mRNA_H-elongata_contig18331.4927.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI) HSP 1 Score: 883 bits (2281), Expect = 7.570e-316 Identity = 514/717 (71.69%), Postives = 564/717 (78.66%), Query Frame = 1
Query: 1 SNEGNTKRQRKDDHRT---DEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSSNGKKYKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTXXXXXXXXXXXXXXXHVVRGGYSPGFGGXXXXXXXXXAXXXXXXTGGYAMGXXXXXXXXXXGGRMYPRQGFSGGPRPVPAGGYGQYGVRGGGXXXXXXXYXGG------------IAGGQAVPMGGYAQMAGQSQXXXXXAGGGGYRAGNERDRRDDRRDF 2106
S G KRQRKDD +EVD ERG KRQKG N Y HAVHLRGLPWNASTK++ +F +P++V++ IH+VHN+RGEAYVKLK+E +E ALKKDRN IGRRYIEVFRSSIED ++DD SKG DG Y+GVVRMRGLPWSANEGDIR FFDG+ I+KDG+++TLNRDGRPSGEAYVVFE+E AK+ALKRDK+KIGERWID+FEATKGEVYSMTGGGGK G+Q GGVSFDTTDSAYTGVVRMRGLPFEATK+QIR FF I+VK+++IFIVTRPDGKASGEAFVLF+TEA+AE+AL KDKEKLGDRWIDLF TNKGALYQRVGVGVKMAAKPDAEFRGVLRMRG+PF +GVEEIR FFRGYK+Q+HGVFVVNGGDWRPTGE+YVLFD+EDEAERAFKALDKQKIG+RWIELFR+TKGDLYTATVRST+LGMERGGA+Y PMTCVKLRGLP+NVTEN+IF+FF+GLTVIGSFICKDVMARPTGEGFVEFA+VDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT GG GXXXXXXXXX XXXXXX XXXXXX XX GG RP P GGY YGVR GGXXXXXXX X + GG VPMGGYAQMAG Q GGY RDRRDDRRDF
Sbjct: 2 SENGGDKRQRKDDDGVRGGNEVD----------TERGSKRQKGGGNGAGKGE-----YTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQ-GGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT----------------AANGGNR----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXYXQYXXXXXXXVGGHRPSP-GGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGP-VPMGGYAQMAGGQQF-------GGY----HRDRRDDRRDF 669
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA) HSP 1 Score: 516 bits (1330), Expect = 5.750e-170 Identity = 279/573 (48.69%), Postives = 356/573 (62.13%), Query Frame = 1
Query: 163 YKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKL-QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRST---------------------------ILGMERGG-------------------------------ALYAPT--------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 1656
+ H V LRGLPWNA+ KDVT+FL +E+ ++ +++VHNTRGEAYVKL SE S EA +K DR +GRRYIEVF +S ED S++ K +G GV+RMRGLPW+A E DI +FF G ++ GV+I NR+GRPSGEAYVVF SE DA +A + RDK K+G RWIDLFE+TKGE+Y+ TG + G D Y GV++MRGLPF+ATK QI FF V+D+++FIV DG+ +G+AFV+F E DA+ AL DKEKLG RW+DLFP+ K A+Y+RVG V+MA++PDA +RGVLRMRG+P++AG +IR FF Y + + G+ V+ G D RP+GEAYV F ED+A+ A L K+KIG+R+IELF+ TKGDLYTAT R + + G GG AL P P TC KLRGLPY VTE IF FF GL VIG FICKD RPTGEGFVEF ++ C ++RNR M++RY+EVFA +K+DVLQ+I G
Sbjct: 152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA) HSP 1 Score: 438 bits (1127), Expect = 6.320e-142 Identity = 233/497 (46.88%), Postives = 319/497 (64.19%), Query Frame = 1
Query: 172 AVHLRGLPWNASTKDVTNFLSP--VEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGG---ALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1644
AV LRGLPWN+ V F S + + + IH++H GEA+V+ K+ ++AL +R IG RY+EVF + D A + + ++GQ+D D+RGVVR+RGLP+SA +I FFD + +DGV+I++NR GRP+GEAYVVFE+E D + A+K+DK ++G RW+D++ +TKG +Y++ + GV + + VVRMRGLPF+A K I FF + + I VT G+ SGEAFVLFATE +A RAL KDKEKL +RWIDLFP++K L RVGVG A KPDA R +++RG+PF+A V ++R F G + +HGV+++NG D RPTG+ YV+F +EDEA RA A + + R +E+ + K DLY T+ I R G Y+ TPM C +LRGLP+ V E IF FF G+ VIG F+CKD+ RPTGE FVEF D QLA+ RNRE + +RYVEVF +K DV+ +I
