mRNA_L-digitata_M_contig100136.1.1 (mRNA) Laminaria digitata LdigPH10_18mv male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_L-digitata_M_contig100136.1.1
Unique NamemRNA_L-digitata_M_contig100136.1.1
TypemRNA
OrganismLaminaria digitata LdigPH10_18mv male (Laminaria digitata LdigPH10_18mv male (Oarweed))
Homology
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A3M2K988_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Calditrichaeota bacterium TaxID=2212469 RepID=A0A3M2K988_9BACT)

HSP 1 Score: 185 bits (469), Expect = 1.610e-52
Identity = 95/186 (51.08%), Postives = 132/186 (70.97%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMP---QQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            E+WQ V+ LF  AL  P  + +  LKEAC  + +L+ EV +LL+A + T  LL +     A D    +D +P   Q+IGPY ++ ELG GGMG V+ A+R DGQFEQ VA+K+++ G+AT  I++RF  ERQILA+LQHP+IARLLDGGI + G PFFAM+++ G PITAYC+ H+ SI++R++LF
Sbjct:    4 EQWQNVQDLFEKALTKPPSERENFLKEACGDNSQLYREVASLLQADSDTHDLLKS----PAFDTFGFMDSLPHSGQRIGPYRVIEELGMGGMGAVYLAERADGQFEQQVALKLIKTGMATQQILKRFQSERQILARLQHPNIARLLDGGITDDGAPFFAMEYIQGEPITAYCDRHRLSIEERLKLF 185          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A7Y2C969_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Rhodothermales bacterium TaxID=2306054 RepID=A0A7Y2C969_9BACT)

HSP 1 Score: 174 bits (440), Expect = 8.440e-50
Identity = 90/183 (49.18%), Postives = 119/183 (65.03%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            ERW+ V  LF AA     ++  + L E CQ D  +  EV ALL A  +   LLD  A    A L  +LD     +GPY I+ ELG GGMG V+ A+R DG+FEQ VA+K+++ G+ +  I+RRF  ERQILA+LQHP+IARLLDGGI   G P+FAM++V+G PI  YC+ H+ +I QR+ LF
Sbjct:    5 ERWKRVNALFEAAWQLEPEKQQSFLSEQCQGDAAMMEEVKALLVADREASSLLDGVAVGALA-LESELDRSGDLVGPYRIVSELGVGGMGAVYLAERSDGEFEQQVALKLIKRGMDSEQILRRFRSERQILARLQHPNIARLLDGGITAEGQPYFAMEYVEGEPIDRYCDDHRLTIDQRLALF 186          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A523ITE8_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Caldithrix sp. TaxID=1962856 RepID=A0A523ITE8_9BACT)

HSP 1 Score: 179 bits (453), Expect = 9.880e-49
Identity = 88/183 (48.09%), Postives = 128/183 (69.95%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            ERWQ ++ LF   L+  +D+ +  LK+AC  D EL+ EV +LL+A A T  LLD  A + A D  K  +     IGPY I+ E+G GGMG V+ A+R +G FEQ VA+K+++PG+ +  I+ RF  ERQILA+L HP+IARLLDGG+++ G P+FAM++++G PI  YC+ H+ SI++R++LF
Sbjct:   28 ERWQKIQSLFEQTLELVSDKRNAFLKQACADDRELYKEVISLLEADANTHSLLDGLALD-AVDFAKYFNLEGHHIGPYKIVREIGRGGMGAVYLAERAEGDFEQQVAVKLIKPGMDSRQILERFQSERQILARLMHPNIARLLDGGVNKDGLPYFAMEYLEGEPIGDYCDKHKLSIEKRLELF 209          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A3M2EGE8_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=Bacteroidetes bacterium TaxID=1898104 RepID=A0A3M2EGE8_9BACT)

HSP 1 Score: 172 bits (437), Expect = 5.950e-48
Identity = 95/192 (49.48%), Postives = 130/192 (67.71%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLL-----DAFAAEQ----AADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            +RW+ ++RLF AALD P D+ D  L++AC  DLELF+ V ALL A A+  G L       FAA      AA+L +  DE P QIGPY IL ELG GGMG V+ A+R D  + Q VA+K++R G+ +  I+RRF +ER +LA+LQHP+IARLLDGG  E G P+  M++V+G PI  YC+  + S+++R++LF
Sbjct:    7 DRWKRIDRLFEAALDQPPDRRDAFLRQACGEDLELFDAVCALL-ADAEVAGRLLGESVTDFAAALLPGLAAELARPPDEGPAQIGPYRILDELGRGGMGVVYLAERADVPYRQPVALKLVRRGMDSEEILRRFRYERLLLARLQHPNIARLLDGGQAEDGRPYLVMEYVEGEPIDVYCDRRRLSVEERLRLF 197          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A3A0DWH7_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A3A0DWH7_9BACT)

