mRNA_H-elongata_contig18331.4926.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A6H5JV97_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV97_9PHAE) HSP 1 Score: 218 bits (554), Expect = 3.430e-63 Identity = 105/142 (73.94%), Postives = 119/142 (83.80%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
Q LLPSLP D N IE QA+ L++ E GPY+VV +QEC+RMNVLL EL+RSLLEL KG+ G LN TQ MEDLQ ALAKNEVPGRD + TCSWE++AW SRK LSSWLADL+ERVGLLRRWTAKL+TLPNPLWLPGLFN +A
Sbjct: 702 QRLLPSLPTSFDVNTIEAQARSLLDTEQGPYVVVAVQECSRMNVLLFELKRSLLELVKGMDGQLNMTQAMEDLQTALAKNEVPGRDLYSTCSWERHAWPSRKTLSSWLADLVERVGLLRRWTAKLSTLPNPLWLPGLFNPTA 843
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: D7FW50_ECTSI (Dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW50_ECTSI) HSP 1 Score: 218 bits (555), Expect = 4.710e-63 Identity = 105/142 (73.94%), Postives = 120/142 (84.51%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
Q LLPSLP D NAIE QA+ L++ + GPY+VV +QEC+RMNVLL EL+RSLLEL KG+ G LN TQ MEDLQ ALAKNEVPGRD + TCSWE++AW SRK LSSWLADL+ERVGLLRRWTAKL+TLPNPLWLPGLFN +A
Sbjct: 3880 QRLLPSLPTSFDVNAIEAQARSLLDTDQGPYVVVAVQECSRMNVLLFELKRSLLELVKGMDGQLNMTQAMEDLQTALAKNEVPGRDLYSTCSWERHAWPSRKTLSSWLADLVERVGLLRRWTAKLSTLPNPLWLPGLFNPTA 4021
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A7S1G6P9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G6P9_9STRA) HSP 1 Score: 152 bits (385), Expect = 1.280e-40 Identity = 78/142 (54.93%), Postives = 97/142 (68.31%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
+ LL LP I+E+A L+ E PY+VV LQECTRMN LL E+RRSL+EL KGL G LN ++ MEDL +AL+ N+VPGR+P SWEK AW S+KNL +W +DLL RV L RW+ L LP +WLPGLFN +A
Sbjct: 341 EDLLSRLPTDFGMIDIQERAAPLLEKETAPYVVVALQECTRMNTLLQEIRRSLMELRKGLDGQLNMSEPMEDLAQALSINQVPGRNPFHKTSWEKLAWWSKKNLQTWFSDLLLRVRQLERWSETLI-LPTSMWLPGLFNPTA 481
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A7S2US96_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US96_9STRA) HSP 1 Score: 145 bits (366), Expect = 3.970e-40 Identity = 73/140 (52.14%), Postives = 95/140 (67.86%), Query Frame = 1
Query: 7 LLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
LL LP + + +AK L+ G+ GP++VV +QECTRMN+LL E+RRSL+EL KGL G LN +Q MEDL AL NE PGR+P C+WEK AW SRK+L + A++L R+ L W+ + PN LWLPGLFN +A
Sbjct: 11 LLERLPENFEAVTLGLRAKPLLEGKSGPFVVVAMQECTRMNMLLSEIRRSLIELDKGLKGQLNMSQSMEDLAAALTINEWPGRNPFAQCAWEKLAWPSRKSLLTQFANMLLRIDQLVDWSEEFVA-PNSLWLPGLFNPTA 149
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A662XF46_9STRA (Uncharacterized protein n=1 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XF46_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.790e-38 Identity = 72/142 (50.70%), Postives = 101/142 (71.13%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
++LL LP+ +D ++ +A+ L+ + PY+VV LQE TRM+ LLHE++ SL+EL+KG+ G LN T+ MEDL ALA N+VPGR+ CSWE++AW SRK+LS W AD+LERV L WT++ LP +W+ GLFN +A
Sbjct: 2459 ETLLEQLPSEIDLADLKAKAEPLLTTDQSPYVVVALQEATRMHALLHEIQSSLVELTKGIQGTLNMTESMEDLMEALAINQVPGRNILHLCSWERHAWWSRKSLSLWFADVLERVQFLSTWTSEFR-LPYSMWISGLFNPTA 2599
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A6G0X3R1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X3R1_9STRA) HSP 1 Score: 147 bits (370), Expect = 3.820e-38 Identity = 74/144 (51.39%), Postives = 100/144 (69.44%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHG--PYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
Q L LP+ + ++EQA+ L+ H PY+VV LQECTRMNVLL +R+SL EL KG+ G LN + ME+L ++A ++VPGR+P +CSWE++AW SRK+L++W+ADLLERV L WT LP+ +WL GLFN SA
Sbjct: 3796 QGLTSQLPSDFPLHDLQEQAQPLLEQGHSTAPYIVVALQECTRMNVLLEVMRKSLNELIKGMNGQLNMSDAMEELLESMAMHQVPGRNPLHSCSWERFAWPSRKSLTAWIADLLERVAFLTAWTQDWN-LPSSMWLSGLFNPSA 3938
