mRNA_L-digitata_M_contig10013.2.1 (mRNA) Laminaria digitata LdigPH10_18mv male
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Overview
Homology
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: D8LT14_ECTSI (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LT14_ECTSI) HSP 1 Score: 126 bits (317), Expect = 1.440e-31 Identity = 65/110 (59.09%), Postives = 77/110 (70.00%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLENQLSALCKSDSKKSVRTRPEKDGEEKPEPIIVVHELGSN 330
W+SP RLC+LIADAPCHG MYH S RD YP GCP GLDPSKL+Y L+YELGVD YFV IT T+KMIS L+N ++ + + R RP K G EP +VH+LG N
Sbjct: 924 WESPIRLCMLIADAPCHGSMYH-SCRDNYPTGCPKGLDPSKLLYKLQYELGVDFYFVRITGITDKMISVLQNTVTGY--TSDRNHARRRPLK-GTANTEPKFMVHDLGCN 1029
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: A0A6H5KL16_9PHAE (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KL16_9PHAE) HSP 1 Score: 118 bits (295), Expect = 1.340e-28 Identity = 57/109 (52.29%), Postives = 71/109 (65.14%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLENQLSALCKSDSKKSVRTRPEKDGEEKPEPIIVVHELGS 327
W+ RLCIL+ADAPCHG MYH + DRYPNGCP G DPSKL+Y L+YE+G D YF+ +T HT+KMI L+N+ A+ DS R + IVVH+LGS
Sbjct: 1007 WRGTIRLCILLADAPCHGSMYHIGIGDRYPNGCPKGNDPSKLLYELQYEIGADFYFIRMTRHTDKMIRVLQNRAGAMW--DSNGRPRPSSRQGASVAATRYIVVHDLGS 1113
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: D8LT13_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT13_ECTSI) HSP 1 Score: 110 bits (275), Expect = 6.640e-26 Identity = 54/114 (47.37%), Postives = 71/114 (62.28%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLENQLSALCKSD-----SKKSVRTRPEKDGEEKPEPIIVVHELGS 327
W+ RLCILIADAPCHG +YH + DRYPNGCP G DPSKL+Y L+YE+G D YF+ IT T++MI L+N+ + S++ +R +D IVVH+L S
Sbjct: 880 WRGTIRLCILIADAPCHGSIYHAGVGDRYPNGCPKGNDPSKLLYKLQYEIGADFYFIRITEVTDRMIRVLQNRAGNMFAESRTHPSSRQGLRVAKRRD--------IVVHDLSS 985
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: D7FWV2_ECTSI (VWFA domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV2_ECTSI) HSP 1 Score: 109 bits (272), Expect = 1.700e-25 Identity = 53/109 (48.62%), Postives = 67/109 (61.47%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLENQLSALCKSDSKKSVRTRPEKDGEEKPEPIIVVHELGS 327
W+ RLCIL+ADAPCHG +YH + DRYPNGCP G DPSKL+Y L+YE+G D YF+ +T HT+KMI L + S+ G + IVVH+LGS
Sbjct: 971 WRGNIRLCILLADAPCHGSIYHIGVGDRYPNGCPNGNDPSKLLYELQYEIGADFYFIRMTQHTDKMIQVLRKKAGDTFADAGAHSLAGN---GGRAATKRDIVVHDLGS 1076
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: A0A6H5KWB6_9PHAE (VWFA domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KWB6_9PHAE) HSP 1 Score: 100 bits (250), Expect = 1.580e-22 Identity = 51/110 (46.36%), Postives = 67/110 (60.91%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLENQLSALCKSDSKKSVRTRPEKDGEEKPEPIIVVHELGSN 330
W SP RLCIL ADAPCHG+MYH + D+YP GCP G+DPS ++Y L +ELGVD YF+ I T+KM+ ++ + + +KS P P VVH LGS+
Sbjct: 1032 WSSPVRLCILFADAPCHGKMYH-DVPDQYPKGCPEGVDPSNMIYQL-HELGVDFYFIRIAQVTDKMVDIFQSSVRQMAVKHGRKS---SPSPSFSNTNRPKFVVHNLGSD 1136
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: A0A6H5KZ40_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ40_9PHAE) HSP 1 Score: 66.6 bits (161), Expect = 1.570e-10 Identity = 26/47 (55.32%), Postives = 34/47 (72.34%), Query Frame = 1
Query: 1 WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLK 141
W+ RLCIL+ADAPCHG ++H D +PN CP G DP+KL+Y L+
Sbjct: 546 WRGNIRLCILLADAPCHGNVHHTGAGDMFPNCCPMGNDPAKLLYKLQ 592
