mRNA_H-elongata_contig18331.4927.1 (mRNA) Himanthalia elongata Himel1 dioecious

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-elongata_contig18331.4927.1
Unique NamemRNA_H-elongata_contig18331.4927.1
TypemRNA
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Homology
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: D7FW49_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW49_ECTSI)

HSP 1 Score: 883 bits (2281), Expect = 7.570e-316
Identity = 514/717 (71.69%), Postives = 564/717 (78.66%), Query Frame = 1
Query:    1 SNEGNTKRQRKDDHRT---DEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSSNGKKYKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGTXXXXXXXXXXXXXXXHVVRGGYSPGFGGXXXXXXXXXAXXXXXXTGGYAMGXXXXXXXXXXGGRMYPRQGFSGGPRPVPAGGYGQYGVRGGGXXXXXXXYXGG------------IAGGQAVPMGGYAQMAGQSQXXXXXAGGGGYRAGNERDRRDDRRDF 2106
            S  G  KRQRKDD      +EVD           ERG KRQKG  N           Y HAVHLRGLPWNASTK++ +F +P++V++  IH+VHN+RGEAYVKLK+E  +E ALKKDRN IGRRYIEVFRSSIED   ++DD  SKG  DG Y+GVVRMRGLPWSANEGDIR FFDG+ I+KDG+++TLNRDGRPSGEAYVVFE+E  AK+ALKRDK+KIGERWID+FEATKGEVYSMTGGGGK G+Q GGVSFDTTDSAYTGVVRMRGLPFEATK+QIR FF  I+VK+++IFIVTRPDGKASGEAFVLF+TEA+AE+AL KDKEKLGDRWIDLF TNKGALYQRVGVGVKMAAKPDAEFRGVLRMRG+PF +GVEEIR FFRGYK+Q+HGVFVVNGGDWRPTGE+YVLFD+EDEAERAFKALDKQKIG+RWIELFR+TKGDLYTATVRST+LGMERGGA+Y   PMTCVKLRGLP+NVTEN+IF+FF+GLTVIGSFICKDVMARPTGEGFVEFA+VDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT                   GG      GXXXXXXXXX XXXXXX       XXXXXX XX            GG RP P GGY  YGVR GGXXXXXXX X              + GG  VPMGGYAQMAG  Q        GGY     RDRRDDRRDF
Sbjct:    2 SENGGDKRQRKDDDGVRGGNEVD----------TERGSKRQKGGGNGAGKGE-----YTHAVHLRGLPWNASTKELVDFFAPMDVEDGDIHLVHNSRGEAYVKLKNESDLETALKKDRNTIGRRYIEVFRSSIEDVEHALDDVSSKGHGDGGYKGVVRMRGLPWSANEGDIRNFFDGIAIEKDGIHVTLNRDGRPSGEAYVVFETEEAAKEALKRDKDKIGERWIDIFEATKGEVYSMTGGGGKKGDQ-GGVSFDTTDSAYTGVVRMRGLPFEATKSQIRAFFDGINVKESNIFIVTRPDGKASGEAFVLFSTEAEAEKALLKDKEKLGDRWIDLFATNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGLPFASGVEEIRTFFRGYKVQEHGVFVVNGGDWRPTGESYVLFDSEDEAERAFKALDKQKIGDRWIELFRSTKGDLYTATVRSTVLGMERGGAMYGREPMTCVKLRGLPFNVTENNIFSFFEGLTVIGSFICKDVMARPTGEGFVEFATVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASGT----------------AANGGNR----GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYXXYXQYXXXXXXXVGGHRPSP-GGYASYGVRAGGXXXXXXXXXXXXXXXXXXXXXXXVVGGP-VPMGGYAQMAGGQQF-------GGY----HRDRRDDRRDF 669          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A835Z9Z3_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9Z3_9STRA)

HSP 1 Score: 516 bits (1330), Expect = 5.750e-170
Identity = 279/573 (48.69%), Postives = 356/573 (62.13%), Query Frame = 1
Query:  163 YKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVG-VGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKL-QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRST---------------------------ILGMERGG-------------------------------ALYAPT--------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGASG 1656
            + H V LRGLPWNA+ KDVT+FL  +E+ ++ +++VHNTRGEAYVKL SE S EA +K DR  +GRRYIEVF +S ED   S++    K   +G   GV+RMRGLPW+A E DI +FF G  ++  GV+I  NR+GRPSGEAYVVF SE DA +A + RDK K+G RWIDLFE+TKGE+Y+ TG   +      G      D  Y GV++MRGLPF+ATK QI  FF    V+D+++FIV   DG+ +G+AFV+F  E DA+ AL  DKEKLG RW+DLFP+ K A+Y+RVG   V+MA++PDA +RGVLRMRG+P++AG  +IR FF  Y + +  G+ V+ G D RP+GEAYV F  ED+A+ A   L K+KIG+R+IELF+ TKGDLYTAT R +                           + G   GG                               AL  P               P TC KLRGLPY VTE  IF FF GL VIG FICKD   RPTGEGFVEF ++  C   ++RNR  M++RY+EVFA +K+DVLQ+I   G