Sbjct: 24 AVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNV--VLADVDEGVDVVFAEEVH--VVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRI 513
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK) HSP 1 Score: 434 bits (1116), Expect = 8.970e-140 Identity = 234/512 (45.70%), Postives = 316/512 (61.72%), Query Frame = 1
Query: 166 KHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAG-SKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQ--KDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSG--------------GVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGD--WRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1644
K+AV LRGLPW+ S + +L V + + GEA ++ S +AA +DR +G+RY+EVF EDY R ++ G ++ +DGDY GV+R+RGLPWSA+ D+ FF G+ ++ + GV+ +NR+GRPSGEAYVVF S A A++ L+RDK ++ RW+DLF ATK EVY+ H Q+ G+ +D +Y GV+R+RG+PFE TK QIR FFG ++ D+FIV RPDG+ +G+AF +F +E DA A DK+K+G RW+DLFPT K LYQR G V AA+PD E VLR+RG+PF AG +IR FFR Y +HGV+VV D P GE YV F D AERA ALD+Q + R++ELF T+GDLY T S +L M+ A+Y MTCVK+ GLP V E+ IF FF G+ VIG FIC+D TGEGF EF ++ + Q SRN+ M DR V + +K+DV+++I
Sbjct: 120 KYAVWLRGLPWDTSKDAIKEWLG-AGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENA---HKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREI 627
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA) HSP 1 Score: 419 bits (1077), Expect = 1.140e-137 Identity = 198/359 (55.15%), Postives = 266/359 (74.09%), Query Frame = 1
Query: 571 RPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 1647
RPSG+A+VVF S A+ A+K+DK ++G RWIDLF+ TK E+Y + G + D+ Y GV+RMRGLPFEA+K IR FF + D +IF+V RPDGK SG+AFV+F +E DA+ AL DK+++G RW+DLF TNK LYQRVGV V+MA +PD+ ++GV++MRG+P++ GV +IR+F +K++ HGV+++NG D RPTGEA+ + TED+A A LDK+++G RW+E+F +K +LYTAT S I+GM+ A++ T MTCVKLRGLP+ V EN IFTFF+GL+VIG FIC+D+ R TGEGF EF+S+++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct: 1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQ--IQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA) HSP 1 Score: 408 bits (1049), Expect = 7.050e-129 Identity = 230/547 (42.05%), Postives = 323/547 (59.05%), Query Frame = 1
Query: 175 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY-------------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEV---------YSMTGGGGKHGEQSGGVSFDTTDSAYTG---VVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1644
+ L GLPW S DV NFL + V I ++ ++ GEA V++ S E ALK +G+R++++ ++ E + A + DA + + G+ +GVVRMRGLP+SA E DI FF G + GV++ + GR SG+AYVVFE+ +A+ ALK DK KIGERWIDLF ++K E+ Y GGGG+ E+ GG+ + G V+R+RGLPF+ T+ ++ FF + IF V R DG++SGEAFV+ ++ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y++ GVF+ G D RPTGEAYV+F+T ++A A +AL+KQ + RWI+L+ A+KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC) HSP 1 Score: 361 bits (926), Expect = 8.050e-113 Identity = 208/524 (39.69%), Postives = 290/524 (55.34%), Query Frame = 1
Query: 175 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY----------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATS 1620
+ L GLPW S DV NFL + V I ++ ++ GEA V++ S E ALK +G+R++++ ++ E + A + DA + GD +GVVRMRGLP+SA E DI FF G + + GV++ + GR SG+AYVVFE+ +A+ ALK DK KIGERWIDLF ++K E+ FF + IF V R DG++SGEAFV+ ++ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y++ HGVF+ G D RPTGEAYV+F+T ++A A +AL+KQ + RWI+L+ A+KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A +
