mRNA_L-digitata_M_contig100201.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A6N7F5A7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F5A7_9PROT) HSP 1 Score: 199 bits (506), Expect = 1.280e-59 Identity = 104/207 (50.24%), Postives = 136/207 (65.70%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRKPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAAL 624
N V + +TL DAK EV+ TGKGSESY DP I+N + GTKFK+++GY+GGG LDL+LER E +G++GPL+S + RKP WL K+R L Q G +VPLLT A N ++R++ +SSRA LGR + APPG+PADR AALRKAF TM D F AD +KRR+ M S E VE + +++ATP +I + K AL
Sbjct: 131 NSGLYVWHTEKPQTLQDAKKFEVILGATGKGSESYMDPTIINAVMGTKFKMILGYRGGGDLDLALERLEIKGQSGPLISVLTRKPHWLAEKKVRYLFQSGSTPHPKLSNVPLLTSLAENAEDRRLFAFLSSRADLGRTYSAPPGLPADRTAALRKAFADTMKDPAFLADAEKRRIDVMPESAEFVEKKIAELMATPPSVIARAKKAL 337
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A6N7F3C0_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7F3C0_9PROT) HSP 1 Score: 199 bits (505), Expect = 2.020e-59 Identity = 102/209 (48.80%), Postives = 138/209 (66.03%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRKPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAALGF 630
N V STP KTL D K HE++ +G+GSE++ DP ++N + GTKFK+++GYKGGG +DL+LERGE G AGP +S R W+ + KIR L Q G ++ DVPLLTE A D++ I +SSRAA+GR VA PGVPADR+AALRKA+ T++D + + K+R L + +S EEVE V+++LATP + K K ALG
Sbjct: 134 NSGIYVWHSTPPKTLADVKKHEIIIGASGRGSETFTDPTLINAVLGTKFKVILGYKGGGDMDLALERGEVNGDAGPAISVFNRHRHWVDNNKIRFLVQSGEKRHPLLPDVPLLTELAETPDQKAIFAFLSSRAAIGRTLVASPGVPADRLAALRKAYRDTVHDPAYVKEAKRRGLDVIPASHEEVETLVREVLATPPETVRKVKTALGI 342
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A6N7H031_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7H031_9HYPH) HSP 1 Score: 169 bits (427), Expect = 1.320e-47 Identity = 102/223 (45.74%), Postives = 128/223 (57.40%), Query Frame = 1
Query: 7 GSFAVLGSTPVKTLM-------------DAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVR-KPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAALGFG 633
G F LGST LM D E++ TG GS +Y +N + GTKFK+VMGYK ++DL++ERGE Q R G L+ V + +P W+ K+ +L Q G K A + DVPL+ E ARND+ERQIL LISS AALGRPF PP VPA+RVAALR AF ATM D + A + RL S E V V + TP ++ K +AALG G
Sbjct: 126 GKFIWLGSTGFANLMTMAWHTAGFNTIKDVFERELLTGATGVGSGTYMYTNAMNAILGTKFKMVMGYKDSASVDLAIERGEVQARGGMTLTEVKQERPHWISEKKVVMLVQTGAEKDAEYPDVPLMHELARNDEERQILELISSPAALGRPFFLPPDVPAERVAALRTAFAATMKDPDYIATGNRLRLDMNPLSAERVTQLVNATVYTPSHIVSKARAALGTG 348
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A7C9KN60_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9KN60_9PROT) HSP 1 Score: 169 bits (427), Expect = 1.800e-47 Identity = 92/208 (44.23%), Postives = 129/208 (62.02%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVR-KPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAAL 624
N V +T VKT+ DAK V+ GTG S S P ++N + GTKF+++MGY+ DL++ERGE QGRAG + ++ + EW+K+ KI ILAQ+G K GFE +PL+TE A++ R +L + LGRPF+ PGVPADRVAALR +F ATM D AD KK RL +SG++++ V+ M+ ++ + KAAL
Sbjct: 136 NSMVFVWHTTGVKTIQDAKAKSVIMGGTGAASNSVRYPAMLNNVLGTKFRVIMGYRSTNQADLAMERGEVQGRAGATFNTMLATQGEWIKTDKINILAQIGPAKEPGFEKIPLVTELAKDKASRDVLQVFCDDIGLGRPFMVAPGVPADRVAALRTSFDATMKDAALLADAKKSRLDISPTSGDKIQKLVENMIRMSPDVLTRVKAAL 343
