRATPIELPDGSQVPLAAAADVWRGPAEPRQPETWYDGERVVLVSLIMEEGTTDAIRFGEQVRERIEQLRPEFAPYQIREMFFQPDKVEERLDNLAWSLVLSVLIIVGVVFTGMGLRMGLLVASILPMVAMISIGLYDLGGGVLHQVAVIGMVISLGILIDNAIVIVENIQGQLDQGMRRLDALQQAVGELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A1D9GR61_9GAMM (Acriflavin resistance protein n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GR61_9GAMM)

HSP 1 Score: 520 bits (1339), Expect = 4.380e-175
Identity = 274/314 (87.26%), Postives = 296/314 (94.27%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAI+LAV GS SVTEL+ VAERLKQNL+DI+GVSRI LEGDADEQITLALDDAA+YRLGISPARV++TLARRNQT PGGFV+ DGRRLSVLPNSEF  +DAIRATPIELPDGSQVPLAAAA+VWRGP+EP QPE WYDGERVVL+S+IMEEG+TDAIRFG+RVRER+  +R EF PYEIREMFFQPDKVEERLDNLAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLD GMRRLDAL+Q+V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAIVLAVGGSPSVTELTGVAERLKQNLSDINGVSRIGLEGDADEQITLALDDAALYRLGISPARVMETLARRNQTIPGGFVVVDGRRLSVLPNSEFADIDAIRATPIELPDGSQVPLAAAADVWRGPSEPLQPETWYDGERVVLLSVIMEEGTTDAIRFGKRVRERVEQVRAEFDPYEIREMFFQPDKVEERLDNLAWSLVLSVLIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDHGMRRLDALRQAVSELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: UPI001C5E9980 (efflux RND transporter permease subunit n=6 Tax=Marinobacter TaxID=2742 RepID=UPI001C5E9980)

HSP 1 Score: 518 bits (1335), Expect = 1.740e-174
Identity = 269/314 (85.67%), Postives = 299/314 (95.22%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPAI+LAV+G  SVTELS+VAERLKQNL+ I+GVSR++LEGDADEQITLALDDAA+YRLGISPARV+DTLARRNQT PGGFV+ +GRRLSVLPNSEF  +DAIRATPIELPDGSQVPLAAAA+VWRGP EPRQPE W+DGERVVLVS+IMEEG+TDAIRFG+RVRER+ +IR EF PYEIREMFFQPDKVEERLDNLAWSLV+SV+IIVAVVFTGMGIRMGLL+ASILPMVALIS+GLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVE+IQG+LD+GMRRLDAL+++V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAIVLAVAGGPSVTELSEVAERLKQNLSGINGVSRVDLEGDADEQITLALDDAALYRLGISPARVMDTLARRNQTIPGGFVVVNGRRLSVLPNSEFADIDAIRATPIELPDGSQVPLAAAADVWRGPVEPRQPETWFDGERVVLVSVIMEEGTTDAIRFGQRVRERVESIRSEFQPYEIREMFFQPDKVEERLDNLAWSLVLSVLIIVAVVFTGMGIRMGLLMASILPMVALISVGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVENIQGHLDEGMRRLDALRKAVAELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A4Z1BS30_9GAMM (Efflux RND transporter permease subunit n=1 Tax=Marinobacter confluentis TaxID=1697557 RepID=A0A4Z1BS30_9GAMM)

