mRNA_H-elongata_contig106040.489.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: D8LHF5_ECTSI (Lipase_3 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF5_ECTSI) HSP 1 Score: 188 bits (478), Expect = 2.900e-53 Identity = 97/115 (84.35%), Postives = 103/115 (89.57%), Query Frame = 1
Query: 1 QVPLCEVAKQFFPDRNNIHGPDFEIKVKQGDH-HSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGLHQQ 342
+VPL EVAKQFFP HGPDF+IKVKQGD HS AQFFEAYSAKLNVSVV+IRGTD+GRISDLIEDIKIWVEP+VL+ LSMVFPTIRIWPDSTSS VIEWLHETLQLFGL QQ
Sbjct: 704 KVPLSEVAKQFFPPGK--HGPDFKIKVKQGDDLHSHAQFFEAYSAKLNVSVVAIRGTDVGRISDLIEDIKIWVEPIVLKGLSMVFPTIRIWPDSTSSVVIEWLHETLQLFGLQQQ 816
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A7S3XTY2_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XTY2_HETAK) HSP 1 Score: 110 bits (275), Expect = 8.110e-27 Identity = 53/99 (53.54%), Postives = 74/99 (74.75%), Query Frame = 1
Query: 46 NNIHG-PDFEIKVKQGD--HHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
+ HG P FE+++ + H A F E YSA LN+SVVS++GTD+GRISD +EDIK++ EP+V +LS VFPT+R+W D+T+S +++WLHET LFGL
Sbjct: 63 HTAHGAPLFELRLPPQEFLRHGDANFLEFYSASLNLSVVSVKGTDIGRISDFVEDIKLYTEPVVFMILSSVFPTVRMWSDNTASYMVDWLHETQVLFGL 161
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A835YVP4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YVP4_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.200e-26 Identity = 53/69 (76.81%), Postives = 62/69 (89.86%), Query Frame = 1
Query: 127 SAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
S K NVS+V++RGTD+GR+ D IEDIKIWVEP+V +LS +FPTIRIWPDST+SAVIEWLHETLQLFGL
Sbjct: 702 SRKGNVSIVAVRGTDIGRLGDFIEDIKIWVEPVVFMLLSTLFPTIRIWPDSTASAVIEWLHETLQLFGL 770
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A1V9ZID9_9STRA (Transmembrane protein (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZID9_9STRA) HSP 1 Score: 112 bits (281), Expect = 1.230e-26 Identity = 53/106 (50.00%), Postives = 77/106 (72.64%), Query Frame = 1
Query: 31 FFPDRNNIHGPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGLHQQ 342
F P ++N P F++++ H S+ +FFEAYS+KLN+SV+S+RGTD+GR DLIED+K++ EP++ ++S +FPTIRIWPD T S +IE HE + LFGL +
Sbjct: 1263 FPPTKDNK--PMFDVRIPDNYTQHGSKVEFFEAYSSKLNLSVISVRGTDVGRFRDLIEDVKMFAEPVIFAIISSIFPTIRIWPDVTFSTLIELYHEMMSLFGLSHE 1366
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A485KXN8_9STRA (Aste57867_12985 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KXN8_9STRA) HSP 1 Score: 109 bits (273), Expect = 1.430e-25 Identity = 52/94 (55.32%), Postives = 68/94 (72.34%), Query Frame = 1
Query: 58 GPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
GPDFEI++ H S+ +FFEAYS LNVSV+S+RGTD+GR D IED K++ EP++ +LS +FPTIR+WPD T S +IE HE +FGL
Sbjct: 551 GPDFEIRLPANYTAHGSKVEFFEAYSKALNVSVISVRGTDVGRFRDFIEDAKMYAEPVIFVILSSIFPTIRMWPDVTYSTLIELYHEIASMFGL 644
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A6G0XXD1_9STRA (Lipase_3 domain-containing protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXD1_9STRA) HSP 1 Score: 106 bits (265), Expect = 1.710e-24 Identity = 48/97 (49.48%), Postives = 70/97 (72.16%), Query Frame = 1
Query: 49 NIHGPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
++ P+FEI++ + H S+ +FFEAYS LNVSV+++RGTD+GR D +ED K++ EP++ +LS +FPTIR+WPD T S +IE HE +FGL
Sbjct: 546 SVSDPEFEIRLPENYTAHGSKVEFFEAYSRSLNVSVIAVRGTDVGRFRDFLEDAKMYAEPVIFVILSSIFPTIRMWPDVTFSTLIELYHEMASMFGL 642