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: F4QD32_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QD32_CAVFA) HSP 1 Score: 60.8 bits (146), Expect = 1.710e-8 Identity = 31/70 (44.29%), Postives = 45/70 (64.29%), Query Frame = 1
Query: 1 WKSP-TRLCILIADAPCHGQMYH--GSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMI 201
WK+ T++CI +ADAPCHG YH G+ D P+G G P + + T+K G+D YF+ I+ HT++MI
Sbjct: 687 WKNDHTKVCIHVADAPCHGTKYHDLGAASDTLPHGDTSG-HPEEQVKTMKNR-GIDYYFIKISPHTDRMI 754
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: F4QD06_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QD06_CAVFA) HSP 1 Score: 56.2 bits (134), Expect = 7.170e-7 Identity = 31/75 (41.33%), Postives = 42/75 (56.00%), Query Frame = 1
Query: 1 WKSP-TRLCILIADAPCHGQMYHGSMR--DRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMISTLEN 216
WK T++C+ +ADAPCHG YH R D YP+G P + + T+K G+D YFV I T+KMI +
Sbjct: 715 WKEGYTKVCVHVADAPCHGTKYHSLTREEDSYPDG--DSTHPEEQIRTMKGR-GIDYYFVRINHLTDKMIEVFRS 786
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: F4QD11_CAVFA (Uncharacterized protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QD11_CAVFA) HSP 1 Score: 55.8 bits (133), Expect = 1.010e-6 Identity = 29/70 (41.43%), Postives = 43/70 (61.43%), Query Frame = 1
Query: 1 WKSP-TRLCILIADAPCHGQMYH--GSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSITSHTNKMI 201
WK T++CI +ADAPCHG YH G++ D P+G + P + + T+K G+D YF+ I T++MI
Sbjct: 695 WKEGYTKVCIHVADAPCHGTKYHDFGAVSDSLPHG-DTNVPPEEQIKTMKNR-GIDYYFIKINHQTDRMI 762
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Match: A0A819HP21_9BILA (Hypothetical protein n=5 Tax=Adineta steineri TaxID=433720 RepID=A0A819HP21_9BILA) HSP 1 Score: 52.4 bits (124), Expect = 1.430e-5 Identity = 26/60 (43.33%), Postives = 39/60 (65.00%), Query Frame = 1
Query: 1 WK-SPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELGVDLYFVSI 177
W+ + T++C+LI+DAP HG G D++PNGCP GLDP K++ + E + LY V +
Sbjct: 123 WRENATKICVLISDAPPHGLDPSG---DQFPNGCPAGLDPIKIVREMA-EKHITLYTVGV 178 The following BLAST results are available for this feature:
BLAST of mRNA_L-digitata_M_contig10013.2.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 16
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_L-digitata_M_contig10013.2.1 >prot_L-digitata_M_contig10013.2.1 ID=prot_L-digitata_M_contig10013.2.1|Name=mRNA_L-digitata_M_contig10013.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=polypeptide|length=110bp WKSPTRLCILIADAPCHGQMYHGSMRDRYPNGCPGGLDPSKLMYTLKYELback to top mRNA from alignment at L-digitata_M_contig10013:6993..8272- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_L-digitata_M_contig10013.2.1 ID=mRNA_L-digitata_M_contig10013.2.1|Name=mRNA_L-digitata_M_contig10013.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=mRNA|length=1280bp|location=Sequence derived from alignment at L-digitata_M_contig10013:6993..8272- (Laminaria digitata LdigPH10_18mv male)back to top Coding sequence (CDS) from alignment at L-digitata_M_contig10013:6993..8272- >mRNA_L-digitata_M_contig10013.2.1 ID=mRNA_L-digitata_M_contig10013.2.1|Name=mRNA_L-digitata_M_contig10013.2.1|organism=Laminaria digitata LdigPH10_18mv male|type=CDS|length=330bp|location=Sequence derived from alignment at L-digitata_M_contig10013:6993..8272- (Laminaria digitata LdigPH10_18mv male)back to top |