Sbjct:  152 FTHFVRLRGLPWNATVKDVTDFLRGIEISDEQVYIVHNTRGEAYVKLHSEASQEACIKCDRKTMGRRYIEVFPASAEDIEASLNVEQPKSSENGAVEGVLRMRGLPWTATEEDILSFFSGFDVRAGGVHIAKNREGRPSGEAYVVFHSELDAHEAKQQRDKEKMGGRWIDLFESTKGEMYANTGRSAEERWSEAGGERGAKDLDYRGVLKMRGLPFDATKAQIIDFFHGYGVEDSEVFIVMGRDGRPTGDAFVIFKDETDAKSALNLDKEKLGGRWVDLFPSTKAAVYERVGPTSVEMASRPDASYRGVLRMRGLPYSAGPAQIRDFFGDYAISKSDGIHVITGPDGRPSGEAYVEFANEDDAKHAL-GLHKEKIGDRYIELFQVTKGDLYTATTRPSYQPTHASATHVLARTMGYRGTGGGGGAVAGGYSGGYXXXXXXXXXXXXXXXXXXXXXXXXXXXXMHALPPPAFGGSAGGTYPANGPPPTCAKLRGLPYQVTEQDIFDFFNGLDVIGIFICKDASGRPTGEGFVEFGTIQHCAQGLNRNRHYMLERYIEVFACTKDDVLQEISGQG 723          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2SQA4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQA4_9STRA)

HSP 1 Score: 438 bits (1127), Expect = 6.320e-142
Identity = 233/497 (46.88%), Postives = 319/497 (64.19%), Query Frame = 1
Query:  172 AVHLRGLPWNASTKDVTNFLSP--VEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAA-KPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGG---ALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1644
            AV LRGLPWN+    V  F S   + +  + IH++H   GEA+V+ K+    ++AL  +R  IG RY+EVF +   D A +   + ++GQ+D D+RGVVR+RGLP+SA   +I  FFD   + +DGV+I++NR GRP+GEAYVVFE+E D + A+K+DK ++G RW+D++ +TKG +Y++        +   GV     +  +  VVRMRGLPF+A K  I  FF    + +  I  VT   G+ SGEAFVLFATE +A RAL KDKEKL +RWIDLFP++K  L  RVGVG   A  KPDA  R  +++RG+PF+A V ++R F  G  + +HGV+++NG D RPTG+ YV+F +EDEA RA  A +   +  R +E+ +  K DLY  T+   I    R G     Y+ TPM C +LRGLP+ V E  IF FF G+ VIG F+CKD+  RPTGE FVEF   D  QLA+ RNRE + +RYVEVF  +K DV+ +I
Sbjct:   24 AVKLRGLPWNSGKDTVVTFFSEGGLTIAPEAIHLLHTQTGEAFVRFKTAAEKDSALAMNRKNIGTRYVEVFFARASDAAAAARLSMARGQTDADFRGVVRLRGLPFSATAQEIIEFFDECKVAEDGVHISMNRGGRPTGEAYVVFETEDDVEKAVKKDKQRLGARWLDIYPSTKGAMYAVQNV--VLADVDEGVDVVFAEEVH--VVRMRGLPFQAIKQNIMDFFAGFPLMEHRIIFVTDLLGRPSGEAFVLFATEDEATRALEKDKEKLSERWIDLFPSSKIELLDRVGVGAAAAVNKPDAAVRNCVKLRGLPFSADVNQVRTFLNGLSIAEHGVYILNGNDSRPTGDGYVVFASEDEAARA-AAYNGASLNGRAVEVVQCCKSDLYVDTISCPI--RSRPGDRNIFYSRTPMNCARLRGLPFRVEEKDIFQFFDGVKVIGIFMCKDMHGRPTGEAFVEFEHADGLQLALGRNREVLGERYVEVFPQAKADVVTRI 513          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S3XQW7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XQW7_HETAK)

HSP 1 Score: 434 bits (1116), Expect = 8.970e-140
Identity = 234/512 (45.70%), Postives = 316/512 (61.72%), Query Frame = 1
Query:  166 KHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAG-SKGQSDGDYRGVVRMRGLPWSANEGDIRTFFDGVPIQ--KDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSG--------------GVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGD--WRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQI 1644
            K+AV LRGLPW+ S   +  +L    V    + +     GEA  ++ S    +AA  +DR  +G+RY+EVF    EDY R ++  G ++  +DGDY GV+R+RGLPWSA+  D+  FF G+ ++  + GV+  +NR+GRPSGEAYVVF S A A++ L+RDK ++  RW+DLF ATK EVY+       H  Q+               G+    +D +Y GV+R+RG+PFE TK QIR FFG  ++   D+FIV RPDG+ +G+AF +F +E DA  A   DK+K+G RW+DLFPT K  LYQR G  V  AA+PD E   VLR+RG+PF AG  +IR FFR Y   +HGV+VV   D    P GE YV F   D AERA  ALD+Q +  R++ELF  T+GDLY  T  S +L M+   A+Y    MTCVK+ GLP  V E+ IF FF G+ VIG FIC+D     TGEGF EF ++ + Q   SRN+  M DR V +   +K+DV+++I
