prot_H-elongata_contig18307.4916.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig18307.4916.1
Unique Nameprot_H-elongata_contig18307.4916.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length357
Homology
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5JFG2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFG2_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 7.030e-54
Identity = 123/407 (30.22%), Postives = 198/407 (48.65%), Query Frame = 0
Query:   37 TPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRL-----------------------------------------------------------------------------------LCAVASFCKNPGPAH---KKEVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            TP +++   A   + +LCHFD EQAF++++++ ++Y+ +P+      G + +L K++  L QA + W+      + A+GF Q  AD CVFR + DG V +++VVHVDDI A   ++   D+F A+L +   +K  G L                                                                                   + AVA +C +P   H     +++ Y  RT  + I++  G   G  ++ Y D+DF +    +RSVSG ++    GA+SW+S  Q+     T+EAEYVAL + VK+ILF RQ+ +FM P +G+  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  + +++ V++V S  Q AD LTK   K
Sbjct:   43 TPAKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK 448          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5L4L4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4L4_9PHAE)

HSP 1 Score: 200 bits (509), Expect = 1.290e-53
Identity = 118/344 (34.30%), Postives = 194/344 (56.40%), Query Frame = 0
Query:   10 KCRLAAQGFWQVNGVYYTEKYQPTPATTPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDK-VTIDRFAAELGQKFKLKQWGRLLCAVASFCKNPGPAHKKEVMNYFLRTKDWEITYGGQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTK 352
            K RL A+G  Q   V   E Y PT A + +R++   A  ++  L  FD +QAF+++D+D ++++ +PE   +  G + +LNK++  L QA + WN+     +  +G  Q  AD CVFR + +G V V +VVHVDDI +  + + + +  F  +  ++F    + +L+ ++        P     V+ ++               GL ME + D+D+ + +  +RSVSG ++M   G ISW S  Q+     T+EAEYV+L+  +K++L  RQV +FM P  G+  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  D +++ + +V S  QHAD LTK
Sbjct:  917 KSRLVARGDMQRVHVDCGETYAPTVAVSSVRLLAARACEQNLSLRRFDIKQAFVQSDLDEDVFMRLPEGCGRLSGMIVKLNKSLYGLKQASRQWNSHLARCLICLGIIQCLADTCVFRLIKEGRVVVTLVVHVDDIFSIGERRGLKLSEFDQD--EEFVSWPFRKLIGSLMWLATQTRPDIANAVLVFW---------------GLSMEVFADADYASKVADRRSVSGGLVMCGGGCISWCSRTQKCVTLSTTEAEYVSLAVVMKEVLVLRQVWRFMLPEAGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFIRELVDRKEISIFHVESAYQHADFLTK 1243          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5KJP2_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJP2_9PHAE)

HSP 1 Score: 189 bits (480), Expect = 5.200e-53
Identity = 111/353 (31.44%), Postives = 194/353 (54.96%), Query Frame = 0
Query:   26 YTEKYQPTPATTPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDR-------------FAAELGQKFKLKQWGR-----LLCAVASFCKNPGPAHKKE---VMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            + E + PT + + +R++   A  ++ +LCHFD +QAF++++++ ++++ +P+   +  G + +L K++  L QA + W+      +  +GF Q  AD CVFR + DG V +++VVHV  ++  A   V++               F   +G    L    R      + AVA +C +P   H K    ++ Y  RT    IT+  G   G+ M+ ++D+D  +    +RSVSG V+M   G ++W+S  Q+     T+E EYVA+++ +K++LF RQV + M     +  + VFEDN+GAI++A     +  +KHIDV+HH +R+  + +++ + +V S  QHAD LTK   K
Sbjct:    8 FGELFAPTVSVSSVRLLAALACEQNLDLCHFDIQQAFVQSELEDDVFMRLPQGCGRLSGLIVKLYKSLYGLKQASRQWHAHLTKCLLLLGFVQCLADACVFRLMEDGCVIMIIVVHVGFLMWLATXPVSVKLTDFDENEACADVPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKMVHWKAALGILGYVRRTSWMGITFERGVVTGMSMQVFVDADNASKAADRRSVSGGVVMCGGGGVTWFSRTQKCVTLSTTEVEYVAIADVLKEVLFLRQVWRLMLLDADMSCIPVFEDNQGAIQIAHNPITNSNSKHIDVRHHFIRELVERKEISITHVTSEFQHADFLTKAISK 360          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5K4U5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4U5_9PHAE)

