mRNA_L-digitata_M_contig100210.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A520NS50_9PROT (Glutathione S-transferase family protein n=2 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A520NS50_9PROT) HSP 1 Score: 395 bits (1014), Expect = 2.730e-138 Identity = 178/200 (89.00%), Postives = 190/200 (95.00%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFL+ISPNNKMPAI+DPDGPDG+ ISVFESAACLIYL K G+F P+D RKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAP REP+ERL YAQ RYINEGTRIYGVIDR+L+G+DWIAADEYTIADMAIMPWLRDPVKQG+D DKFPNL+RWRDK+WARP
Sbjct: 2 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLEISPNNKMPAIIDPDGPDGELISVFESAACLIYLGEKFGRFFPSDPRKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPEREPKERLEYAQNRYINEGTRIYGVIDRRLEGRDWIAADEYTIADMAIMPWLRDPVKQGVDGDKFPNLMRWRDKLWARP 201
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A2S6Q9L0_9PROT (Disulfide-bond oxidoreductase YfcG n=1 Tax=Alphaproteobacteria bacterium MarineAlpha11_Bin1 TaxID=2013106 RepID=A0A2S6Q9L0_9PROT) HSP 1 Score: 384 bits (985), Expect = 7.180e-134 Identity = 172/200 (86.00%), Postives = 187/200 (93.50%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVYTWPTPNGHKVHIMLHEAEI HNIIPINIQ+GDQFKP+FLKISPNNKMPAIVDP GPD +PIS+FESAACLIYL K+GKF P D RKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAP REP+ERL YA+ RY+NEG RIYGVIDRQL+G++WIAADEYTIADMAIMPWLRDPVKQGID++KFPNL+RWRDK+W RP
Sbjct: 2 IDVYTWPTPNGHKVHIMLHEAEIEHNIIPINIQDGDQFKPNFLKISPNNKMPAIVDPSGPDDEPISIFESAACLIYLGEKSGKFFPNDPRKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPEREPKERLEYARDRYVNEGKRIYGVIDRQLEGREWIAADEYTIADMAIMPWLRDPVKQGIDSNKFPNLMRWRDKIWERP 201
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A7C7Z033_9GAMM (Glutathione S-transferase family protein n=8 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A7C7Z033_9GAMM) HSP 1 Score: 322 bits (826), Expect = 1.190e-109 Identity = 146/200 (73.00%), Postives = 164/200 (82.00%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVYTWPTPNGHKVHIMLHE E+ HNI PINIQ GDQF P+FLKISPNNKMPAIVD DGPDGK ISVFESAA L+YLA KT +FMP D R + DV QWLMFQMG+VGPMLGQ HHFNAYAP R E++ Y RY+NE R+YGVIDR+L +WIAA EYTIADMAIMPWLR+P KQG+D ++PN+ RWRD +W RP
Sbjct: 2 IDVYTWPTPNGHKVHIMLHETELEHNIHPINIQAGDQFGPEFLKISPNNKMPAIVDQDGPDGKSISVFESAAILLYLAEKTHRFMPQDARARVDVWQWLMFQMGTVGPMLGQAHHFNAYAPERVEREKIQYGIDRYVNESNRVYGVIDRRLQEAEWIAAGEYTIADMAIMPWLRNPDKQGVDISRYPNVERWRDHIWQRP 201
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A6N7FHE2_9PROT (Glutathione S-transferase family protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FHE2_9PROT) HSP 1 Score: 316 bits (810), Expect = 3.590e-107 Identity = 145/203 (71.43%), Postives = 165/203 (81.28%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMP--ADE-RKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
ID YTWPTPNGHKVHIML E + + + PINIQEGDQFKPDFLKISPNNKMPAIVD DGP G+ ISVFE+ A LIYL NKTGKF+P ADE YDVLQWLMFQMG VGPMLGQ HHFNAYAP REPEER+AY +ARY+NE R+Y VI+R+L G++WIAAD Y++ADMAI PWLRDP KQG+D +P + RWR +W RP