Sbjct:  120 KYAVWLRGLPWDTSKDAIKEWLG-AGVKVTRVTLRPGNSGEALAEVASRGDQDAARARDRAHMGKRYVEVFPLESEDYKRQLEKFGYTESVTDGDYEGVLRVRGLPWSASAADVLEFFGGLEVEGGEKGVHFIINREGRPSGEAYVVFASAAAAREGLQRDKQRLKGRWLDLFGATKAEVYACENA---HKAQAAAFAHAAGAAMPGVPGMEAMPSDGSYRGVLRLRGIPFEVTKDQIREFFGQWALNSRDVFIVKRPDGRVAGDAFAVFRSEEDARAAQALDKQKIGGRWVDLFPTTKAELYQRCGAAVHAAARPDCEAADVLRVRGLPFQAGPADIRDFFRDYPPVEHGVYVVPALDPLRPPPGEGYVQFADRDAAERARMALDRQSLFGRYLELFLVTRGDLYAGTTFSPVLSMQGPNAIYDIKGMTCVKMIGLPPTVDEDMIFKFFAGVKVIGIFICRDPSGNITGEGFAEFENLTEAQRGSSRNKAQMEDRAVTLLPCAKDDVVREI 627          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7S2XYI2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYI2_9STRA)

HSP 1 Score: 419 bits (1077), Expect = 1.140e-137
Identity = 198/359 (55.15%), Postives = 266/359 (74.09%), Query Frame = 1
Query:  571 RPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIG 1647
            RPSG+A+VVF S   A+ A+K+DK ++G RWIDLF+ TK E+Y +       G     +     D+ Y GV+RMRGLPFEA+K  IR FF    + D +IF+V RPDGK SG+AFV+F +E DA+ AL  DK+++G RW+DLF TNK  LYQRVGV V+MA +PD+ ++GV++MRG+P++ GV +IR+F   +K++ HGV+++NG D RPTGEA+ +  TED+A  A   LDK+++G RW+E+F  +K +LYTAT  S I+GM+   A++  T MTCVKLRGLP+ V EN IFTFF+GL+VIG FIC+D+  R TGEGF EF+S+++CQ AMSRNRE M+DRYVEVFA SK+DVL QIG
Sbjct:    1 RPSGDAFVVFCSVEHARKAMKKDKERMGNRWIDLFDTTKAELYGVQSTARGFGPAQ--IQQTEIDADYAGVIRMRGLPFEASKEDIRHFFSGYRIVDQNIFVVNRPDGKPSGDAFVIFGSEGDAKGALELDKKQMGSRWVDLFLTNKAELYQRVGVAVRMADRPDSNYKGVVKMRGLPYSVGVNDIRSFLSNFKVEPHGVYIINGPDGRPTGEAFTVMQTEDDAAAAKAKLDKERLGNRWVEMFVVSKAELYTATAHSPIVGMQGQNAVFGSTGMTCVKLRGLPFKVDENMIFTFFEGLSVIGIFICRDLGGRATGEGFCEFSSMEECQQAMSRNREVMVDRYVEVFACSKDDVLAQIG 357          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A4D9D6B4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D6B4_9STRA)

HSP 1 Score: 408 bits (1049), Expect = 7.050e-129
Identity = 230/547 (42.05%), Postives = 323/547 (59.05%), Query Frame = 1
Query:  175 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY-------------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEV---------YSMTGGGGKHGEQSGGVSFDTTDSAYTG---VVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1644
            + L GLPW  S  DV NFL  + V         I ++ ++ GEA V++ S    E ALK     +G+R++++  ++ E +              A  + DA +   + G+                    +GVVRMRGLP+SA E DI  FF G  +   GV++  +  GR SG+AYVVFE+  +A+ ALK DK KIGERWIDLF ++K E+         Y   GGGG+  E+ GG+       +  G   V+R+RGLPF+ T+  ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++   GVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:   91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATTATGEAGDGTTGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVADGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAVPSMRGYGPPGGGGEGWEEGGGIRPGPKGVSIGGISHVIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPQGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFVGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 637          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4P9_NANGC (Rna binding protein (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4P9_NANGC)

HSP 1 Score: 361 bits (926), Expect = 8.050e-113
Identity = 208/524 (39.69%), Postives = 290/524 (55.34%), Query Frame = 1
Query:  175 VHLRGLPWNASTKDVTNFLSPVEVDEDV-----IHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDY--------------ARSIDDAGSKGQSDGDY----------------RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATS 1620
