mRNA_L-digitata_M_contig100137.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A7Y2U4D3_9GAMM (Phosphoglucomutase, alpha-D-glucose phosphate-specific n=2 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A7Y2U4D3_9GAMM) HSP 1 Score: 162 bits (409), Expect = 2.460e-49 Identity = 80/109 (73.39%), Postives = 95/109 (87.16%), Query Frame = 1
Query: 4 DRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEA 330
+RFG+P+YE +DAPA+PEQK VLK LSPEQV+ATELAG+ I A+LT+AP N AAIGGLKVV+E+GWFAARPSGTEN+YKIY ESF G +HLKRIQEEA+SIV A +A
Sbjct: 19 ERFGSPMYERLDAPATPEQKTVLKNLSPEQVTATELAGEKITARLTRAPGNDAAIGGLKVVSENGWFAARPSGTENVYKIYAESFMGRDHLKRIQEEARSIVANALGDA 127
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A3D1R2Y6_9DELT (Alpha-D-glucose phosphate-specific phosphoglucomutase (Fragment) n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A3D1R2Y6_9DELT) HSP 1 Score: 164 bits (414), Expect = 2.340e-48 Identity = 84/112 (75.00%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEAGV 336
T+RFGAPVYE IDA A+ QK+VLKKLSPE V A LAG+ I AKLT AP NGAAIGGLKVV E+GWFAARPSGTE++YKIY ESFKGPEHLK+IQ+EAQ++V AAF AGV
Sbjct: 149 TERFGAPVYERIDAAANSAQKNVLKKLSPELVKAETLAGEPIQAKLTNAPGNGAAIGGLKVVAENGWFAARPSGTEDVYKIYAESFKGPEHLKQIQKEAQAMVDAAFKAAGV 260
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A7V9AH10_9BACT (Alpha-D-glucose phosphate-specific phosphoglucomutase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7V9AH10_9BACT) HSP 1 Score: 164 bits (414), Expect = 2.920e-48 Identity = 81/111 (72.97%), Postives = 95/111 (85.59%), Query Frame = 1
Query: 4 DRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEAGV 336
+RFG+P+YE +DAPA+P QK LK LSPE V A ELAG+ I+AKLT+AP N A+IGGLKVVTE+GWFAARPSGTEN+YKIY ESF+G EHL+RIQEEAQ+IV AAF AGV
Sbjct: 158 ERFGSPLYERMDAPATPAQKKALKGLSPEMVEADELAGERILAKLTRAPGNDASIGGLKVVTENGWFAARPSGTENVYKIYAESFRGAEHLRRIQEEAQAIVNAAFRRAGV 268
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A3N5KB73_9PROT (Phosphoglucomutase, alpha-D-glucose phosphate-specific (Fragment) n=1 Tax=Zetaproteobacteria bacterium TaxID=2026807 RepID=A0A3N5KB73_9PROT) HSP 1 Score: 160 bits (404), Expect = 4.210e-47 Identity = 82/112 (73.21%), Postives = 95/112 (84.82%), Query Frame = 1
Query: 1 TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEAGV 336
T RFGAP+YE IDAPA+ QK VLK+LS EQVSATELAG+ IVAKLT+AP GAAIGGLKVVTE+GWFAARPSGTE++YKIY ESF G H+ R+QEEA+++V AAF AGV
Sbjct: 128 TRRFGAPIYERIDAPATSRQKAVLKQLSAEQVSATELAGEKIVAKLTRAPEGGAAIGGLKVVTENGWFAARPSGTEDVYKIYAESFLGSAHMARLQEEARALVGAAFKAAGV 239
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A532BY50_9BACT (Alpha-D-glucose phosphate-specific phosphoglucomutase n=1 Tax=Nitrospira sp. TaxID=70125 RepID=A0A532BY50_9BACT) HSP 1 Score: 162 bits (411), Expect = 7.270e-47 Identity = 81/108 (75.00%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 1 TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFA 324
T G PVYE IDAPA+PEQK L KLSP+QVSATELAGD IVAK T AP NGA+IGGLKVVTE GWFAARPSGTE++YK+Y ESFKG +HLKRIQEEAQ+++ AFA
Sbjct: 243 TKELGEPVYERIDAPATPEQKATLSKLSPDQVSATELAGDTIVAKQTVAPGNGASIGGLKVVTEQGWFAARPSGTEDVYKLYAESFKGKDHLKRIQEEAQALIAKAFA 350
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: X0RXI1_9ZZZZ (PGM_PMM_IV domain-containing protein (Fragment) n=1 Tax=marine sediment metagenome TaxID=412755 RepID=X0RXI1_9ZZZZ) HSP 1 Score: 154 bits (390), Expect = 2.540e-46 Identity = 75/109 (68.81%), Postives = 96/109 (88.07%), Query Frame = 1
Query: 10 FGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEAGV 336
FG+PVYE +D A+ EQ+ VL+KLSP Q++A++LAG+ I+AKLT+AP NGA+IGGLKVVTE+GWFAARPSGTE+IYK+Y ESFKG EHL +IQEEA +I++AAF+ AGV