HSP 1 Score: 168 bits (426), Expect = 2.490e-47
Identity = 89/183 (48.63%), Postives = 120/183 (65.57%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            +RW  V+ LF AAL+Y  ++ +  L++AC +D EL  EV ALL+A A+   LL A  +    D+ +      +QIG Y IL ++G GGMG V+ A R DGQFEQ VA+K+++ GL +  I++RF  ERQILA LQHP IARLLDGG  + G PFF M++VDG PI  YC+ HQ  +  R+ LF
Sbjct:    4 QRWNKVQELFEAALEYQPEEREVFLRKACSNDPELHREVAALLEADAQPHSLL-ANMSGVGMDVSEVFSLEGKQIGAYRILKQIGAGGMGNVYLAGRADGQFEQHVALKLIKLGLRSEEILKRFQSERQILAHLQHPSIARLLDGGRTDDGLPFFTMEYVDGAPINRYCDDHQLPVDARLALF 185          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A1V0DCL6_9BACT (Non-specific serine/threonine protein kinase n=2 Tax=Bacteroidetes TaxID=976 RepID=A0A1V0DCL6_9BACT)

HSP 1 Score: 173 bits (439), Expect = 7.230e-47
Identity = 87/181 (48.07%), Postives = 127/181 (70.17%), Query Frame = 1
Query:    7 WQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            W+ V+ LF AAL++  D+    L+ AC  D  L  +V +LL+A A+   LLD  A + A D+ + L  + Q +GPY +L ++G+GGMG V+ A+R DGQFEQ VA+K+++ G+ +  I+RRF  ERQILA+L+HPHIARLLDGG+ + G P+FAM++V+G PI  YC+T + SI +R+ LF
Sbjct:    6 WERVQALFEAALEHEEDERAAFLEAACGEDATLRWDVWSLLEADARAHTLLDGVALD-AVDVEEMLSRVGQLVGPYRLLRQIGQGGMGAVYLAERADGQFEQRVALKLIKRGMDSEQILRRFAAERQILARLEHPHIARLLDGGLTDDGRPYFAMEYVEGEPIDVYCDTRRLSIDERLALF 185          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: UPI0003B639AE (tetratricopeptide repeat-containing serine/threonine-protein kinase n=1 Tax=Salisaeta longa TaxID=503170 RepID=UPI0003B639AE)

HSP 1 Score: 171 bits (434), Expect = 3.540e-46
Identity = 90/187 (48.13%), Postives = 125/187 (66.84%), Query Frame = 1
Query:    4 RWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQA---ADLLKDLDEMP---QQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQL 546
            RW  ++ LF +AL+      D  L+ AC  D +L  E+ +LL A A    LLD  A +      DLL  L  +P   +++GPY I+  LG GGMG VF A R DGQFEQ VA+K++R G+ ++S+++RF  ERQILA+LQHPHIA+LLDGG+ E GHP+FAM++VDG+P+  YC  H  S+++RI+L
Sbjct:    5 RWSQIQTLFESALERAPADRDAFLRTACTGDPDLLAELRSLLAADAAAHPLLDGLALDAIRLPTDLLP-LGILPAEGERVGPYRIVRPLGHGGMGAVFLAARTDGQFEQRVALKLIRGGIFSTSVVQRFQRERQILARLQHPHIAQLLDGGLTEDGHPYFAMEYVDGVPLDRYCTRHGASVEERIRL 190          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A6A0HWI6_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A6A0HWI6_9BACT)

HSP 1 Score: 171 bits (432), Expect = 6.960e-46
Identity = 88/183 (48.09%), Postives = 124/183 (67.76%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            +RW  V+ LF AAL++  ++ D  L++AC ++ EL  EV ALL+A A+   LL A  +    D+ +      +QIG Y I+ ++G GGMG V+ A R DGQFEQ VA+K+++ GL +  I++RF  ERQILA LQHP+IARLLDGG  + G PFF M++VDG PI  YC+ HQ S+ +R++LF
Sbjct:   29 QRWNKVQELFEAALEHQPEERDVFLRKACSNEPELHREVAALLEADAQPHSLL-ANMSGVGMDVSEVFSLEGKQIGAYRIIKQIGAGGMGNVYLAGRADGQFEQHVALKLIKLGLRSEEILKRFQSERQILAHLQHPNIARLLDGGRTDDGLPFFTMEYVDGAPINRYCDDHQLSVDERLELF 210          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A7Y5G3R6_9BACT (Non-specific serine/threonine protein kinase (Fragment) n=1 Tax=candidate division KSB1 bacterium TaxID=2172550 RepID=A0A7Y5G3R6_9BACT)

