mRNA_L-digitata_M_contig100211.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A3D2BP66_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A3D2BP66_9PROT) HSP 1 Score: 229 bits (583), Expect = 3.030e-71 Identity = 104/148 (70.27%), Postives = 121/148 (81.76%), Query Frame = 1
Query: 1 FVCVLSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRKGDGLP 444
FV VLS+G +A+RLQ+ GVP +VPA GI LS+ +Q +FAA WTDYP +LC+LFGYFG+T TLAYAVLNQ FPQ LTGRVNTAQNML+FIAAF QWLVG+IIG YPSPG+GLYS DGHQ AL V + IE+AGF+YFLWPR D P
Sbjct: 279 FVGVLSIGLVAQRLQKLGVPTIVPAVAGIGLSLVVQVMFAAAWTDYPAVLCLLFGYFGSTSTLAYAVLNQKFPQKLTGRVNTAQNMLTFIAAFTTQWLVGIIIGLYPSPGDGLYSTDGHQMALTVLIIIELAGFIYFLWPRNTPDPPP 426
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A2S6Q789_9PROT (Putative sulfoacetate transporter SauU n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q789_9PROT) HSP 1 Score: 228 bits (580), Expect = 8.320e-71 Identity = 103/145 (71.03%), Postives = 119/145 (82.07%), Query Frame = 1
Query: 1 FVCVLSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRKGD 435
FV VLS+G +AER Q GVP VVPA GIA+S+ +Q LFAA WTDYP +LC+LFGYFG++ TLAYAVLNQ FP LTGRVNTAQNML+FIAAFA QWLVGV IG YP+PGEGLYSADGHQ AL + + +E+AGF+YFLWPR D
Sbjct: 278 FVGVLSIGLIAERAQNLGVPTVVPAVAGIAMSLIVQVLFAAAWTDYPAILCLLFGYFGSSSTLAYAVLNQKFPHRLTGRVNTAQNMLTFIAAFATQWLVGVTIGLYPAPGEGLYSADGHQVALAILIAVEVAGFIYFLWPRNTPD 422
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A2D8G238_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2D8G238_9PROT) HSP 1 Score: 192 bits (489), Expect = 8.040e-57 Identity = 86/139 (61.87%), Postives = 104/139 (74.82%), Query Frame = 1
Query: 10 VLSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRR 426
VLS+G AE LQR G+ PVVP IG LSI +Q +FA WTDYP L C LFGYFG+T TL YAVLNQ FP L GRVNTAQNML FI +F++QW+ GV IG +P+P EGLYSA GHQ A+ F+ +E+ G ++FLWPR+
Sbjct: 320 VLSIGVFAELLQRLGIQPVVPLIIGTILSIIVQGMFALAWTDYPSLXCFLFGYFGSTSTLVYAVLNQKFPNELAGRVNTAQNMLIFITSFSIQWVAGVXIGLFPAPXEGLYSAXGHQMAIFXFISLEVLGVIFFLWPRK 458
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A2E8XP38_9PROT (MFS transporter n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A2E8XP38_9PROT) HSP 1 Score: 133 bits (334), Expect = 2.440e-34 Identity = 62/143 (43.36%), Postives = 93/143 (65.03%), Query Frame = 1
Query: 13 LSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRKGDGL 441
L +GF AERL RRG+ P+V A +G+ L I +Q + AGW D PVLL ++FG G TG + +AV++ FP +L GR +TA N++ F AAFA+QW +G +I +P+ +G Y+A G+QAA + + ++I F + L R + L
Sbjct: 276 LIIGFAAERLDRRGIAPIVTAGVGMGLFILVQFVVMAGWADSPVLLWLVFGATGTTGVVCFAVISHAFPADLAGRASTALNLMVFGAAFALQWGMGEVINIWPTGADGSYAAAGYQAAFGIALALQIVAFAWMLIRRPQAPAL 418
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A433HKR2_9GAMM (MFS transporter n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A433HKR2_9GAMM) HSP 1 Score: 128 bits (321), Expect = 1.950e-32 Identity = 65/144 (45.14%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 13 LSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRKGDGLP 444
LS+G L RL R VPP+ A + + + I IQA AAG+T P+LL + FG+FG TL+YA+L+Q FP L GRVNTA N+L FIAAF +QW +G +IG +P G Y+ G+ A L + V ++I ++F W G P
Sbjct: 277 LSLGTLTYRLNRLEVPPMAVAVVSMVIFIGIQAALAAGYTGTPLLLWIAFGFFGTASTLSYAILSQAFPPGLAGRVNTAFNLLVFIAAFVMQWGLGAVIGLWPRTAAGGYAPVGYSAGLGLAVALQITALVWF-WCAGAGSRQP 419
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A2E3K384_9PROT (MFS transporter n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E3K384_9PROT) HSP 1 Score: 126 bits (317), Expect = 6.810e-32 Identity = 64/141 (45.39%), Postives = 86/141 (60.99%), Query Frame = 1
Query: 1 FVCVLSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPR 423
FV V+ +GFLAERLQ+ + P+ +G+A SI IQ F + +L ++ L Y+VL Q FPQ LTGRVNTAQNML+F+AAF QWL+GVII +P Y ++ H A +V + IE FLYF+WP+