Sbjct: 28 FGSPVYERLDEAANLEQRAVLQKLSPNQITASDLAGEEIIAKLTEAPGNGASIGGLKVVTENGWFAARPSGTEDIYKVYAESFKGKEHLTQIQEEACAIIRAAFSSAGV 136
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A2V7SQ58_9BACT (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A2V7SQ58_9BACT) HSP 1 Score: 164 bits (416), Expect = 5.370e-46 Identity = 78/108 (72.22%), Postives = 95/108 (87.96%), Query Frame = 1
Query: 1 TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFA 324
T+RFGAP YE IDAPASPEQK VL +L+PE V A+ELAG+AI+A+LT AP NGA+IGGLK+VTE+GWFAARPSGTEN+YK+Y ESFKG +HL+RIQ+EA+ I+ AFA
Sbjct: 439 TERFGAPAYERIDAPASPEQKSVLSRLTPEGVRASELAGEAIIARLTSAPGNGASIGGLKIVTENGWFAARPSGTENVYKLYAESFKGTDHLRRIQDEARQIISDAFA 546
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A0S6VTS8_9BACT (Phosphoglucomutase, alpha-D-glucose phosphate-specific n=1 Tax=Candidatus Moduliflexus flocculans TaxID=1499966 RepID=A0A0S6VTS8_9BACT) HSP 1 Score: 153 bits (387), Expect = 6.830e-46 Identity = 75/105 (71.43%), Postives = 92/105 (87.62%), Query Frame = 1
Query: 7 RFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAF 321
+FG+P+YE +DAPA+ EQK +L+KLSP+ V+A ELAG+ I+AKLT AP N AA+GGLKVVTE+GWFAARPSGTE++YKIY ESFKG EHL RIQ+EAQ IV+AAF
Sbjct: 26 QFGSPIYERMDAPANREQKAILQKLSPDMVTAQELAGEPILAKLTNAPGNNAALGGLKVVTENGWFAARPSGTEDVYKIYAESFKGAEHLCRIQQEAQLIVKAAF 130
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A7X8CDH9_9DELT (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7X8CDH9_9DELT) HSP 1 Score: 164 bits (415), Expect = 7.710e-46 Identity = 83/110 (75.45%), Postives = 95/110 (86.36%), Query Frame = 1
Query: 7 RFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFAEAGV 336
+FG PVYE ID PA+PEQK VLKKLSP+Q+SA+ L G+ I+AKLT AP NGAAIGGLKV+TE+GWFAARPSGTE+IYKIYTESFKG EHL +IQEEA+SIV AF AGV
Sbjct: 441 QFGNPVYERIDVPATPEQKAVLKKLSPDQISASTLGGETILAKLTAAPGNGAAIGGLKVITENGWFAARPSGTEDIYKIYTESFKGKEHLLKIQEEARSIVSNAFKIAGV 550
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Match: A0A7S8IZ55_9BACT (Phosphoglucomutase (alpha-D-glucose-1,6-bisphosphate-dependent) n=1 Tax=Candidatus Nitrospira kreftii TaxID=2652173 RepID=A0A7S8IZ55_9BACT) HSP 1 Score: 164 bits (414), Expect = 1.050e-45 Identity = 80/108 (74.07%), Postives = 91/108 (84.26%), Query Frame = 1
Query: 1 TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPANGAAIGGLKVVTEDGWFAARPSGTENIYKIYTESFKGPEHLKRIQEEAQSIVQAAFA 324
T G PVYE IDAPA+PEQK +L KLSP+QV ATELAGD +VA LTKAP NGAAIGGLKVVTE+GWFAARPSGTE++YK+Y ESFKG EHLKRIQEEAQ+++ A
Sbjct: 438 TKELGEPVYERIDAPATPEQKTILSKLSPDQVKATELAGDKVVAMLTKAPGNGAAIGGLKVVTENGWFAARPSGTEDVYKLYAESFKGKEHLKRIQEEAQALISKVLA 545 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100137.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig100137.2.1 >prot_L-digitata_M_contig100137.2.1 ID=prot_L-digitata_M_contig100137.2.1|Name=mRNA_L-digitata_M_contig100137.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=114bp TDRFGAPVYEHIDAPASPEQKDVLKKLSPEQVSATELAGDAIVAKLTKAPback to top mRNA from alignment at L-digitata_M_contig100137:603..944- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig100137.2.1 ID=mRNA_L-digitata_M_contig100137.2.1|Name=mRNA_L-digitata_M_contig100137.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=342bp|location=Sequence derived from alignment at L-digitata_M_contig100137:603..944- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig100137:603..944- >mRNA_L-digitata_M_contig100137.2.1 ID=mRNA_L-digitata_M_contig100137.2.1|Name=mRNA_L-digitata_M_contig100137.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=342bp|location=Sequence derived from alignment at L-digitata_M_contig100137:603..944- (Laminaria digitata LdigPH10_18mv male)back to top |