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A067CKS2_SAPPC (Lipase_3 domain-containing protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CKS2_SAPPC) HSP 1 Score: 106 bits (265), Expect = 1.710e-24 Identity = 50/96 (52.08%), Postives = 70/96 (72.92%), Query Frame = 1
Query: 61 PDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGLHQQ 342
P F+I++ S+ +FFEAYSA LN+SV+S+RGTD+GR DLIED+K++ EP++ +LS +FPTIR+WPD T S +IE HE + LFGL +
Sbjct: 558 PMFDIRIPDNYTAKGSKVEFFEAYSAALNLSVISVRGTDVGRFRDLIEDVKMFAEPVIFAILSSIFPTIRMWPDVTFSTLIELYHEMMSLFGLSHE 653
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A024UV21_9STRA (Lipase_3 domain-containing protein n=3 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UV21_9STRA) HSP 1 Score: 106 bits (264), Expect = 2.340e-24 Identity = 50/99 (50.51%), Postives = 70/99 (70.71%), Query Frame = 1
Query: 43 RNNIHGPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
R++ P F+I++ + H S+ +FFEAYS LNVSV+S+RGTD+GR D IED K++ EP++ +LS +FPTIR+WPD T S +IE HE +FGL
Sbjct: 544 RSDTEDPRFDIRLPENYTAHSSKVEFFEAYSNDLNVSVISVRGTDVGRFRDFIEDAKMYAEPVIFVILSSIFPTIRMWPDVTFSTLIELYHELATMFGL 642
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: A0A3R7XS02_9STRA (Lipase_3 domain-containing protein (Fragment) n=10 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A3R7XS02_9STRA) HSP 1 Score: 105 bits (261), Expect = 5.880e-24 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 10 LCEVAKQFFPDRNNIHGPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
L + FP + + P F+I++ + H S+ +FFEAYS LNVSV+S+RGTD+GR D IED K++ EP++ +LS +FPTIR+WPD T S +IE HE +FGL
Sbjct: 484 LKDFVASVFPSASAL--PMFDIRLPENYTAHGSKVEFFEAYSKDLNVSVISVRGTDVGRFRDFIEDAKMYAEPVIFVILSSIFPTIRMWPDVTFSTLIELYHEMATMFGL 591
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Match: W4H8U1_9STRA (Lipase_3 domain-containing protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H8U1_9STRA) HSP 1 Score: 105 bits (261), Expect = 5.920e-24 Identity = 52/110 (47.27%), Postives = 73/110 (66.36%), Query Frame = 1
Query: 10 LCEVAKQFFPDRNNIHGPDFEIKVKQG--DHHSRAQFFEAYSAKLNVSVVSIRGTDMGRISDLIEDIKIWVEPMVLEVLSMVFPTIRIWPDSTSSAVIEWLHETLQLFGL 333
L + FP + + P F+I++ + H S+ +FFEAYS LNVSV+S+RGTD+GR D IED K++ EP++ +LS +FPTIR+WPD T S +IE HE +FGL
Sbjct: 535 LKDFVASVFPSASAL--PMFDIRLPENYTAHGSKVEFFEAYSKDLNVSVISVRGTDVGRFRDFIEDAKMYAEPVIFVILSSIFPTIRMWPDVTFSTLIELYHEMATMFGL 642 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig106040.489.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig106040.489.1 >prot_H-elongata_contig106040.489.1 ID=prot_H-elongata_contig106040.489.1|Name=mRNA_H-elongata_contig106040.489.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=114bp QVPLCEVAKQFFPDRNNIHGPDFEIKVKQGDHHSRAQFFEAYSAKLNVSVback to top mRNA from alignment at H-elongata_contig106040:560..2175- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig106040.489.1 ID=mRNA_H-elongata_contig106040.489.1|Name=mRNA_H-elongata_contig106040.489.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1616bp|location=Sequence derived from alignment at H-elongata_contig106040:560..2175- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig106040:560..2175- >mRNA_H-elongata_contig106040.489.1 ID=mRNA_H-elongata_contig106040.489.1|Name=mRNA_H-elongata_contig106040.489.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=684bp|location=Sequence derived from alignment at H-elongata_contig106040:560..2175- (Himanthalia elongata Himel1 dioecious)back to top |