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A0W8DCM5_PHYNI (Homoserine O-acetyltransferase n=1 Tax=Phytophthora nicotianae TaxID=4790 RepID=A0A0W8DCM5_PHYNI) HSP 1 Score: 145 bits (367), Expect = 6.640e-38 Identity = 71/142 (50.00%), Postives = 98/142 (69.01%), Query Frame = 1
Query: 1 QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
+ LL LP +D ++ +A+ L+ + PY+VVVLQE RM+ LLHE++ SL+EL+KG+ G LN T+ MEDL AL N+VPGR+ CSWE+YAW SRK+LS W ADLL+R+ L WT++ LP +W+ GLFN +A
Sbjct: 426 EELLEKLPPEIDLADLQAKAEPLLTTDQSPYVVVVLQEAARMHTLLHEIQTSLIELTKGIQGTLNMTEPMEDLMAALLINQVPGRNVLHMCSWERYAWWSRKSLSLWFADLLDRIQFLSNWTSEFR-LPYSMWISGLFNPTA 566
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A5D6XK04_9STRA (IPT/TIG domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XK04_9STRA) HSP 1 Score: 146 bits (368), Expect = 7.090e-38 Identity = 72/135 (53.33%), Postives = 91/135 (67.41%), Query Frame = 1
Query: 22 PAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
PA + E A L+ EHGP++VV +QEC+RMNVLL E+R SL +L KGL G LN +Q MEDL A++ NEVPGR+P C WEK AW S+K+LS W AD+++R LR W A T P +WLPGLFN +A
Sbjct: 3361 PAHFSLLDLTEAAAPLLTEEHGPFVVVAMQECSRMNVLLEEIRASLGDLKKGLNGQLNMSQAMEDLATAMSLNEVPGRNPFSQCKWEKQAWPSKKSLSGWFADMVKRHEQLRAWAADFVT-PFSIWLPGLFNPTA 3494
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: A0A6H5KXD4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD4_9PHAE) HSP 1 Score: 146 bits (368), Expect = 7.100e-38 Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 7 LLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
LL LP + ++ +AK L+ GE GP++VV LQEC+RMN LL E+RRSL+EL KGL G LN +Q MEDL A NE PGR+P C+WEK AW S+KNL S D+L R+ L W+ L T P +WLPGLFN +A
Sbjct: 3571 LLERLPDNFEMITMQLRAKPLLEGESGPFVVVALQECSRMNALLTEIRRSLVELDKGLKGQLNMSQSMEDLATAFGLNEWPGRNPFAQCAWEKLAWPSKKNLLSEFIDMLRRIAQLVAWSEDLVT-PQCVWLPGLFNPTA 3709
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Match: D7FRX0_ECTSI (Dynein heavy chain family dynein heavy chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRX0_ECTSI) HSP 1 Score: 146 bits (368), Expect = 7.100e-38 Identity = 74/140 (52.86%), Postives = 93/140 (66.43%), Query Frame = 1
Query: 7 LLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRRSLLELSKGLCGHLNKTQEMEDLQRALAKNEVPGRDPHCTCSWEKYAWLSRKNLSSWLADLLERVGLLRRWTAKLTTLPNPLWLPGLFNASA 426
LL LP + ++ +AK L+ GE GP++VV LQEC+RMN LL E+RRSL+EL KGL G LN +Q MEDL A NE PGR+P C+WEK AW S+KNL S D+L R+ L W+ L T P +WLPGLFN +A
Sbjct: 3618 LLERLPDNFEMITMQLRAKPLLEGESGPFVVVALQECSRMNALLTEIRRSLVELDKGLKGQLNMSQSMEDLATAFGLNEWPGRNPFAQCAWEKLAWPSKKNLLSEFIDMLRRIAQLVAWSEDLVT-PQCVWLPGLFNPTA 3756 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18331.4926.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig18331.4926.1 >prot_H-elongata_contig18331.4926.1 ID=prot_H-elongata_contig18331.4926.1|Name=mRNA_H-elongata_contig18331.4926.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=142bp QSLLPSLPAGLDTNAIEEQAKGLMNGEHGPYMVVVLQECTRMNVLLHELRback to top mRNA from alignment at H-elongata_contig18331:870..2002+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig18331.4926.1 ID=mRNA_H-elongata_contig18331.4926.1|Name=mRNA_H-elongata_contig18331.4926.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1133bp|location=Sequence derived from alignment at H-elongata_contig18331:870..2002+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig18331:870..2002+ >mRNA_H-elongata_contig18331.4926.1 ID=mRNA_H-elongata_contig18331.4926.1|Name=mRNA_H-elongata_contig18331.4926.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=852bp|location=Sequence derived from alignment at H-elongata_contig18331:870..2002+ (Himanthalia elongata Himel1 dioecious)back to top |