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A7C9GGX5_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9GGX5_9PROT) HSP 1 Score: 167 bits (424), Expect = 4.920e-47 Identity = 93/208 (44.71%), Postives = 129/208 (62.02%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLL-SWVVRKPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAAL 624
N + V + VKTL DA E++ GTG GS + P I+N + GTKFK++MGY+ ++L++ERGE QGRAG S + R +W+K K+ IL Q+G +K F+ VPLLT+FA++ R++L L S LGRPF+ PGVPADRVAALR +F ATM D D KK L SG E++ V+ ++ T ++ +TKAAL
Sbjct: 136 NSTVYVWHTHGVKTLQDAMKKEIIMGGTGAGSYTVLYPIILNNLLGTKFKVIMGYRSATQVNLAMERGEVQGRAGNNFNSLMARDAQWVKDNKLSILVQIGQKKDPDFQSVPLLTDFAKDKASREVLQLFSDEVELGRPFLTTPGVPADRVAALRASFDATMKDPKLLEDAKKSGLDIAPKSGAELQKLVEGIINTSDDIVARTKAAL 343
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A6N7FCR7_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A6N7FCR7_9PROT) HSP 1 Score: 165 bits (418), Expect = 2.390e-46 Identity = 89/206 (43.20%), Postives = 128/206 (62.14%), Query Frame = 1
Query: 16 AVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRKPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRA-ALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAALGF 630
AV P ++L +AK EV+ +G G E+Y P I NT+ GTKF+ V GY G A+ ++++GE GR G +SW V P ++K KI++LAQ G+RK DVPL++ FARNDD+R I+ L+ + + R +APPGVP DRV ALR+AF ATM D AD KR + S+GE VE+ V ++++ +I++ K LG+
Sbjct: 140 AVHKDAPAQSLEEAKMVEVIMGNSGIGDETYVMPSIANTLLGTKFRFVSGYPGTAAITAAMDKGEVHGRGGSWISWKVLNPHFIKEKKIKLLAQGGLRKDPDLPDVPLISGFARNDDDRAIVRLVVALPIGISRAIMAPPGVPKDRVQALRRAFDATMADPDLLADANKRSVAISPSTGEVVESRVAEIISATPEMIERAKVILGY 345
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A7C9GIP1_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A7C9GIP1_9PROT) HSP 1 Score: 165 bits (417), Expect = 5.400e-46 Identity = 88/203 (43.35%), Postives = 126/203 (62.07%), Query Frame = 1
Query: 19 VLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRK-PEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAAL 624
++ S VKT+ DA+ E++ GTG GS + P I+N + GTKFK+++GY+ G +DL++ERGE Q R G R P+W+K+GK+ L QVG+ G + VPL+ + A N ++++IL S ALGRP++APPGVPADRVAALR AF A D F ++KKR L +EV V ++ TP+PLI K + +
Sbjct: 135 IVSSAGVKTIADARKKEILSGGTGAGSGTVLYPTILNNLLGTKFKVIIGYRSAGDVDLAMERGEVQARHGYSYGSFERAHPDWIKTGKVNFLYQVGLSDKMGPKGVPLMLDLAENPEQKEILRFFSRTVALGRPYLAPPGVPADRVAALRAAFTAMTKDPQFVEEMKKRHLDLFPQDWKEVTENVTALINTPKPLIAKAMSVM 337
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A523G666_9PROT (Uncharacterized protein n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A523G666_9PROT) HSP 1 Score: 164 bits (416), Expect = 6.770e-46 Identity = 90/204 (44.12%), Postives = 129/204 (63.24%), Query Frame = 1
Query: 16 AVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRK-PEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAAL 624
AV VKT+ DAKN EV+ GTG GS + P I+N + GT+F++V+GY+ +DL++ERGE R+G + R+ P+W+K+ K+ QVGV G + VPLL + A+N D+R+I L S ALGRP++ PGVPADR+AALRKAF AT+ D+ F A KKR+ ++ ++V A V M+ TP ++ KAA+