Sbjct: 2 IDCYTWPTPNGHKVHIMLEETGLEYTVHPINIQEGDQFKPDFLKISPNNKMPAIVDRDGPGGREISVFETGAILIYLGNKTGKFLPSLADEPHAYYDVLQWLMFQMGGVGPMLGQAHHFNAYAPDREPEERIAYGRARYVNEAKRLYNVINRRLAGREWIAADRYSVADMAIFPWLRDPAKQGVDIADYPEVERWRQAIWKRP 204
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A4R5JBV0_9BURK (Glutathione S-transferase family protein n=9 Tax=Cupriavidus TaxID=106589 RepID=A0A4R5JBV0_9BURK) HSP 1 Score: 281 bits (719), Expect = 1.560e-93 Identity = 130/200 (65.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVYTW TPNGHKVHIML E + + + PINI GDQF DFLKISPNNK+PAIVDPDGPDGKPIS+FES A L+YLA KTGKF+P D R KYD LQWLMFQMG VGPMLGQ HHF YAP E++ YA RY NE R+YGVID QL +W+A D+YTIAD+A PWLR QG++ D++PNL RW +++ RP
Sbjct: 2 IDVYTWATPNGHKVHIMLEECGLEYKVHPINIGAGDQFGDDFLKISPNNKIPAIVDPDGPDGKPISLFESGAILLYLAGKTGKFLPEDVRGKYDALQWLMFQMGGVGPMLGQAHHFRIYAP-----EQIEYAVNRYTNEARRLYGVIDTQLSKHEWLAGDQYTIADIATFPWLRSWQNQGVELDEYPNLKRWFNEIAERP 196
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A2D6T619_9PROT (Glutathione S-transferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2D6T619_9PROT) HSP 1 Score: 281 bits (719), Expect = 1.670e-93 Identity = 131/200 (65.50%), Postives = 158/200 (79.00%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
ID+YTWPTPNGHKVHIML E +A+ +IP+NI GDQF+PDFLKISPNNKMPA+VDPDGPDG+PI++FES A LIYLA KTG+F+P+D R++Y+VL WLMFQMG VGPMLGQ HHF AYAP E + YA RY NE R+YGVID +L+G+D++A D Y+IADMA MPWLR +QG D FPNL RW + + RP
Sbjct: 2 IDLYTWPTPNGHKVHIMLEETGLAYKVIPVNIGAGDQFEPDFLKISPNNKMPAMVDPDGPDGQPIALFESGAMLIYLAEKTGQFLPSDARQRYEVLCWLMFQMGGVGPMLGQAHHFRAYAP-----EPIPYAVDRYTNEAGRLYGVIDTRLEGRDFLAGD-YSIADMATMPWLRSYERQGQDLADFPNLKRWFEAINDRP 195
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: UPI0019122ABB (Glutathione S-transferase N-terminal domain-containing protein n=2 Tax=Ramlibacter ginsenosidimutans TaxID=502333 RepID=UPI0019122ABB) HSP 1 Score: 280 bits (715), Expect = 1.330e-92 Identity = 127/200 (63.50%), Postives = 154/200 (77.00%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVY+WPTPNGHKVHIML E +A+ IP+NI G+QF+PDFL ISPNNK+PAIVDPDGPDG PIS+FES A L+YLA+KTG+F+PA +R K++VLQWLMFQMG VGPMLGQ HHF YAP E++ YA RY NE R+YGVIDR+L +W+ EY+IAD+A PWLR QGI D++P+L RW D + ARP
Sbjct: 24 IDVYSWPTPNGHKVHIMLEECGLAYRAIPVNIGAGEQFRPDFLAISPNNKIPAIVDPDGPDGAPISLFESGAILVYLASKTGRFLPASDRAKFEVLQWLMFQMGGVGPMLGQAHHFRLYAP-----EKIPYAIDRYTNEARRLYGVIDRRLSQSEWVGGAEYSIADIATFPWLRSWQNQGIVLDEYPHLKRWFDTVAARP 218
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A2E4F5L4_9PROT (Glutathione S-transferase n=1 Tax=Rhodospirillaceae bacterium TaxID=1898112 RepID=A0A2E4F5L4_9PROT) HSP 1 Score: 278 bits (712), Expect = 1.870e-92 Identity = 131/200 (65.50%), Postives = 158/200 (79.00%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVY WPTPNG+K+ IML E + +NI+P+NI +G+QF+PDFLKISPNN+MPAIVDPDGPDG+PIS+FES A LIYLA KTGKFMPAD R +Y+V++WLMFQMG VGPMLGQ HHF YAP E++ YA RY NEG R+YGVIDRQL +D++A EY+IADMA MPWL QG + D +PNL WR+K+ ARP