Sbjct: 91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH------------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA) HSP 1 Score: 299 bits (765), Expect = 8.060e-91 Identity = 155/325 (47.69%), Postives = 211/325 (64.92%), Query Frame = 1
Query: 703 MTGGGG----KHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1644
M GGGG G GG+S V+R+RGLPF+ T+ ++ FF + IF V R DG++SGEAFV+ ++ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y++ HGVF+ G D RPTGEAYV+F+T ++A A +AL+KQ + RWI+L+ A+KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSRNR+ M DR +EV A SKE+VLQ I
Sbjct: 1 MGGGGGIRPGPKGVSIGGISH---------VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA) HSP 1 Score: 296 bits (758), Expect = 3.800e-86 Identity = 201/603 (33.33%), Postives = 301/603 (49.92%), Query Frame = 1
Query: 175 VHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYA--RSIDDAGSKGQSDGD------YRGVVRMRGLPWSANEGDIRTFFDG---VPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYT--GVVRMRGLPFEATKTQIRTFFG-----DISVKDT-DIFIVTRPDGKASGEAFVLFATEADAERALTK-DKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGIPFTAGVEEIRAFFRGYKL--QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYA---------------PT------------------------------------------------------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 1635
V LRGLP++ + + V +F +++ ED + ++ N GEA+V+ + +S A DR IG RYIEV S+ + R + +G +GD Y GVVRMRGLPW++ E D+R+FFDG + + GV+I + DGR G AY VF+SE +A A+ +D+ ++G R+I+LF+ATKGE+ S + + G S G+++++GL + AT QIR FF ++ K+ D+ V PDG++SGEAF +F + A + K + ++L RW++L TN+ + V A++P A + G LRMRGIP+T V++++ FF+GY+L HGV +V+ R GEAY F++E+EA RA +A+D+QK+G R++ELFR ++ ++ + + GG A PT P+TC KLRGLP++ T IF FF GL VIG+ + +D RPTGE F EF S + LA R+R M RYVEVF +KE+VL
Sbjct: 33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQ------RNDATRGPSRPRVPPQLENEGILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAKMRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC) HSP 1 Score: 259 bits (662), Expect = 2.230e-77 Identity = 123/252 (48.81%), Postives = 172/252 (68.25%), Query Frame = 1
Query: 826 IRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRN 1575
++ FF + IF V R DG++SGEAFV+ ++ +AL +DK+K+G RW+D+F ++ G L+ RVG V + AK D + GVL+MRG+PF V ++ +F Y++ HGVF+ G D RPTGEAYV+F+T ++A A +AL+KQ + RWI+L+ A+KGD+YT+TV S I+G GG +YA TPMTC +LRG+P VTE +F FF GL VIG +IC+D R TGE + EF S+DDCQ AMSR+
Sbjct: 3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18331.4927.1 >prot_H-elongata_contig18331.4927.1 ID=prot_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=702bp SNEGNTKRQRKDDHRTDEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSSback to top mRNA from alignment at H-elongata_contig18331:3153..5258- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18331.4927.1 ID=mRNA_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2106bp|location=Sequence derived from alignment at H-elongata_contig18331:3153..5258- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18331:3153..5258- >mRNA_H-elongata_contig18331.4927.1 ID=mRNA_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4212bp|location=Sequence derived from alignment at H-elongata_contig18331:3153..5258- (Himanthalia elongata Himel1 dioecious)back to top |