mRNA_L-digitata_M_contig100211.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A2D8G1W2_9PROT (Phosphohydrolase n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G1W2_9PROT) HSP 1 Score: 235 bits (599), Expect = 1.970e-77 Identity = 108/142 (76.06%), Postives = 122/142 (85.92%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLR 426
M+ REYP RP CGVG+VC K + VLLVKRAKPP+RWEWSIPGGGQELGETTR ALRELKEETG+DA LIGLVDV+D+V +D G I+FHYTLVDFAA W AGEP+ADDDVSDA WAPLSEI+ GLWSETVR+IR+A +R
Sbjct: 1 MTDREYPXRPICGVGVVCLKDESVLLVKRAKPPVRWEWSIPGGGQELGETTRAAALRELKEETGVDAELIGLVDVIDTVREDEKGRIQFHYTLVDFAAVWKAGEPIADDDVSDAEWAPLSEIENXGLWSETVRVIRKAVNMR 142
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A3D2BP26_9PROT (Phosphohydrolase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BP26_9PROT) HSP 1 Score: 228 bits (581), Expect = 1.020e-74 Identity = 103/142 (72.54%), Postives = 123/142 (86.62%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLR 426
MS REYPD+P CGVG+VC K D+VLLVKRAKPPI W+WSIPGGGQELGETTRE ALRELKEETG+DA LIGL+DV+D+V +D +G I+FHYTLVDFAA W +GE +ADDDVSDA+W LS+++ GLWSET+R+IREA +R
Sbjct: 1 MSSREYPDKPVCGVGVVCLKDDQVLLVKRAKPPITWQWSIPGGGQELGETTREAALRELKEETGVDAELIGLIDVIDTVREDEEGRIQFHYTLVDFAAIWTSGEALADDDVSDAQWVHLSDLENKGLWSETIRVIREAVIMR 142
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A2S6Q7M4_9PROT (RNA pyrophosphohydrolase n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q7M4_9PROT) HSP 1 Score: 225 bits (574), Expect = 1.190e-73 Identity = 100/143 (69.93%), Postives = 121/143 (84.62%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLRG 429
M+PREYP +P CGVG+VC + D+VLLVKRAK PI W+WSIPGGGQELGETTR ALREL+EETG+DA LIGL+DV+D++ +D G I++HYTLVDF A W +GEPVADDDVSDARW PLSEI+ LW ET+R+IR+A K+RG
Sbjct: 1 MNPREYPTQPVCGVGVVCLRDDKVLLVKRAKAPITWQWSIPGGGQELGETTRTAALRELQEETGVDAELIGLIDVIDTIREDDSGRIQYHYTLVDFVAVWTSGEPVADDDVSDARWVPLSEIEKYDLWFETIRVIRKAVKIRG 143
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: UPI001A962DA1 (NUDIX hydrolase n=2 Tax=Roseomonas haemaphysalidis TaxID=2768162 RepID=UPI001A962DA1) HSP 1 Score: 179 bits (454), Expect = 2.440e-55 Identity = 82/140 (58.57%), Postives = 103/140 (73.57%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEK 420
MS REYPDRP+ G+G+V FKGD VLLV+R KPP EWS+PGG Q LGET TA REL+EE GI+A + L VVD++ ++ DG FHYT+VDFAAEW++GEPVA DDV+DARW ++ LGLW E +R+I E +
Sbjct: 1 MSSREYPDRPWIGIGVVVFKGDAVLLVRRGKPPRMGEWSVPGGAQALGETVEATARRELREEAGIEAGPLVLAAVVDALDREPDGRARFHYTIVDFAAEWLSGEPVAGDDVTDARWFRPEDLPALGLWDEALRVIAEGRR 140
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A6N7FHB3_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FHB3_9PROT) HSP 1 Score: 175 bits (443), Expect = 1.580e-53 Identity = 80/141 (56.74%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 4 SPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLR 426
+PR YPDRPF GVG+V F+GD VLL +R K P R++WSIPGG QELGET E +RE+ EETG+ ++GLVDVVD++S+D DG ++FHYTLVD AEW AGE VADDDV+ +W L +D + + T +IREA++ R
Sbjct: 7 NPRLYPDRPFVGVGVVIFRGDEVLLAQRGKMPRRYDWSIPGGAQELGETVFEAGMREILEETGLTVEILGLVDVVDAISRDEDGRVQFHYTLVDLVAEWRAGEAVADDDVAALQWVDLGALDGVEMREVTREVIREADRKR 147
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A6C1QSQ0_9SPIO (NUDIX domain-containing protein n=1 Tax=Spirochaetaceae bacterium TaxID=1898206 RepID=A0A6C1QSQ0_9SPIO) HSP 1 Score: 175 bits (443), Expect = 1.690e-53 Identity = 77/141 (54.61%), Postives = 104/141 (73.76%), Query Frame = 1
Query: 4 SPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLR 426
+ REYP RPF GVG+V + D VLL++R PP EWS+PGGGQ +GET RETA+RE+ EETGI ++V+D++ +D DG +++HYTLVDF AEW +GE VA DD A W PLS+++ LGLWS+T+ +IREA++ R
Sbjct: 17 TSREYPTRPFIGVGVVVLRDDSVLLIRRGNPPRAGEWSLPGGGQHVGETVRETAVREVSEETGITIGEPQFLEVIDAIFRDPDGRVQYHYTLVDFWAEWASGEAVAADDAQHAEWVPLSDLEELGLWSKTIEVIREADRRR 157