HSP 1 Score: 168 bits (426), Expect = 1.010e-45
Identity = 89/183 (48.63%), Postives = 123/183 (67.21%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            +RW  V+ LF AAL++  ++ D  L++AC +D EL  EV ALL+A A+   LL A  +    D+ +      +QI  Y I+ ++G GGMG V+ A R DGQFEQ VA+K+++ GL +  I+RRF  ERQILA LQHP+IARLLDGG  + G PFF M++VDG PI  YC+ HQ S+ +R++LF
Sbjct:    4 QRWIKVQELFEAALEHQPEERDVFLRKACSNDPELHREVAALLEADAQPHSLL-ANMSGVGMDVSEVFSLEGKQIRAYRIIKQIGAGGMGNVYLAGRADGQFEQKVALKLIKLGLRSEEILRRFQSERQILAHLQHPNIARLLDGGRTDDGLPFFTMEYVDGAPINRYCDDHQLSVDERLELF 185          
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Match: A0A838WD82_9BACT (Non-specific serine/threonine protein kinase n=1 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A838WD82_9BACT)

HSP 1 Score: 169 bits (429), Expect = 1.360e-45
Identity = 84/183 (45.90%), Postives = 121/183 (66.12%), Query Frame = 1
Query:    1 ERWQTVERLFMAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQAADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKVLRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHVDGLPITAYCNTHQFSIKQRIQLF 549
            ER++  + +F AALD P  + +  ++ A   D  ++  V  LL+AH + DG L A AAE A+ L   +   P+++GPY I  E+G GGMG V+ A+RDD QF Q VA+K++R    T  +++RFL ERQILA L+HPHIARL+DGGI   G P+FAM++V+G PI  YC+  Q  + +R++LF
Sbjct:    7 ERFRQADAIFDAALDLPTHEREAYIEGAYAGDPGMYATVQRLLRAHTRADGFLAAPAAEFASVLSHPIPRHPERVGPYRIAREIGHGGMGAVYLAERDDAQFRQRVALKLVRADPGTDYLVQRFLEERQILASLEHPHIARLVDGGITPEGLPWFAMEYVEGQPIDRYCDARQLGVDERLELF 189          
The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig100136.1.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3M2K988_9BACT1.610e-5251.08Non-specific serine/threonine protein kinase (Frag... [more]
A0A7Y2C969_9BACT8.440e-5049.18Non-specific serine/threonine protein kinase (Frag... [more]
A0A523ITE8_9BACT9.880e-4948.09Non-specific serine/threonine protein kinase n=1 T... [more]
A0A3M2EGE8_9BACT5.950e-4849.48Non-specific serine/threonine protein kinase (Frag... [more]
A0A3A0DWH7_9BACT2.490e-4748.63Non-specific serine/threonine protein kinase n=1 T... [more]
A0A1V0DCL6_9BACT7.230e-4748.07Non-specific serine/threonine protein kinase n=2 T... [more]
UPI0003B639AE3.540e-4648.13tetratricopeptide repeat-containing serine/threoni... [more]
A0A6A0HWI6_9BACT6.960e-4648.09Non-specific serine/threonine protein kinase n=1 T... [more]
A0A7Y5G3R6_9BACT1.010e-4548.63Non-specific serine/threonine protein kinase (Frag... [more]
A0A838WD82_9BACT1.360e-4545.90Non-specific serine/threonine protein kinase n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
L-digitata_M_contig100136contigL-digitata_M_contig100136:3..551 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Laminaria digitata LdigPH10_18mv male OGS1.02022-07-08
Properties
Property NameValue
Stop0
Start1
Seed ortholog1089550.ATTH01000001_gene1831
PFAMsNERD,Pkinase,TPR_12,TPR_8
Model size549
Max annot lvl976|Bacteroidetes
KEGG koko:K12132
Hectar predicted targeting categoryother localisation
Exons1
Evalue9.91e-44
EggNOG OGsCOG0515@1|root,COG0515@2|Bacteria,4NPN9@976|Bacteroidetes,1FJI6@1100069|Bacteroidetes Order II. Incertae sedis
EC2.7.11.1
DescriptionProtein tyrosine kinase
Cds size519
COG categoryKLT
BRITEko00000,ko01000,ko01001
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406603.9103076-CDS-L-digitata_M_contig100136:2..5211682406603.9103076-CDS-L-digitata_M_contig100136:2..521Laminaria digitata LdigPH10_18mv maleCDSL-digitata_M_contig100136 3..521 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1682406603.9233463-UTR-L-digitata_M_contig100136:521..5511682406603.9233463-UTR-L-digitata_M_contig100136:521..551Laminaria digitata LdigPH10_18mv maleUTRL-digitata_M_contig100136 522..551 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_L-digitata_M_contig100136.1.1prot_L-digitata_M_contig100136.1.1Laminaria digitata LdigPH10_18mv malepolypeptideL-digitata_M_contig100136 3..521 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_L-digitata_M_contig100136.1.1