HSP 1 Score: 198 bits (504), Expect = 6.340e-53
Identity = 132/409 (32.27%), Postives = 208/409 (50.86%), Query Frame = 0
Query:    4 GKVEKYKCRLAAQGFWQVNGVYYTEKYQPTPATTPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLK-----QW------------GRLLCAVASFCKN-------PGP----------------------------AHKKEVM---NYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            G   K K RL A+G  Q   + + E Y PT + + +R++  +A   + +LCHFD EQAF++++++ ++ + +P+      G +  L K++  L Q+ + W+      + A+GF Q  AD CVFR +  G V +++VVHVDDI A   ++   D+F A+L +   +K     +W            GRL  +  +F          PG                              H  E M    Y  RT    +++  G   G  ++ Y D+DF +    +RSVSG ++    G +SW+S  Q+     T+EAEYVAL + VK+ILF RQV +FM P + +  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  + ++V V++V S  Q AD LTK   K
Sbjct: 1151 GWATKVKARLVARGDMQREYIDFGELYAPTVSVSCVRMLAASACELNLDLCHFDVEQAFVRSELEEDVNMRLPQGCGALSGMIVILGKSLYGLRQSPRQWHAMLKRCLVALGFEQCMADACVFRLIEGGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCLYERSKETGRLTISQQTFADELAAEYGVPGGKSVPMSSGVKLSDFDADEEATDFPFRELVHWDEAMAILGYAKRTSYMGVSFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGVVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQVWRFMLPKVSMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEVSVIHVPSPYQRADFLTKSLPK 1558          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5JWG1_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWG1_9PHAE)

