mRNA_L-digitata_M_contig100182.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: D8LBJ6_ECTSI (Aspartate/glutamate/uridylate kinase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBJ6_ECTSI) HSP 1 Score: 92.8 bits (229), Expect = 4.300e-22 Identity = 47/52 (90.38%), Postives = 48/52 (92.31%), Query Frame = 1
Query: 1 RWLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
RWLLLAGETEGVFG DGACV EIS +LPSIEGSLGGSRGTDVTGGMASKVR
Sbjct: 74 RWLLLAGETEGVFGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVR 125
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A6H5JTJ8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTJ8_9PHAE) HSP 1 Score: 90.5 bits (223), Expect = 1.040e-20 Identity = 46/52 (88.46%), Postives = 47/52 (90.38%), Query Frame = 1
Query: 1 RWLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
RWLLLAGETEGV G DGACV EIS +LPSIEGSLGGSRGTDVTGGMASKVR
Sbjct: 130 RWLLLAGETEGVLGGDGACVPEISLESLPSIEGSLGGSRGTDVTGGMASKVR 181
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A7C3H372_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C3H372_9CHLR) HSP 1 Score: 70.9 bits (172), Expect = 2.310e-13 Identity = 35/51 (68.63%), Postives = 39/51 (76.47%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
WLLLAGETEGV G + I P TLP +E +LGGSRGTDVTGGMA+KVR
Sbjct: 171 WLLLAGETEGVLDLAGQVIPRIMPETLPQVEAALGGSRGTDVTGGMAAKVR 221
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A6L3F9Z2_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A6L3F9Z2_9CHLR) HSP 1 Score: 63.5 bits (153), Expect = 1.200e-10 Identity = 32/50 (64.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKV 153
WLLLAGET GV +G + +I+ +LP I +LGGSRGTDVTGGMASKV
Sbjct: 172 WLLLAGETAGVLDQNGTIIPKITRESLPEIASALGGSRGTDVTGGMASKV 221
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A2E0ZCB3_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineaceae bacterium TaxID=2024896 RepID=A0A2E0ZCB3_9CHLR) HSP 1 Score: 62.4 bits (150), Expect = 3.850e-10 Identity = 32/51 (62.75%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
WLLLAGET GV+ + ++ IS A IE +LGGSRGTDVTGGMASKV+
Sbjct: 198 WLLLAGETTGVYDLEEQVISRISRANYAEIEAALGGSRGTDVTGGMASKVQ 248
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A7Y5Q9D0_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium TaxID=2052143 RepID=A0A7Y5Q9D0_9CHLR) HSP 1 Score: 62.0 bits (149), Expect = 4.370e-10 Identity = 31/50 (62.00%), Postives = 38/50 (76.00%), Query Frame = 1
Query: 7 LLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
+LL G+ +GVF GA + I+PA LP IE +LGGS GTDVTGGMA+KVR
Sbjct: 173 ILLLGDVDGVFDQTGAIIPVITPALLPQIEAALGGSAGTDVTGGMAAKVR 222
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A0S8AVD4_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Anaerolineae bacterium SG8_19 TaxID=1703386 RepID=A0A0S8AVD4_9CHLR) HSP 1 Score: 60.8 bits (146), Expect = 1.210e-9 Identity = 31/50 (62.00%), Postives = 36/50 (72.00%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKV 153
WLLLAGETEGV DG + I+ + + I+ L GSRGTDVTGGMASKV
Sbjct: 174 WLLLAGETEGVLSDDGRIIPLITKSNIGQIQNQLSGSRGTDVTGGMASKV 223
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A160T015_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Candidatus Promineofilum breve TaxID=1806508 RepID=A0A160T015_9CHLR) HSP 1 Score: 60.5 bits (145), Expect = 1.640e-9 Identity = 31/50 (62.00%), Postives = 37/50 (74.00%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKV 153
W LLAGETEGV +G + I+ + LPS +LGGSRGTDVTGGMA+KV
Sbjct: 172 WFLLAGETEGVLDGEGNLIPLITASNLPSYLPALGGSRGTDVTGGMAAKV 221
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A3M1ZMT5_9CHLR (Isopentenyl phosphate kinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3M1ZMT5_9CHLR) HSP 1 Score: 59.7 bits (143), Expect = 3.120e-9 Identity = 31/51 (60.78%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
WLLLAGETEGV +G + I P I LGGSRGTDVTGGMA+KV+
Sbjct: 170 WLLLAGETEGVLDDEGRVIPHIHPDNFAQIAPLLGGSRGTDVTGGMAAKVQ 220
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Match: A0A2G6GE47_9CHLR (Isopentenyl phosphate kinase n=2 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A2G6GE47_9CHLR) HSP 1 Score: 58.2 bits (139), Expect = 1.140e-8 Identity = 30/51 (58.82%), Postives = 35/51 (68.63%), Query Frame = 1
Query: 4 WLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKVR 156
WLLLAGE GV G V +I+ T I+ +LGGSRGTDVTGGM SKV+
Sbjct: 171 WLLLAGEVPGVLDGQGEVVPKITAVTFDDIKPALGGSRGTDVTGGMTSKVQ 221 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100182.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100182.1.1 >prot_L-digitata_M_contig100182.1.1 ID=prot_L-digitata_M_contig100182.1.1|Name=mRNA_L-digitata_M_contig100182.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=52bp RWLLLAGETEGVFGADGACVAEISPATLPSIEGSLGGSRGTDVTGGMASKback to top mRNA from alignment at L-digitata_M_contig100182:614..769+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100182.1.1 ID=mRNA_L-digitata_M_contig100182.1.1|Name=mRNA_L-digitata_M_contig100182.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=156bp|location=Sequence derived from alignment at L-digitata_M_contig100182:614..769+ (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100182:614..769+ >mRNA_L-digitata_M_contig100182.1.1 ID=mRNA_L-digitata_M_contig100182.1.1|Name=mRNA_L-digitata_M_contig100182.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=156bp|location=Sequence derived from alignment at L-digitata_M_contig100182:614..769+ (Laminaria digitata LdigPH10_18mv male)back to top |