            + L GLPW  S  DV NFL  + V         I ++ ++ GEA V++ S    E ALK     +G+R++++  ++ E +              A  + DA +     GD                 +GVVRMRGLP+SA E DI  FF G  + + GV++  +  GR SG+AYVVFE+  +A+ ALK DK KIGERWIDLF ++K E+                                              FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A +
Sbjct:   91 LRLSGLPWKCSVADVQNFLKHIGVSTRPDPAADIKILDDSSGEALVRVGSAEEEETALKLKVGRLGKRFVDIGSTTEEAFEATPATSEEAMNAPATVVPDAATATGEAGDGTAGEASSLTVPESSTPQGVVRMRGLPYSATEKDILAFFSGFGVAEGGVHMHYDHMGRASGQAYVVFETVPEAQHALKLDKEKIGERWIDLFLSSKPEMLHAH------------------------------------------FFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAAA 572          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: W7TED5_9STRA (RNA binding protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TED5_9STRA)

HSP 1 Score: 299 bits (765), Expect = 8.060e-91
Identity = 155/325 (47.69%), Postives = 211/325 (64.92%), Query Frame = 1
Query:  703 MTGGGG----KHGEQSGGVSFDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMM-----DRYVEVFATSKEDVLQQI 1644
            M GGGG      G   GG+S          V+R+RGLPF+ T+  ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSRNR+ M      DR +EV A SKE+VLQ I
Sbjct:    1 MGGGGGIRPGPKGVSIGGISH---------VIRVRGLPFDCTRMDLQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRNRDYMPGGGVGDRPIEVTAASKEEVLQLI 316          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: A0A7R9U5K5_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U5K5_9STRA)

HSP 1 Score: 296 bits (758), Expect = 3.800e-86
Identity = 201/603 (33.33%), Postives = 301/603 (49.92%), Query Frame = 1
Query:  175 VHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVKLKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYA--RSIDDAGSKGQSDGD------YRGVVRMRGLPWSANEGDIRTFFDG---VPIQKDGVYITLNRDGRPSGEAYVVFESEADAKDALK-RDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVSFDTTDSAYT--GVVRMRGLPFEATKTQIRTFFG-----DISVKDT-DIFIVTRPDGKASGEAFVLFATEADAERALTK-DKEKLGDRWIDLFPTNKGALYQRVGVGVKMAAKP----DAEFRGV--------------LRMRGIPFTAGVEEIRAFFRGYKL--QDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGALYA---------------PT------------------------------------------------------------PMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVL 1635
            V LRGLP++ + + V +F   +++ ED + ++ N  GEA+V+ +  +S   A   DR  IG RYIEV  S+  +    R +     +G  +GD      Y GVVRMRGLPW++ E D+R+FFDG   +   + GV+I  + DGR  G AY VF+SE +A  A+  +D+ ++G R+I+LF+ATKGE+ S         + + G S           G+++++GL + AT  QIR FF      ++  K+  D+  V  PDG++SGEAF +F +   A +   K + ++L  RW++L  TN+  +   V      A++P     A + G               LRMRGIP+T  V++++ FF+GY+L    HGV +V+    R  GEAY  F++E+EA RA +A+D+QK+G R++ELFR ++ ++        +  +  GG   A               PT                                                            P+TC KLRGLP++ T   IF FF GL VIG+ + +D   RPTGE F EF S  +  LA  R+R  M  RYVEVF  +KE+VL
Sbjct:   33 VRLRGLPYSTNPQGVRDFFDGLKIAEDGVWLLGNGAGEAFVRFEPGVSEADAKAFDRKYIGERYIEVMISTSSERLSRRELFKGDGRGNEEGDADDMPNYLGVVRMRGLPWTSTEADVRSFFDGCSGLRAGEKGVFICRHPDGRSKGMAYAVFDSEQEAAAAVSSKDRQQMGGRYIELFQATKGELNSQ------RNDATRGPSRPRVPPQLENEGILKIKGLRWAATPAQIREFFNGHESAELEGKECLDVVPVVHPDGRSSGEAFAIFDSPTTAAKMRDKLNGKELDGRWLNLILTNRQEMVHTVEYFGTSASQPFGGVHAGYGGAYNVFPGRSGGEMSALRMRGIPWTTSVQDVQVFFQGYRLLPMPHGVLLVSNASGRSAGEAYAAFESEEEASRAQQAMDRQKMGTRYVELFRCSRAEMNQIAEAGGVKPLGAGGVAMAQRGPAGPRLAGSVPYPTGAPGGYAYGVPYSHGTGGMPLAGNAAAGMGAGMGGAFSGHAAYENAPGFDGRAAPGPGRSPVTCCKLRGLPFSATHQDIFNFFSGLQVIGTLLVRDSAGRPTGEAFCEFNSPYEVTLAGMRHRAHMGSRYVEVFPCTKEEVL 629          