HSP 1 Score: 189 bits (479), Expect = 2.550e-51
Identity = 139/440 (31.59%), Postives = 205/440 (46.59%), Query Frame = 0
Query:    4 GKVEKYKCRLAAQGFWQVNGVYYTEKYQPTPATTPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQ----------------------------------------KF--------------KLKQW---------------GRLLC--------------AVASFCKNPGPAHKK---EVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            G   + K RL A+GF Q  GV + E + P P+ T IR++   A   D +LCHFDAEQAF+++++D  ++I +P       G V RL +++  L QA + W++     M ++GF    AD CV R +  G V +VVV+HVDDI +    K   D+F  +L +                                        KF              KL+Q+               G L+               AVA +   P   H +    V+ Y   T  + IT+  G   G  ME ++DSDF      +RSVSGA++M     + +    Q+     ++EAEYVA+S+ +K+ +F R + KF+ P   VG   V+EDN GAI LA+    +  +KHID++HH +R+     + KVV+VRS  Q AD LTKP  K
Sbjct:  124 GYAVRAKARLVARGFAQREGVDFFETFSPYPSITSIRLLAAIACVLDWDLCHFDAEQAFVQSELDEVVFIRLPPGCGALSGKVVRLRRSLYGLKQASRTWHHHLMRGMKSLGFEPCAADACVMRLIESGVVTMVVVIHVDDIFSIGL-KSRCDQFGVDLNRYVPISNLGELRWYAGCRFSRDTVLGTVTISQQAVAEKIVAKFGVTTDKETPMVVGLKLEQYDADEPDVDEPFRSLVGHLMWLANQTRPDILNAVRAVARYSHAPKRLHWEAALHVLMYVRFTSGYGITFQRGTVGGDHMELFVDSDFANKATDRRSVSGALVMFAGACVMYLCRTQKSVTLSSTEAEYVAMSDGMKEAIFLRYLWKFIFPGRDVGCTPVWEDNVGAIHLASNPATTPNSKHIDIRHHFIRERVARGEFKVVHVRSDLQRADFLTKPLPK 562          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5J4N2_9PHAE (Integrase catalytic domain-containing protein n=18 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J4N2_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 4.740e-51
Identity = 123/407 (30.22%), Postives = 198/407 (48.65%), Query Frame = 0
Query:   37 TPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRL-----------------------------------------------------------------------------------LCAVASFCKNPGPAH---KKEVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            TP +++   A   + +LCHFD EQAF++++++ ++Y+ +P+      G + +L K++  L QA + W+      + A+GF Q  AD CVFR + DG V +++VVHVDDI A   ++   D+F A+L +   +K  G L                                                                                   + AVA +C +P   H     +++ Y  RT  + I++  G   G  ++ Y D+DF +    +RSVSG ++    GA+SW+S  Q+     T+EAEYVAL + VK+ILF RQ+ +FM P +G+  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  + +++ V++V S  Q AD LTK   K
Sbjct: 1379 TPAKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK 1784          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5L867_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L867_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 4.750e-51
Identity = 123/407 (30.22%), Postives = 198/407 (48.65%), Query Frame = 0
Query:   37 TPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRL-----------------------------------------------------------------------------------LCAVASFCKNPGPAH---KKEVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            TP +++   A   + +LCHFD EQAF++++++ ++Y+ +P+      G + +L K++  L QA + W+      + A+GF Q  AD CVFR + DG V +++VVHVDDI A   ++   D+F A+L +   +K  G L                                                                                   + AVA +C +P   H     +++ Y  RT  + I++  G   G  ++ Y D+DF +    +RSVSG ++    GA+SW+S  Q+     T+EAEYVAL + VK+ILF RQ+ +FM P +G+  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  + +++ V++V S  Q AD LTK   K
Sbjct: 1165 TPAKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK 1570          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5KBD4_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBD4_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.040e-51
Identity = 123/407 (30.22%), Postives = 198/407 (48.65%), Query Frame = 0
Query:   37 TPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRL-----------------------------------------------------------------------------------LCAVASFCKNPGPAH---KKEVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            TP +++   A   + +LCHFD EQAF++++++ ++Y+ +P+      G + +L K++  L QA + W+      + A+GF Q  AD CVFR + DG V +++VVHVDDI A   ++   D+F A+L +   +K  G L                                                                                   + AVA +C +P   H     +++ Y  RT  + I++  G   G  ++ Y D+DF +    +RSVSG ++    GA+SW+S  Q+     T+EAEYVAL + VK+ILF RQ+ +FM P +G+  + VFEDN+GAI+LA    ++  +KHIDV+HH +R+  + +++ V++V S  Q AD LTK   K
Sbjct: 1233 TPAKMLAALACELNLDLCHFDVEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATEFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPVFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLPK 1638          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5JG40_9PHAE (Integrase catalytic domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG40_9PHAE)

HSP 1 Score: 192 bits (489), Expect = 5.960e-51
Identity = 122/407 (29.98%), Postives = 198/407 (48.65%), Query Frame = 0
Query:   37 TPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRL-----------------------------------------------------------------------------------LCAVASFCKNPGPAH---KKEVMNYFLRTKDWEITYG-GQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTKPFDK 356
            TP +++   A   + +LCHFD EQAF++++++ ++Y+ +P+      G + +L K++  L QA + W+      + A+GF Q  AD CVFR + DG V +++VVHVDDI A   ++   D+F A+L +   +K  G L                                                                                   + AVA +C +P   H     +++ Y  RT  + I++  G   G  ++ Y D+DF +    +RSVSG ++    GA+SW+S  Q+     T+EAEYVAL + VK+ILF RQ+ +FM P +G+  + +FEDN+GAI+LA    ++  +KHIDV+HH +R+  + +++ V++V S  Q AD LTK   K
Sbjct:  873 TPAKMLAALACELNLDLCHFDIEQAFVRSELEEDVYMRLPQGCGALSGMIVKLGKSLYGLRQASRQWHAMLKRCLVALGFEQCMADACVFRLIEDGCVVLILVVHVDDIFA-VGERERCDKFGADLNKSVPVKNLGELRWYSGCFYERNKETGRLTISQQTFTDELAAEYGVVGGRSVPMSSGVKLSDFDADEVATDFPFRELVGSLMWLATQTRPDIANAVRAVARYCASPKLVHWNAAMDILGYARRTSHFGISFQRGTVEGFSLQGYADADFASKAADRRSVSGGIVTCGGGAVSWFSRTQKCVTLSTTEAEYVALGDVVKEILFLRQIWRFMLPQVGMPCIPIFEDNQGAIQLAQNPISNSNSKHIDVRHHFLRELVERKEISVIHVPSPYQRADFLTKSLSK 1278          
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Match: A0A6H5JP36_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JP36_9PHAE)