Sbjct: 2 IDVYYWPTPNGYKITIMLEECGLPYNIVPVNIGKGEQFEPDFLKISPNNRMPAIVDPDGPDGQPISIFESGAILIYLAEKTGKFMPADPRGRYEVMEWLMFQMGGVGPMLGQAHHFRNYAP-----EKIEYAINRYTNEGGRLYGVIDRQLQDRDYLAG-EYSIADMATMPWLLGK-HQGQNYDDYPNLKEWRNKLKARP 194
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: UPI0004242A3D (glutathione binding-like protein n=1 Tax=Ottowia thiooxydans TaxID=219182 RepID=UPI0004242A3D) HSP 1 Score: 275 bits (703), Expect = 4.370e-91 Identity = 128/200 (64.00%), Postives = 151/200 (75.50%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
IDVY+WPTPNGHKVHIML E + + +PINI +GDQF+PDFLKISPNNK+PA++DP+GPDGKPISVFES A L+YLA K +F+P D R +Y VLQWLMFQMG VGPMLGQ HHF YAP E++AYA RY NE R+YGV+DRQL +IA D+Y+IADMAI PWLR QGID FP L W D++ RP
Sbjct: 2 IDVYSWPTPNGHKVHIMLEECGLPYRALPINIGKGDQFQPDFLKISPNNKIPALLDPEGPDGKPISVFESGAILLYLAEKAKRFIPEDPRGRYHVLQWLMFQMGGVGPMLGQAHHFRIYAP-----EKIAYAVDRYTNEAKRLYGVMDRQLRSHTYIAGDDYSIADMAIFPWLRSWQNQGIDWADFPTLKNWFDRINERP 196
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Match: A0A536YAT3_9PROT (Glutathione S-transferase family protein n=3 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A536YAT3_9PROT) HSP 1 Score: 275 bits (703), Expect = 4.520e-91 Identity = 123/200 (61.50%), Postives = 153/200 (76.50%), Query Frame = 1
Query: 7 IDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNNKMPAIVDPDGPDGKPISVFESAACLIYLANKTGKFMPADERKKYDVLQWLMFQMGSVGPMLGQCHHFNAYAPLREPEERLAYAQARYINEGTRIYGVIDRQLDGKDWIAADEYTIADMAIMPWLRDPVKQGIDADKFPNLLRWRDKMWARP 606
ID+YTWPTPNGHK+HIML E + + + PI+I GDQFKPDFL ISPNNK+PA++D GPDGKP ++ ES A L YLA+KTGKF+P D RK++ V+QW+M QMG VGPMLGQ HHF YAP ER+ YA RY NE R+YGV+DRQL +W+A DEYTIADMA MPWLR P +QG++ D+ P++ RWRD++ RP
Sbjct: 2 IDLYTWPTPNGHKIHIMLEETGLEYRVHPIDIGAGDQFKPDFLAISPNNKIPAMIDQRGPDGKPFALAESGAMLFYLASKTGKFLPKDIRKRWQVMQWVMTQMGHVGPMLGQAHHFLGYAP-----ERIEYAMNRYKNEANRLYGVLDRQLAKSEWLACDEYTIADMATMPWLRAPERQGVNIDEHPHVKRWRDRIAERP 196 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100210.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100210.2.1 >prot_L-digitata_M_contig100210.2.1 ID=prot_L-digitata_M_contig100210.2.1|Name=mRNA_L-digitata_M_contig100210.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=202bp MTIDVYTWPTPNGHKVHIMLHEAEIAHNIIPINIQEGDQFKPDFLKISPNback to top mRNA from alignment at L-digitata_M_contig100210:338..943+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100210.2.1 ID=mRNA_L-digitata_M_contig100210.2.1|Name=mRNA_L-digitata_M_contig100210.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=606bp|location=Sequence derived from alignment at L-digitata_M_contig100210:338..943+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100210:338..943+ >mRNA_L-digitata_M_contig100210.2.1 ID=mRNA_L-digitata_M_contig100210.2.1|Name=mRNA_L-digitata_M_contig100210.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=606bp|location=Sequence derived from alignment at L-digitata_M_contig100210:338..943+ (Laminaria digitata LdigPH10_18mv male)back to top |