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Match: K8Z4G4_NANGC (Rna binding protein n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8Z4G4_NANGC)

HSP 1 Score: 259 bits (662), Expect = 2.230e-77
Identity = 123/252 (48.81%), Postives = 172/252 (68.25%), Query Frame = 1
Query:  826 IRTFFGDISVKDTDIFIVTRPDGKASGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVG-VKMAAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRPTGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTILGMERGGA-LYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDVMARPTGEGFVEFASVDDCQLAMSRN 1575
            ++ FF  +      IF V R DG++SGEAFV+  ++    +AL +DK+K+G RW+D+F ++ G L+ RVG   V + AK D  + GVL+MRG+PF   V ++  +F  Y++  HGVF+  G D RPTGEAYV+F+T ++A  A +AL+KQ +  RWI+L+ A+KGD+YT+TV S I+G   GG  +YA TPMTC +LRG+P  VTE  +F FF GL VIG +IC+D   R TGE + EF S+DDCQ AMSR+
Sbjct:    3 LQHFFASVGPTANGIFFVHRMDGRSSGEAFVVLHSQEAVRQALMQDKQKMGSRWLDIFESHPGELFSRVGAAAVTLGAKDDVGYAGVLKMRGLPFQTTVPDVATWFGSYRVAPHGVFITMGADGRPTGEAYVIFETPEDAVAAREALNKQTMNNRWIDLYLASKGDVYTSTVHSPIVGQAHGGCPVYANTPMTCARLRGVPSTVTEEELFRFFAGLQVIGLYICRDSSGRATGEAYAEFGSLDDCQQAMSRS 254          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18331.4927.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW49_ECTSI7.570e-31671.69Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835Z9Z3_9STRA5.750e-17048.69Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2SQA4_9STRA6.320e-14246.88Hypothetical protein (Fragment) n=1 Tax=Rhizochrom... [more]
A0A7S3XQW7_HETAK8.970e-14045.70Hypothetical protein (Fragment) n=1 Tax=Heterosigm... [more]
A0A7S2XYI2_9STRA1.140e-13755.15Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A4D9D6B4_9STRA7.050e-12942.05Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
K8Z4P9_NANGC8.050e-11339.69Rna binding protein (Fragment) n=1 Tax=Nannochloro... [more]
W7TED5_9STRA8.060e-9147.69RNA binding protein n=1 Tax=Nannochloropsis gadita... [more]
A0A7R9U5K5_9STRA3.800e-8633.33Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
K8Z4G4_NANGC2.230e-7748.81Rna binding protein n=1 Tax=Nannochloropsis gadita... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18331contigH-elongata_contig18331:3153..5258 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score891.0
Seed ortholog evalue3.7e-256
Seed eggNOG ortholog2880.D7FW49
Preferred nameHNRNPH3
KEGG koko:K12898,ko:K14947
GOsGO:0000003,GO:0000375,GO:0000377,GO:0000398,GO:0000578,GO:0002009,GO:0003002,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005681,GO:0005737,GO:0005739,GO:0005759,GO:0005829,GO:0005886,GO:0006139,GO:0006378,GO:0006396,GO:0006397,GO:0006403,GO:0006417,GO:0006725,GO:0006807,GO:0006950,GO:0006996,GO:0007028,GO:0007154,GO:0007165,GO:0007166,GO:0007167,GO:0007169,GO:0007275,GO:0007276,GO:0007281,GO:0007292,GO:0007308,GO:0007309,GO:0007310,GO:0007311,GO:0007314,GO:0007315,GO:0007316,GO:0007350,GO:0007351,GO:0007389,GO:0008134,GO:0008150,GO:0008152,GO:0008187,GO:0008266,GO:0008298,GO:0008358,GO:0008380,GO:0008543,GO:0008595,GO:0009295,GO:0009611,GO:0009653,GO:0009719,GO:0009790,GO:0009798,GO:0009880,GO:0009888,GO:0009889,GO:0009948,GO:0009950,GO:0009952,GO:0009953,GO:0009987,GO:0009994,GO:0010033,GO:0010243,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0016020,GO:0016043,GO:0016070,GO:0016071,GO:0016331,GO:0017025,GO:0019094,GO:0019219,GO:0019221