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A6A7KMU7_9PROT (NUDIX domain-containing protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6A7KMU7_9PROT) HSP 1 Score: 173 bits (439), Expect = 3.510e-53 Identity = 80/133 (60.15%), Postives = 99/133 (74.44%), Query Frame = 1
Query: 10 REYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIR 408
REYPDRPF GVG+V ++GD VLL++R K P WS+PGG QELGET RETA RE++EET ++ + GL+DVVD V KD +G ++FHYTLVDF AEWV+GE VA D + ARW L +ID LW ET R+IR
Sbjct: 3 REYPDRPFVGVGVVVWRGDEVLLIERGKGPRTGGWSLPGGKQELGETVRETAHREIREETAVEIEITGLLDVVDMVRKDGEGRVQFHYTLVDFTAEWVSGEAVAGTDAAAARWVRLEDIDQYRLWDETRRVIR 135
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A3A9JC77_9PROT (NUDIX domain-containing protein n=3 Tax=Roseomonas TaxID=125216 RepID=A0A3A9JC77_9PROT) HSP 1 Score: 173 bits (439), Expect = 4.390e-53 Identity = 78/140 (55.71%), Postives = 102/140 (72.86%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEK 420
MS REYPDRP+ G+G+V F+G+ VLLV+R KPP EWS+PGG Q LGE +TA REL+EE GI+ + L VVD++ DA G FHYT++DFA EW++GEPVA DDV++ARW +E+ LGLWSE +R+I E +
Sbjct: 1 MSSREYPDRPWIGIGLVAFRGEDVLLVRRGKPPRMGEWSVPGGAQALGEPAEDTARRELREEAGIEVGPLVLAGVVDALDSDAAGRTRFHYTIIDFAGEWISGEPVAGDDVTEARWFSPAELPGLGLWSEALRVIAEGRR 140
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A353LQ32_9PROT (Phosphohydrolase n=6 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A353LQ32_9PROT) HSP 1 Score: 173 bits (439), Expect = 7.510e-53 Identity = 79/142 (55.63%), Postives = 102/142 (71.83%), Query Frame = 1
Query: 4 SPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLRG 429
PR++P RP+ GVG+V FK D+VLLV+RAKPP WSIPGG QELGET + +RE+ EETGI + GL+D++D + + DG I HYTL+D+ A W+AGEP A DDVSDARW PL ++ LWSET+R+I E+ RG
Sbjct: 7 EPRDFPTRPWVGVGVVIFKDDKVLLVRRAKPPRAGSWSIPGGMQELGETAAQAGIREVCEETGITVAIDGLIDIIDVIVPEDDGRIRTHYTLIDYHAHWLAGEPQAADDVSDARWVPLDKLADYRLWSETLRVINESATARG 148
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Match: A0A845BKD5_9PROT (NUDIX domain-containing protein n=1 Tax=Roseomonas coralli TaxID=2545983 RepID=A0A845BKD5_9PROT) HSP 1 Score: 172 bits (437), Expect = 7.540e-53 Identity = 79/143 (55.24%), Postives = 101/143 (70.63%), Query Frame = 1
Query: 1 MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETTRETALRELKEETGIDARLIGLVDVVDSVSKDADGSIEFHYTLVDFAAEWVAGEPVADDDVSDARWAPLSEIDTLGLWSETVRIIREAEKLRG 429
MS REYPDRP+ G+G++ F+G+ VLLV+R+KPP + EWSIPGG Q LGET A REL EE GI+ + L VVD++S DA+G FHYT++DFA W GEPVA DDVS+ARW +E+ LGLW+E +R I E + G
Sbjct: 1 MSTREYPDRPWIGIGVIAFRGEDVLLVRRSKPPRQGEWSIPGGAQHLGETAEAAARRELLEEAGIEVGPLMLAVVVDALSHDAEGRARFHYTIIDFAGRWAGGEPVAGDDVSEARWFSPAELPALGLWAEAIRAIEEGRRRLG 143 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100211.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100211.2.1 >prot_L-digitata_M_contig100211.2.1 ID=prot_L-digitata_M_contig100211.2.1|Name=mRNA_L-digitata_M_contig100211.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=145bp MSPREYPDRPFCGVGIVCFKGDRVLLVKRAKPPIRWEWSIPGGGQELGETback to top mRNA from alignment at L-digitata_M_contig100211:460..894+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100211.2.1 ID=mRNA_L-digitata_M_contig100211.2.1|Name=mRNA_L-digitata_M_contig100211.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=435bp|location=Sequence derived from alignment at L-digitata_M_contig100211:460..894+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100211:460..894+ >mRNA_L-digitata_M_contig100211.2.1 ID=mRNA_L-digitata_M_contig100211.2.1|Name=mRNA_L-digitata_M_contig100211.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=435bp|location=Sequence derived from alignment at L-digitata_M_contig100211:460..894+ (Laminaria digitata LdigPH10_18mv male)back to top |