HSP 1 Score: 517 bits (1331), Expect = 8.310e-174
Identity = 270/314 (85.99%), Postives = 298/314 (94.90%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            +IDIPAIILAV GS SV EL+DVAERLK NL+DI G+SR+EL  DADEQ+TLALDDAAMY+LGISPARVL+TLA+RNQT PGG+++++GRR+SVLPNSEF+SVDAIRATPIELPDGSQVPLAAAA+VWRGPAEPRQPEAW+D ERVVLVS+ +EEGSTDAIRFGERVRERL+ I D FAPYEIREMFFQPDKV++RLDNLAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDAL ++VKELAGPLGASTGTT+AA  PL
Sbjct:  137 MIDIPAIILAVGGSSSVVELTDVAERLKDNLSDIRGMSRVELAADADEQVTLALDDAAMYQLGISPARVLNTLAQRNQTIPGGYIVSEGRRVSVLPNSEFSSVDAIRATPIELPDGSQVPLAAAADVWRGPAEPRQPEAWFDSERVVLVSLYLEEGSTDAIRFGERVRERLALIEDNFAPYEIREMFFQPDKVKDRLDNLAWSLVLSVLIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALTRAVKELAGPLGASTGTTLAAFAPL 450          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A2A4XMK8_9GAMM (Acriflavin resistance protein n=14 Tax=root TaxID=1 RepID=A0A2A4XMK8_9GAMM)

HSP 1 Score: 516 bits (1328), Expect = 1.950e-173
Identity = 267/314 (85.03%), Postives = 298/314 (94.90%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LID PAI+LA+ G+ SV+EL+DVAERLKQNL+D++GVSRIELEGDADEQITLALDDAA+YRLGISPAR+L TLA+RNQTTPGGFV+ DGRRLSVLPN+EF  +DAIRATPIELPDGSQVPLAAAA+VWRGPAEPRQPE W+DGERVVL+S+IMEEG TDAIRFGERVRER++ IR +F PYEIREMFFQPDKV +RLDNLAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVE+IQG+LD+GMRRLDAL+++V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDNPAIVLAIGGAPSVSELTDVAERLKQNLSDLTGVSRIELEGDADEQITLALDDAALYRLGISPARILQTLAQRNQTTPGGFVVVDGRRLSVLPNTEFADIDAIRATPIELPDGSQVPLAAAADVWRGPAEPRQPETWFDGERVVLLSLIMEEGETDAIRFGERVRERVAQIRTDFEPYEIREMFFQPDKVSDRLDNLAWSLVLSVLIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVENIQGHLDEGMRRLDALRKAVSELAGPLGASTGTTLAAFAPL 444          
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Match: A0A2T1KVJ7_9GAMM (AcrB/AcrD/AcrF family protein n=1 Tax=Marinobacter fuscus TaxID=2109942 RepID=A0A2T1KVJ7_9GAMM)