HSP 1 Score: 191 bits (486), Expect = 7.020e-51
Identity = 120/349 (34.38%), Postives = 181/349 (51.86%), Query Frame = 0
Query:    4 GKVEKYKCRLAAQGFWQVNGVYYTEKYQPTPATTPIRIVLVTAAAKDGELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAGKCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAKDKVTIDRFAAELGQKFKLKQWGRLLCAVASFCKNPGPAHKKEVMNYFLRTKDWEITYGGQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYSAIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDNEGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLLTK 352
            GK+ K K RL A+GF Q +GV Y E + PT     IR+V+  A   + EL H D EQAF+++ +D E+++++P       G + RLNK+   L QA + +  +   D+  IGF Q  +DPCV R ++  EV  ++ +HVDDIL +A  K   +     LG     +  G +   +         A   E+                   G     + DS F A     RS      +     +SW+S  Q+  +  TSEAEY+A+ + VK+ LF   + +F+ PS     ++VFEDNEGAI LA    +S R+KHIDV+HH +R+ ++   ++V +V S +QHAD+LTK
Sbjct:  205 GKIVKAKARLVAKGFKQKHGVDYLETFSPTANAASIRLVVALACKYNLELLHLDIEQAFVQSKLDHEVFMKLPPGCDSMSGKIVRLNKSWYGLKQASRTFYKRLVSDLLRIGFEQSLSDPCVLRFMMGDEVMGIIAIHVDDIL-YAGTKRLAEVIVEALGDSLPTRNLGEVRLFLGCAFSRDREAGTIEISQE----------------GYIRSVFRDSIFVA---PARSPLPLPTIAAGCLVSWFSWTQKCVSLSTSEAEYIAMGDGVKEALFVNGMLQFLRPSAKPRKIDVFEDNEGAIALAENPLSSSRSKHIDVRHHFLRNLTEEGVIEVTHVPSKEQHADILTK 533          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig18307.4916.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFG2_9PHAE7.030e-5430.22Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5L4L4_9PHAE1.290e-5334.30Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KJP2_9PHAE5.200e-5331.44Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4U5_9PHAE6.340e-5332.27Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JWG1_9PHAE2.550e-5131.59Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5J4N2_9PHAE4.740e-5130.22Integrase catalytic domain-containing protein n=18... [more]
A0A6H5L867_9PHAE4.750e-5130.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KBD4_9PHAE5.040e-5130.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JG40_9PHAE5.960e-5129.98Integrase catalytic domain-containing protein n=3 ... [more]
A0A6H5JP36_9PHAE7.020e-5134.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 3..173
e-value: 1.6E-29
score: 103.2
NoneNo IPR availablePANTHERPTHR45895FAMILY NOT NAMEDcoord: 2..352

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig18307contigH-elongata_contig18307:4912..6023 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig18307.4916.1mRNA_H-elongata_contig18307.4916.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig18307 4912..6023 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig18307.4916.1 ID=prot_H-elongata_contig18307.4916.1|Name=mRNA_H-elongata_contig18307.4916.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=357bp
RQDGKVEKYKCRLAAQGFWQVNGVYYTEKYQPTPATTPIRIVLVTAAAKD
GELCHFDAEQAFLKADIDGELYIEIPEEYQKFPGAVGRLNKAICELVQAG
KCWNNKFCGDMAAIGFGQGKADPCVFRKVVDGEVEVVVVVHVDDILAHAK
DKVTIDRFAAELGQKFKLKQWGRLLCAVASFCKNPGPAHKKEVMNYFLRT
KDWEITYGGQGCGLCMEAYMDSDFGACLDTKRSVSGAVLMLTKGAISWYS
AIQEVTASGTSEAEYVALSEAVKDILFSRQVKKFMEPSMGVGAVNVFEDN
EGAIKLATIKHASRRTKHIDVKHHMVRDTSDAQKVKVVYVRSIDQHADLL
TKPFDK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2