,GO:0019222,GO:0019899,GO:0019953,GO:0021700,GO:0022412,GO:0022414,GO:0022607,GO:0023052,GO:0030154,GO:0030855,GO:0031123,GO:0031124,GO:0031323,GO:0031326,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032991,GO:0033036,GO:0034097,GO:0034248,GO:0034641,GO:0035282,GO:0035722,GO:0035770,GO:0042060,GO:0042221,GO:0042645,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043631,GO:0044085,GO:0044237,GO:0044238,GO:0044344,GO:0044422,GO:0044424,GO:0044428,GO:0044429,GO:0044444,GO:0044446,GO:0044464,GO:0044703,GO:0045451,GO:0046483,GO:0048468,GO:0048469,GO:0048477,GO:0048598,GO:0048599,GO:0048609,GO:0048729,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051179,GO:0051246,GO:0051252,GO:0051276,GO:0051641,GO:0051704,GO:0051716,GO:0060255,GO:0060429,GO:0060810,GO:0060811,GO:0065007,GO:0070013,GO:0070671,GO:0070727,GO:0070848,GO:0070887,GO:0071013,GO:0071310,GO:0071345,GO:0071349,GO:0071363,GO:0071417,GO:0071495,GO:0071704,GO:0071774,GO:0071840,GO:0071944,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1902494,GO:1990904,GO:2000112
EggNOG free text desc.regulation of RNA splicing
EggNOG OGsKOG1365@1,KOG1365@2759,KOG4211@1,KOG4211@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03041
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionRNA recognition motif domain
Ec32 orthologEc-01_003380.1
Exons1
Model size2106
Cds size2106
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930052.9721918-CDS-H-elongata_contig18331:3152..52581622930052.9721918-CDS-H-elongata_contig18331:3152..5258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18331 3153..5258 -
1691679262.408791-CDS-H-elongata_contig18331:3152..52581691679262.408791-CDS-H-elongata_contig18331:3152..5258Himanthalia elongata Himel1 dioeciousCDSH-elongata_contig18331 3153..5258 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18331.4927.1prot_H-elongata_contig18331.4927.1Himanthalia elongata Himel1 dioeciouspolypeptideH-elongata_contig18331 3153..5258 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-elongata_contig18331.4927.1

>prot_H-elongata_contig18331.4927.1 ID=prot_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=702bp
SNEGNTKRQRKDDHRTDEVDGDSSRRSSPGRERGLKRQKGDANNGSSDSS
NGKKYKHAVHLRGLPWNASTKDVTNFLSPVEVDEDVIHMVHNTRGEAYVK
LKSELSMEAALKKDRNMIGRRYIEVFRSSIEDYARSIDDAGSKGQSDGDY
RGVVRMRGLPWSANEGDIRTFFDGVPIQKDGVYITLNRDGRPSGEAYVVF
ESEADAKDALKRDKNKIGERWIDLFEATKGEVYSMTGGGGKHGEQSGGVS
FDTTDSAYTGVVRMRGLPFEATKTQIRTFFGDISVKDTDIFIVTRPDGKA
SGEAFVLFATEADAERALTKDKEKLGDRWIDLFPTNKGALYQRVGVGVKM
AAKPDAEFRGVLRMRGIPFTAGVEEIRAFFRGYKLQDHGVFVVNGGDWRP
TGEAYVLFDTEDEAERAFKALDKQKIGERWIELFRATKGDLYTATVRSTI
LGMERGGALYAPTPMTCVKLRGLPYNVTENHIFTFFQGLTVIGSFICKDV
MARPTGEGFVEFASVDDCQLAMSRNRESMMDRYVEVFATSKEDVLQQIGA
SGTGGAGGPGGGAGGYGGHVVRGGYSPGFGGGGGGGGGGGAGAGGGGTGG
YAMGPGFGGSSSLGGGRMYPRQGFSGGPRPVPAGGYGQYGVRGGGGGNYG
AGYGGGIAGGQAVPMGGYAQMAGQSQIGSQYAGGGGYRAGNERDRRDDRR
DF
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mRNA from alignment at H-elongata_contig18331:3153..5258-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-elongata_contig18331.4927.1 ID=mRNA_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=2106bp|location=Sequence derived from alignment at H-elongata_contig18331:3153..5258- (Himanthalia elongata Himel1 dioecious)