HSP 1 Score: 516 bits (1328), Expect = 1.950e-173
Identity = 269/314 (85.67%), Postives = 295/314 (93.95%), Query Frame = 1
Query:    1 LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQITLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEFTSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVSMIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNLAWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPLGASTGTTIAASMPL 942
            LIDIPA++LAV GS SVTELSDVAERLKQNL+DI G+SRIELEGDA EQITLALDDAA++RLGISP R+LDTLARRNQT PGGFV+ +GRRLSVLPN+EFT +DAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPE W+DGERVVL+S+IMEE STDAIRFGER+RERL  IR +F PYEIREMFFQPDKV +RLD+LAWSLV+SV+IIVAVVFTGMGIRMGLLVASILPMVALIS+GLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVE+IQG+LDDGMRRLDAL+ +V ELAGPLGASTGTT+AA  PL
Sbjct:  131 LIDIPAVVLAVGGSASVTELSDVAERLKQNLSDIPGMSRIELEGDASEQITLALDDAALFRLGISPKRILDTLARRNQTIPGGFVVVEGRRLSVLPNTEFTDIDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPETWFDGERVVLLSIIMEEDSTDAIRFGERIRERLDQIRSDFEPYEIREMFFQPDKVADRLDDLAWSLVLSVLIIVAVVFTGMGIRMGLLVASILPMVALISVGLYDLGGGVLHQIAVIGMVISLGILIDNAIVIVENIQGHLDDGMRRLDALRAAVGELAGPLGASTGTTLAAFAPL 444          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100215.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1W6K6D5_9GAMM1.700e-19899.68Nickel and cobalt resistance protein CnrA n=21 Tax... [more]
A0A072MYR2_9GAMM1.750e-18089.17Acriflavin resistance protein n=2 Tax=Marinobacter... [more]
R8B3L8_9GAMM2.470e-17788.54Acriflavin resistance protein n=3 Tax=Marinobacter... [more]
A0A1I6GTQ5_9GAMM3.490e-17787.58Multidrug efflux pump subunit AcrB n=31 Tax=Marino... [more]
A0A366GZX1_9GAMM1.550e-17586.94Multidrug efflux pump subunit AcrB n=3 Tax=Marinob... [more]
A0A1D9GR61_9GAMM4.380e-17587.26Acriflavin resistance protein n=1 Tax=Marinobacter... [more]
UPI001C5E99801.740e-17485.67efflux RND transporter permease subunit n=6 Tax=Ma... [more]
A0A4Z1BS30_9GAMM8.310e-17485.99Efflux RND transporter permease subunit n=1 Tax=Ma... [more]
A0A2A4XMK8_9GAMM1.950e-17385.03Acriflavin resistance protein n=14 Tax=root TaxID=... [more]
A0A2T1KVJ7_9GAMM1.950e-17385.67AcrB/AcrD/AcrF family protein n=1 Tax=Marinobacter... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100215contigL-digitata_M_contig100215:2..943 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start0
Seed ortholog1415754.JQMK01000012_gene716
PFAMsACR_tran
Model size942
Max annot lvl1236|Gammaproteobacteria
Hectar predicted targeting categoryother localisation
Exons1
Evalue2.79e-199
EggNOG OGsCOG0841@1|root,COG0841@2|Bacteria,1MU48@1224|Proteobacteria,1RMBN@1236|Gammaproteobacteria,464D1@72275|Alteromonadaceae
DescriptionBelongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family
Cds size942
COG categoryV
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406605.1358092-CDS-L-digitata_M_contig100215:1..9431682406605.1358092-CDS-L-digitata_M_contig100215:1..943Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100215 2..943 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100215.1.1prot_L-digitata_M_contig100215.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100215 2..943 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100215.1.1

>prot_L-digitata_M_contig100215.1.1 ID=prot_L-digitata_M_contig100215.1.1|Name=mRNA_L-digitata_M_contig100215.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=314bp
LIDIPAIILAVSGSGSVTELSDVAERLKQNLADISGVSRIELEGDADEQI
TLALDDAAMYRLGISPARVLDTLARRNQTTPGGFVIADGRRLSVLPNSEF
TSVDAIRATPIELPDGSQVPLAAAAEVWRGPAEPRQPEAWYDGERVVLVS
MIMEEGSTDAIRFGERVRERLSTIRDEFAPYEIREMFFQPDKVEERLDNL
AWSLVMSVIIIVAVVFTGMGIRMGLLVASILPMVALISIGLYDLGGGVLH
QIAVIGMVISLGILIDNAIVIVESIQGYLDDGMRRLDALKQSVKELAGPL
GASTGTTIAASMPL
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mRNA from alignment at L-digitata_M_contig100215:2..943-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100215.1.1 ID=mRNA_L-digitata_M_contig100215.1.1|Name=mRNA_L-digitata_M_contig100215.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=942bp|location=Sequence derived from alignment at L-digitata_M_contig100215:2..943- (Laminaria digitata LdigPH10_18mv male)
CTGATTGATATTCCTGCCATTATTCTTGCGGTCAGCGGTTCTGGTTCGGT TACCGAACTGAGCGACGTGGCAGAGCGCCTGAAACAGAATCTGGCGGACA TTTCCGGCGTGTCCCGTATTGAACTGGAGGGTGACGCGGACGAACAGATC ACCCTGGCGCTGGACGACGCAGCCATGTATCGGCTGGGCATTTCCCCCGC GCGCGTGCTGGACACGTTGGCGCGCCGCAACCAGACCACGCCGGGCGGTT TTGTTATCGCCGACGGTCGTCGTCTGTCGGTGTTGCCAAACAGCGAATTC ACCAGTGTGGATGCCATTCGCGCGACGCCCATTGAACTGCCGGACGGCTC CCAGGTGCCCCTCGCCGCGGCTGCTGAAGTCTGGCGTGGCCCAGCGGAGC CCCGGCAACCGGAAGCCTGGTACGACGGTGAACGGGTGGTGCTGGTTTCC ATGATCATGGAGGAGGGCAGTACCGACGCCATTCGGTTTGGCGAACGTGT GCGGGAACGGCTATCGACGATCCGTGACGAGTTCGCTCCCTACGAAATCC GGGAGATGTTCTTTCAGCCCGATAAGGTGGAAGAGCGGCTCGACAACCTG GCCTGGAGCCTGGTGATGTCCGTTATCATCATTGTGGCCGTGGTGTTCAC CGGTATGGGAATCCGCATGGGGTTGCTGGTGGCGTCGATCCTGCCGATGG TGGCGTTGATCAGTATCGGCCTTTATGACTTGGGGGGTGGTGTACTGCAC CAGATTGCTGTCATCGGCATGGTGATTTCCCTCGGTATCCTGATCGACAA TGCCATTGTGATTGTCGAGAGCATCCAGGGATACCTGGATGACGGCATGC GACGGTTGGACGCCCTGAAGCAATCTGTGAAAGAGCTGGCGGGGCCGTTG GGAGCCTCCACAGGTACTACCATTGCGGCGTCCATGCCGCTG
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Coding sequence (CDS) from alignment at L-digitata_M_contig100215:2..943-