>prot_L-digitata_M_contig100136.1.1 ID=prot_L-digitata_M_contig100136.1.1|Name=mRNA_L-digitata_M_contig100136.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=173bp
MAALDYPADQHDTLLKEACQHDLELFNEVNALLKAHAKTDGLLDAFAAEQ
AADLLKDLDEMPQQIGPYAILGELGEGGMGRVFHAKRDDGQFEQFVAIKV
LRPGLATSSIIRRFLHERQILAKLQHPHIARLLDGGIDEHGHPFFAMDHV
DGLPITAYCNTHQFSIKQRIQLF
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mRNA from alignment at L-digitata_M_contig100136:3..551-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_L-digitata_M_contig100136.1.1 ID=mRNA_L-digitata_M_contig100136.1.1|Name=mRNA_L-digitata_M_contig100136.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=549bp|location=Sequence derived from alignment at L-digitata_M_contig100136:3..551- (Laminaria digitata LdigPH10_18mv male)
GAGCGCTGGCAAACAGTAGAGCGGCTATTCATGGCTGCGCTGGACTATCC TGCCGATCAACACGACACCCTGCTGAAAGAAGCTTGCCAACACGATCTGG AGTTATTCAATGAAGTAAATGCACTGTTAAAGGCGCATGCTAAAACAGAT GGTTTACTCGACGCATTTGCAGCAGAGCAGGCCGCTGACCTATTAAAAGA TTTGGATGAGATGCCCCAGCAGATTGGCCCATATGCCATCCTGGGTGAAC TCGGCGAAGGCGGGATGGGGCGTGTTTTCCACGCAAAGCGTGATGATGGA CAATTCGAACAATTTGTTGCGATAAAAGTCCTTCGCCCCGGCCTCGCAAC CAGCTCAATTATTCGACGCTTCCTCCACGAACGTCAGATTCTGGCCAAGC TTCAACATCCCCATATCGCCAGACTCCTGGACGGCGGTATTGACGAACAT GGACATCCCTTTTTCGCGATGGATCATGTGGATGGGCTGCCAATCACTGC ATATTGCAACACCCATCAATTCAGCATAAAGCAACGTATTCAACTCTTT
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Coding sequence (CDS) from alignment at L-digitata_M_contig100136:3..551-

>mRNA_L-digitata_M_contig100136.1.1 ID=mRNA_L-digitata_M_contig100136.1.1|Name=mRNA_L-digitata_M_contig100136.1.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=519bp|location=Sequence derived from alignment at L-digitata_M_contig100136:3..551- (Laminaria digitata LdigPH10_18mv male)
ATGGCTGCGCTGGACTATCCTGCCGATCAACACGACACCCTGCTGAAAGA
AGCTTGCCAACACGATCTGGAGTTATTCAATGAAGTAAATGCACTGTTAA
AGGCGCATGCTAAAACAGATGGTTTACTCGACGCATTTGCAGCAGAGCAG
GCCGCTGACCTATTAAAAGATTTGGATGAGATGCCCCAGCAGATTGGCCC
ATATGCCATCCTGGGTGAACTCGGCGAAGGCGGGATGGGGCGTGTTTTCC
ACGCAAAGCGTGATGATGGACAATTCGAACAATTTGTTGCGATAAAAGTC
CTTCGCCCCGGCCTCGCAACCAGCTCAATTATTCGACGCTTCCTCCACGA
ACGTCAGATTCTGGCCAAGCTTCAACATCCCCATATCGCCAGACTCCTGG
ACGGCGGTATTGACGAACATGGACATCCCTTTTTCGCGATGGATCATGTG
GATGGGCTGCCAATCACTGCATATTGCAACACCCATCAATTCAGCATAAA
GCAACGTATTCAACTCTTT
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