AGCAACGAGGGAAACACAAAGCGGCAGCGCAAGGATGATCATCGCACGGA TGAGGTGGATGGTGACAGCAGCAGACGAAGTTCTCCAGGGCGTGAGCGGG GGTTGAAGCGACAGAAGGGAGACGCAAACAACGGCTCGTCTGACAGTAGT AATGGGAAAAAGTACAAACACGCCGTGCATTTGCGTGGTTTGCCATGGAA TGCCAGCACGAAAGATGTGACGAACTTCCTATCCCCTGTAGAGGTGGACG AGGACGTCATCCACATGGTGCACAACACTCGCGGAGAGGCTTATGTCAAG CTTAAAAGTGAATTGAGCATGGAGGCGGCGTTGAAGAAGGATCGGAACAT GATCGGCCGACGCTACATCGAGGTTTTTCGGAGTTCAATTGAGGATTACG CTCGTTCGATCGATGACGCCGGCAGCAAGGGTCAGAGCGATGGCGACTAC AGGGGAGTCGTGCGCATGCGGGGTCTGCCGTGGAGTGCGAACGAGGGGGA CATTCGCACGTTCTTTGACGGAGTTCCGATCCAGAAAGACGGAGTATACA TAACGCTCAACCGCGACGGGCGTCCATCTGGGGAGGCGTACGTGGTGTTC GAGTCCGAGGCGGATGCTAAGGATGCCCTGAAGCGGGACAAGAACAAAAT CGGGGAACGATGGATCGATCTTTTTGAGGCAACGAAAGGAGAAGTGTACT CAATGACTGGTGGAGGTGGCAAGCATGGAGAACAGAGCGGTGGTGTGTCA TTTGACACGACCGATAGCGCCTACACAGGGGTGGTGCGAATGCGCGGACT GCCATTCGAGGCTACCAAGACGCAGATACGAACCTTCTTTGGCGATATCA GTGTCAAGGATACCGACATCTTCATTGTCACCCGGCCGGACGGAAAAGCT TCCGGAGAAGCGTTCGTGTTGTTCGCTACCGAAGCAGACGCAGAGCGCGC ACTCACGAAGGACAAGGAAAAGCTGGGAGACAGATGGATCGACCTCTTCC CAACCAACAAGGGTGCCCTGTACCAGCGCGTGGGTGTTGGTGTAAAGATG GCCGCGAAGCCGGACGCAGAATTTCGTGGGGTCCTTCGAATGCGCGGCAT CCCCTTCACTGCCGGCGTTGAGGAAATACGTGCCTTTTTCCGCGGTTACA AGCTCCAGGACCATGGCGTATTCGTGGTGAATGGAGGTGACTGGCGCCCC ACCGGAGAGGCGTACGTTTTGTTCGACACTGAAGACGAGGCCGAGCGCGC TTTCAAAGCTTTGGACAAGCAAAAGATCGGCGAGCGGTGGATTGAGCTCT TCAGGGCGACCAAGGGTGACCTTTACACCGCTACGGTACGCAGCACCATC CTCGGTATGGAGCGCGGTGGCGCGCTATACGCGCCGACGCCCATGACTTG CGTCAAGCTAAGGGGGCTACCTTACAACGTGACCGAGAACCACATATTTA CCTTTTTCCAAGGACTCACCGTGATCGGTAGCTTCATCTGCAAAGACGTG ATGGCCCGTCCTACAGGCGAGGGGTTTGTCGAGTTCGCCTCGGTGGATGA CTGTCAGCTTGCCATGTCTCGCAACCGTGAAAGCATGATGGACCGCTACG TGGAAGTTTTCGCCACAAGTAAGGAAGACGTGCTACAGCAGATCGGCGCA TCCGGCACAGGCGGCGCCGGCGGGCCTGGCGGTGGAGCAGGCGGGTATGG TGGACATGTCGTTCGAGGCGGTTACAGCCCCGGCTTCGGCGGTGGCGGTG GTGGTGGCGGCGGAGGAGGTGCAGGTGCAGGTGGAGGAGGTACAGGTGGG TACGCAATGGGACCTGGTTTCGGTGGCAGCAGTAGCTTAGGGGGGGGGAG AATGTATCCTCGCCAAGGTTTTTCTGGCGGCCCCCGTCCGGTGCCGGCTG GTGGGTATGGACAGTACGGTGTTCGAGGCGGTGGTGGAGGCAATTATGGT GCAGGATACGGTGGGGGTATTGCTGGAGGACAGGCAGTACCAATGGGAGG TTATGCCCAAATGGCTGGTCAGAGTCAAATCGGTTCCCAGTACGCAGGCG GGGGTGGCTACAGGGCTGGAAACGAGAGAGATCGTAGGGATGACAGGAGG GATTTC
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Coding sequence (CDS) from alignment at H-elongata_contig18331:3153..5258-

>mRNA_H-elongata_contig18331.4927.1 ID=mRNA_H-elongata_contig18331.4927.1|Name=mRNA_H-elongata_contig18331.4927.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=4212bp|location=Sequence derived from alignment at H-elongata_contig18331:3153..5258- (Himanthalia elongata Himel1 dioecious)
AGCAACGAGGGAAACACAAAGCGGCAGCGCAAGGATGATCATCGCACGGA
TGAGGTGGATGGTGACAGCAGCAGACGAAGTTCTCCAGGGCGTGAGCGGG
GGTTGAAGCGACAGAAGGGAGACGCAAACAACGGCTCGTCTGACAGTAGT
AATGGGAAAAAGTACAAACACGCCGTGCATTTGCGTGGTTTGCCATGGAA
TGCCAGCACGAAAGATGTGACGAACTTCCTATCCCCTGTAGAGGTGGACG
AGGACGTCATCCACATGGTGCACAACACTCGCGGAGAGGCTTATGTCAAG
CTTAAAAGTGAATTGAGCATGGAGGCGGCGTTGAAGAAGGATCGGAACAT
GATCGGCCGACGCTACATCGAGGTTTTTCGGAGTTCAATTGAGGATTACG
CTCGTTCGATCGATGACGCCGGCAGCAAGGGTCAGAGCGATGGCGACTAC
AGGGGAGTCGTGCGCATGCGGGGTCTGCCGTGGAGTGCGAACGAGGGGGA
CATTCGCACGTTCTTTGACGGAGTTCCGATCCAGAAAGACGGAGTATACA
TAACGCTCAACCGCGACGGGCGTCCATCTGGGGAGGCGTACGTGGTGTTC
GAGTCCGAGGCGGATGCTAAGGATGCCCTGAAGCGGGACAAGAACAAAAT
CGGGGAACGATGGATCGATCTTTTTGAGGCAACGAAAGGAGAAGTGTACT
CAATGACTGGTGGAGGTGGCAAGCATGGAGAACAGAGCGGTGGTGTGTCA
TTTGACACGACCGATAGCGCCTACACAGGGGTGGTGCGAATGCGCGGACT
GCCATTCGAGGCTACCAAGACGCAGATACGAACCTTCTTTGGCGATATCA
GTGTCAAGGATACCGACATCTTCATTGTCACCCGGCCGGACGGAAAAGCT
TCCGGAGAAGCGTTCGTGTTGTTCGCTACCGAAGCAGACGCAGAGCGCGC
