prot_H-elongata_contig184145.4963.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig184145.4963.1
Unique Nameprot_H-elongata_contig184145.4963.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length83
Homology
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BLAST of mRNA_H-elongata_contig184145.4963.1 vs. uniprot
Match: D7G2C1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C1_ECTSI)

HSP 1 Score: 134 bits (338), Expect = 9.950e-37
Identity = 66/84 (78.57%), Postives = 78/84 (92.86%), Query Frame = 0 
Query:    1 QVGVKVSGFAPRVAALESVLYMIIDRIKDTPKPMDAESRKDAARVVRGFREQAHKLQTDLSRHFPFVVQVDPLSLAKG-GPQSS 83
            QVGVKVSGFAPR+AALESVLYM+ID++KD PKP+DAE+RK+AA V+R FR+QAHKLQTDLSRHFP+VVQVDPL LAK  GP+S+
Sbjct:  147 QVGVKVSGFAPRIAALESVLYMVIDQVKDLPKPVDAEARKEAAEVMRTFRQQAHKLQTDLSRHFPYVVQVDPLGLAKELGPKSN 230
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BLAST of mRNA_H-elongata_contig184145.4963.1 vs. uniprot
Match: A0A6H5L4U3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4U3_9PHAE)

HSP 1 Score: 133 bits (334), Expect = 4.950e-35
Identity = 67/84 (79.76%), Postives = 77/84 (91.67%), Query Frame = 0 
Query:    1 QVGVKVSGFAPRVAALESVLYMIIDRIKDTPKPMDAESRKDAARVVRGFREQAHKLQTDLSRHFPFVVQVDPLSLAKG-GPQSS 83
            QVGVKVSGFAPR+ ALESVLYMIID+IKD PKP+DAE+RK+AA V+R FR+QAHKLQTDLSRHFP+VVQVDPL LAK  GP+S+
Sbjct:  270 QVGVKVSGFAPRIDALESVLYMIIDQIKDLPKPVDAEARKEAAEVMRTFRQQAHKLQTDLSRHFPYVVQVDPLGLAKELGPKSN 353
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig184145.4963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7G2C1_ECTSI9.950e-3778.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5L4U3_9PHAE4.950e-3579.76Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig184145contigH-elongata_contig184145:439..1115 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig184145.4963.1mRNA_H-elongata_contig184145.4963.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig184145 439..1115 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig184145.4963.1 ID=prot_H-elongata_contig184145.4963.1|Name=mRNA_H-elongata_contig184145.4963.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=83bp
QVGVKVSGFAPRVAALESVLYMIIDRIKDTPKPMDAESRKDAARVVRGFR
EQAHKLQTDLSRHFPFVVQVDPLSLAKGGPQSS
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