Sbjct: 134 AVWHKAGVKTIDDAKNKEVISGGTGAGSGTVIYPMIMNKLLGTRFRVVIGYRSASNIDLAMERGEVFARSGYSYGSLARRHPDWIKTNKVFFPVQVGVDPARGPKGVPLLIDLAKNKDQRKIFELFSGTVALGRPYLTTPGVPADRLAALRKAFAATLADKAFLAAQKKRKFDLFPATADQVAAIVAAMINTPAGIVKMAKAAM 337
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A6N7GNW1_9HYPH (Uncharacterized protein n=1 Tax=Hyphomicrobiales bacterium TaxID=1909294 RepID=A0A6N7GNW1_9HYPH) HSP 1 Score: 160 bits (406), Expect = 1.680e-44 Identity = 90/211 (42.65%), Postives = 128/211 (60.66%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAGPLLSWVVRKP-EWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDKTKAALGFG 633
N + V +T VK+L DA EV+ GTG S + P ++N++ GTKFKLV GYK + +++ERGE QGRAG + + + +WLK+GKI +LAQVG+ + F VPL+TEFA+ D+ RQIL S+ +GRPFV PGVPA+RV LR+AF + D+ F+ D KK + G ++ V + TP ++ K KAA+ G
Sbjct: 138 NSTVYVWHTTGVKSLEDAMQREVLMGGTGVSSYNVIYPTVLNSLVGTKFKLVTGYKSTTEIAIAMERGEVQGRAGNNFNSLTSEHGDWLKTGKINLLAQVGLERDPDFPKVPLITEFAKTDEARQILRFFSTDVVIGRPFVTSPGVPAERVVLLRQAFDRMLKDKAFREDAKKAGIEISPVGGVAIQKIVADFMNTPADVVAKAKAAMEPG 348
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Match: A0A1Q4BLF9_9HYPH (Uncharacterized protein n=1 Tax=Rhizobiales bacterium 62-17 TaxID=1895810 RepID=A0A1Q4BLF9_9HYPH) HSP 1 Score: 159 bits (401), Expect = 6.700e-44 Identity = 83/203 (40.89%), Postives = 124/203 (61.08%), Query Frame = 1
Query: 4 NGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFKLVMGYKGGGALDLSLERGESQGRAG-PLLSWVVRKPEWLKSGKIRILAQVGVRKFAGFEDVPLLTEFARNDDERQILGLISSRAALGRPFVAPPGVPADRVAALRKAFVATMNDEGFQADVKKRRLLNMWSSGEEVEATVKKMLATPQPLIDK 609
N + AV T VKT DA+ EVV TG + S Q+ N + GTKFK+V GY GG ++L++E GE GRA P +W +P+W++ GKI ++AQ+G+ + DVPLLT+ ND +R ++ L+S+ + +GRP PGVP VA LRKAF A + D+ F + + +L SGEE++ V+ ++ATP+P+ D+
Sbjct: 132 NNTIAVWHGTGVKTFEDARRREVVIGATGPNTSSQM-AQLTNALLGTKFKIVTGYPGGNDINLAMENGEVGGRASAPWATWKATRPDWVRDGKIVVIAQIGLTRAPDLPDVPLLTDLTGNDGDRAVVKLVSAPSTIGRPVFTAPGVPTPVVATLRKAFTAMVQDKTFNEEAAREKLDINPVSGEELQKIVEDLVATPKPVADR 333 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100201.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100201.2.1 >prot_L-digitata_M_contig100201.2.1 ID=prot_L-digitata_M_contig100201.2.1|Name=mRNA_L-digitata_M_contig100201.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=213bp MNGSFAVLGSTPVKTLMDAKNHEVVYSGTGKGSESYYDPQIVNTMFGTKFback to top mRNA from alignment at L-digitata_M_contig100201:298..936- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100201.2.1 ID=mRNA_L-digitata_M_contig100201.2.1|Name=mRNA_L-digitata_M_contig100201.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=639bp|location=Sequence derived from alignment at L-digitata_M_contig100201:298..936- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100201:298..936- >mRNA_L-digitata_M_contig100201.2.1 ID=mRNA_L-digitata_M_contig100201.2.1|Name=mRNA_L-digitata_M_contig100201.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=639bp|location=Sequence derived from alignment at L-digitata_M_contig100201:298..936- (Laminaria digitata LdigPH10_18mv male)back to top |