ACTCACGAAGGACAAGGAAAAGCTGGGAGACAGATGGATCGACCTCTTCC
CAACCAACAAGGGTGCCCTGTACCAGCGCGTGGGTGTTGGTGTAAAGATG
GCCGCGAAGCCGGACGCAGAATTTCGTGGGGTCCTTCGAATGCGCGGCAT
CCCCTTCACTGCCGGCGTTGAGGAAATACGTGCCTTTTTCCGCGGTTACA
AGCTCCAGGACCATGGCGTATTCGTGGTGAATGGAGGTGACTGGCGCCCC
ACCGGAGAGGCGTACGTTTTGTTCGACACTGAAGACGAGGCCGAGCGCGC
TTTCAAAGCTTTGGACAAGCAAAAGATCGGCGAGCGGTGGATTGAGCTCT
TCAGGGCGACCAAGGGTGACCTTTACACCGCTACGGTACGCAGCACCATC
CTCGGTATGGAGCGCGGTGGCGCGCTATACGCGCCGACGCCCATGACTTG
CGTCAAGCTAAGGGGGCTACCTTACAACGTGACCGAGAACCACATATTTA
CCTTTTTCCAAGGACTCACCGTGATCGGTAGCTTCATCTGCAAAGACGTG
ATGGCCCGTCCTACAGGCGAGGGGTTTGTCGAGTTCGCCTCGGTGGATGA
CTGTCAGCTTGCCATGTCTCGCAACCGTGAAAGCATGATGGACCGCTACG
TGGAAGTTTTCGCCACAAGTAAGGAAGACGTGCTACAGCAGATCGGCGCA
TCCGGCACAGGCGGCGCCGGCGGGCCTGGCGGTGGAGCAGGCGGGTATGG
TGGACATGTCGTTCGAGGCGGTTACAGCCCCGGCTTCGGCGGTGGCGGTG
GTGGTGGCGGCGGAGGAGGTGCAGGTGCAGGTGGAGGAGGTACAGGTGGG
TACGCAATGGGACCTGGTTTCGGTGGCAGCAGTAGCTTAGGGGGGGGGAG
AATGTATCCTCGCCAAGGTTTTTCTGGCGGCCCCCGTCCGGTGCCGGCTG
GTGGGTATGGACAGTACGGTGTTCGAGGCGGTGGTGGAGGCAATTATGGT
GCAGGATACGGTGGGGGTATTGCTGGAGGACAGGCAGTACCAATGGGAGG
TTATGCCCAAATGGCTGGTCAGAGTCAAATCGGTTCCCAGTACGCAGGCG
GGGGTGGCTACAGGGCTGGAAACGAGAGAGATCGTAGGGATGACAGGAGG
GATTTCAGCAACGAGGGAAACACAAAGCGGCAGCGCAAGGATGATCATCG
CACGGATGAGGTGGATGGTGACAGCAGCAGACGAAGTTCTCCAGGGCGTG
AGCGGGGGTTGAAGCGACAGAAGGGAGACGCAAACAACGGCTCGTCTGAC
AGTAGTAATGGGAAAAAGTACAAACACGCCGTGCATTTGCGTGGTTTGCC
ATGGAATGCCAGCACGAAAGATGTGACGAACTTCCTATCCCCTGTAGAGG
TGGACGAGGACGTCATCCACATGGTGCACAACACTCGCGGAGAGGCTTAT
GTCAAGCTTAAAAGTGAATTGAGCATGGAGGCGGCGTTGAAGAAGGATCG
GAACATGATCGGCCGACGCTACATCGAGGTTTTTCGGAGTTCAATTGAGG
ATTACGCTCGTTCGATCGATGACGCCGGCAGCAAGGGTCAGAGCGATGGC
GACTACAGGGGAGTCGTGCGCATGCGGGGTCTGCCGTGGAGTGCGAACGA
GGGGGACATTCGCACGTTCTTTGACGGAGTTCCGATCCAGAAAGACGGAG
TATACATAACGCTCAACCGCGACGGGCGTCCATCTGGGGAGGCGTACGTG
GTGTTCGAGTCCGAGGCGGATGCTAAGGATGCCCTGAAGCGGGACAAGAA
CAAAATCGGGGAACGATGGATCGATCTTTTTGAGGCAACGAAAGGAGAAG
TGTACTCAATGACTGGTGGAGGTGGCAAGCATGGAGAACAGAGCGGTGGT
GTGTCATTTGACACGACCGATAGCGCCTACACAGGGGTGGTGCGAATGCG
CGGACTGCCATTCGAGGCTACCAAGACGCAGATACGAACCTTCTTTGGCG
ATATCAGTGTCAAGGATACCGACATCTTCATTGTCACCCGGCCGGACGGA
AAAGCTTCCGGAGAAGCGTTCGTGTTGTTCGCTACCGAAGCAGACGCAGA
GCGCGCACTCACGAAGGACAAGGAAAAGCTGGGAGACAGATGGATCGACC
TCTTCCCAACCAACAAGGGTGCCCTGTACCAGCGCGTGGGTGTTGGTGTA
AAGATGGCCGCGAAGCCGGACGCAGAATTTCGTGGGGTCCTTCGAATGCG
CGGCATCCCCTTCACTGCCGGCGTTGAGGAAATACGTGCCTTTTTCCGCG
GTTACAAGCTCCAGGACCATGGCGTATTCGTGGTGAATGGAGGTGACTGG
CGCCCCACCGGAGAGGCGTACGTTTTGTTCGACACTGAAGACGAGGCCGA
GCGCGCTTTCAAAGCTTTGGACAAGCAAAAGATCGGCGAGCGGTGGATTG
AGCTCTTCAGGGCGACCAAGGGTGACCTTTACACCGCTACGGTACGCAGC
ACCATCCTCGGTATGGAGCGCGGTGGCGCGCTATACGCGCCGACGCCCAT
GACTTGCGTCAAGCTAAGGGGGCTACCTTACAACGTGACCGAGAACCACA
TATTTACCTTTTTCCAAGGACTCACCGTGATCGGTAGCTTCATCTGCAAA
GACGTGATGGCCCGTCCTACAGGCGAGGGGTTTGTCGAGTTCGCCTCGGT
GGATGACTGTCAGCTTGCCATGTCTCGCAACCGTGAAAGCATGATGGACC
GCTACGTGGAAGTTTTCGCCACAAGTAAGGAAGACGTGCTACAGCAGATC
GGCGCATCCGGCACAGGCGGCGCCGGCGGGCCTGGCGGTGGAGCAGGCGG
GTATGGTGGACATGTCGTTCGAGGCGGTTACAGCCCCGGCTTCGGCGGTG
GCGGTGGTGGTGGCGGCGGAGGAGGTGCAGGTGCAGGTGGAGGAGGTACA
GGTGGGTACGCAATGGGACCTGGTTTCGGTGGCAGCAGTAGCTTAGGGGG
GGGGAGAATGTATCCTCGCCAAGGTTTTTCTGGCGGCCCCCGTCCGGTGC
CGGCTGGTGGGTATGGACAGTACGGTGTTCGAGGCGGTGGTGGAGGCAAT
TATGGTGCAGGATACGGTGGGGGTATTGCTGGAGGACAGGCAGTACCAAT
GGGAGGTTATGCCCAAATGGCTGGTCAGAGTCAAATCGGTTCCCAGTACG
CAGGCGGGGGTGGCTACAGGGCTGGAAACGAGAGAGATCGTAGGGATGAC
AGGAGGGATTTC
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