Sbjct: 266 FVGVIGIGFLAERLQKYDIKPIAIVCLGVAGSIGIQTCFIFDFFYSKRVLXXXXXXXXSSTLLVYSVLTQRFPQRLTGRVNTAQNMLTFVAAFISQWLIGVIINYWPKLENLGYPSEAHITAFVVMIVIETLAFLYFVWPQ 406
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A523PRQ4_9PROT (MFS transporter n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A523PRQ4_9PROT) HSP 1 Score: 124 bits (311), Expect = 5.640e-31 Identity = 60/144 (41.67%), Postives = 89/144 (61.81%), Query Frame = 1
Query: 22 GFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWP------RRKGD 435
G +AERL RRG+ P+ A IG+ +S+ +QA+ GW + + L +LFG+FG T + YAVL+Q FP L GRV T N+L F AFA QW +GV+I +P+ G Y +QAAL + + +++AG +++L RR+ D
Sbjct: 277 GAVAERLSRRGIQPMTVAGIGMVVSLLMQAMLMLGWRNMALPLWMLFGFFGTTSIIPYAVLSQSFPAPLVGRVITGLNLLVFTTAFACQWGIGVLINLWPTTSTGGYPPPAYQAALAMMLALQVAGLIWYLVSAGRRPVRRRSD 420
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: UPI001C84C908 (MFS transporter n=1 Tax=Desulfuromonas versatilis TaxID=2802975 RepID=UPI001C84C908) HSP 1 Score: 122 bits (307), Expect = 1.810e-30 Identity = 58/139 (41.73%), Postives = 87/139 (62.59%), Query Frame = 1
Query: 13 LSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRK 429
L++G ERL RRGV P+ A G+ + +Q A + P L +LFG+FG TG L YA+L+Q FP+ L GR NT N+L F+AAFA QW +G +IG +P+ G Y G++AA I+ + ++++G ++LW R+
Sbjct: 270 LTMGSATERLGRRGVRPIRVATCGMGAFMLVQLGVLAFGSRLPTPLWMLFGFFGTTGILPYAILSQSFPRRLAGRANTGLNLLVFVAAFAAQWGIGAVIGLWPALAGGGYHPAGYRAAFILMLMLQLSGCAWYLWAARR 408
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A2J6IW86_9DELT (MFS transporter n=1 Tax=Desulfuromonas sp. TaxID=892 RepID=A0A2J6IW86_9DELT) HSP 1 Score: 120 bits (302), Expect = 9.550e-30 Identity = 58/132 (43.94%), Postives = 84/132 (63.64%), Query Frame = 1
Query: 22 GFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLW 417
G LAERL RRG+ P+ AA G+ L + Q+L ++D +L +LFG+FG L YA+L+QHFP NLTGR NTA N+L F AAF+ QW +GVII +P+ G Y+ G++A + ++I +F++
Sbjct: 269 GALAERLSRRGLTPLTTAATGLFLFLAAQSLLLLPFSDLALLRWLLFGFFGTAAILPYAILSQHFPPNLTGRANTALNLLVFFAAFSAQWGIGVIIDFWPTTETGGYAVAGYRAGFGTTIILQILAIAWFIF 400
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Match: A0A7V8TVJ4_9GAMM (MFS transporter n=1 Tax=Ectothiorhodospiraceae bacterium WFHF3C12 TaxID=1914406 RepID=A0A7V8TVJ4_9GAMM) HSP 1 Score: 120 bits (302), Expect = 1.080e-29 Identity = 55/141 (39.01%), Postives = 85/141 (60.28%), Query Frame = 1
Query: 16 SVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLCVLFGYFGATGTLAYAVLNQHFPQNLTGRVNTAQNMLSFIAAFAVQWLVGVIIGAYPSPGEGLYSADGHQAALIVFVCIEIAGFLYFLWPRRKGDG 438
++G + ERL R GV PV A G+ + + AL A+GWT + +L FG+ +TGTL+YA+++QHF ++L GR NTA N+L F+AAFA QWL+GV++ + P Y+ G+Q A +++ +F R+ G
Sbjct: 279 TMGLMTERLSRLGVRPVSVAGAGMTIYVAAVALIASGWTLWLPVLLAAFGFLASTGTLSYALMSQHFSRHLAGRANTALNLLVFVAAFAAQWLIGVVLLPWEDPATHAYALPGYQVAFGGLAAVQLGTLAWFFISGRRAPG 419 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100211.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100211.1.1 >prot_L-digitata_M_contig100211.1.1 ID=prot_L-digitata_M_contig100211.1.1|Name=mRNA_L-digitata_M_contig100211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=149bp FVCVLSVGFLAERLQRRGVPPVVPAAIGIALSICIQALFAAGWTDYPVLLback to top mRNA from alignment at L-digitata_M_contig100211:3..449+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100211.1.1 ID=mRNA_L-digitata_M_contig100211.1.1|Name=mRNA_L-digitata_M_contig100211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=447bp|location=Sequence derived from alignment at L-digitata_M_contig100211:3..449+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100211:3..449+ >mRNA_L-digitata_M_contig100211.1.1 ID=mRNA_L-digitata_M_contig100211.1.1|Name=mRNA_L-digitata_M_contig100211.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=447bp|location=Sequence derived from alignment at L-digitata_M_contig100211:3..449+ (Laminaria digitata LdigPH10_18mv male)back to top |