>mRNA_L-digitata_M_contig100215.1.1 ID=mRNA_L-digitata_M_contig100215.1.1|Name=mRNA_L-digitata_M_contig100215.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=942bp|location=Sequence derived from alignment at L-digitata_M_contig100215:2..943- (Laminaria digitata LdigPH10_18mv male)
CTGATTGATATTCCTGCCATTATTCTTGCGGTCAGCGGTTCTGGTTCGGT
TACCGAACTGAGCGACGTGGCAGAGCGCCTGAAACAGAATCTGGCGGACA
TTTCCGGCGTGTCCCGTATTGAACTGGAGGGTGACGCGGACGAACAGATC
ACCCTGGCGCTGGACGACGCAGCCATGTATCGGCTGGGCATTTCCCCCGC
GCGCGTGCTGGACACGTTGGCGCGCCGCAACCAGACCACGCCGGGCGGTT
TTGTTATCGCCGACGGTCGTCGTCTGTCGGTGTTGCCAAACAGCGAATTC
ACCAGTGTGGATGCCATTCGCGCGACGCCCATTGAACTGCCGGACGGCTC
CCAGGTGCCCCTCGCCGCGGCTGCTGAAGTCTGGCGTGGCCCAGCGGAGC
CCCGGCAACCGGAAGCCTGGTACGACGGTGAACGGGTGGTGCTGGTTTCC
ATGATCATGGAGGAGGGCAGTACCGACGCCATTCGGTTTGGCGAACGTGT
GCGGGAACGGCTATCGACGATCCGTGACGAGTTCGCTCCCTACGAAATCC
GGGAGATGTTCTTTCAGCCCGATAAGGTGGAAGAGCGGCTCGACAACCTG
GCCTGGAGCCTGGTGATGTCCGTTATCATCATTGTGGCCGTGGTGTTCAC
CGGTATGGGAATCCGCATGGGGTTGCTGGTGGCGTCGATCCTGCCGATGG
TGGCGTTGATCAGTATCGGCCTTTATGACTTGGGGGGTGGTGTACTGCAC
CAGATTGCTGTCATCGGCATGGTGATTTCCCTCGGTATCCTGATCGACAA
TGCCATTGTGATTGTCGAGAGCATCCAGGGATACCTGGATGACGGCATGC
GACGGTTGGACGCCCTGAAGCAATCTGTGAAAGAGCTGGCGGGGCCGTTG
GGAGCCTCCACAGGTACTACCATTGCGGCGTCCATGCCGCTG
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