mRNA_H-elongata_contig181929.4875.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A6H5JWI1_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWI1_9PHAE) HSP 1 Score: 165 bits (417), Expect = 1.940e-48 Identity = 83/105 (79.05%), Postives = 89/105 (84.76%), Query Frame = 1
Query: 1 ADSSTTSIIMNSVRMELEAFQASTGIKMHELDKEGTKVYLDPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRHS 315
ADSS +I +SVR+EL AF+ STGIKM+E DKEG KVYLDPLDWWRVR DFPHLANLAR VL IPA QAESER+ SCAGNI TKNRNNL PTTVELLVLLRHS
Sbjct: 182 ADSSFVRLITSSVRVELTAFKVSTGIKMYEEDKEGAKVYLDPLDWWRVRCADFPHLANLARRVLAIPATQAESERLFSCAGNIVTKNRNNLAPTTVELLVLLRHS 286
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A6H5JPB0_9PHAE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPB0_9PHAE) HSP 1 Score: 95.9 bits (237), Expect = 2.690e-22 Identity = 47/55 (85.45%), Postives = 49/55 (89.09%), Query Frame = 1
Query: 151 TDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRHS 315
TDFPHLANLAR VL IPA QA+SER+ SCAGNI TKNRNNL PTTVELLVLLRHS
Sbjct: 152 TDFPHLANLARRVLAIPATQAKSERLFSCAGNIVTKNRNNLAPTTVELLVLLRHS 206
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 75.9 bits (185), Expect = 7.430e-14 Identity = 36/64 (56.25%), Postives = 44/64 (68.75%), Query Frame = 1
Query: 37 VRMELEAFQASTGIKMHELDKEGTKVYLDPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERV 228
V +E+ +FQ + GI + +G KVY DPLDWWR R +FPHLA LAR VL IP+ QA SERV
Sbjct: 486 VDLEVASFQTTPGISIWYWGTDGKKVYNDPLDWWRTRQMEFPHLAALARRVLAIPSSQAHSERV 549
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A1X7SR93_AMPQE (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Amphimedon queenslandica TaxID=400682 RepID=A0A1X7SR93_AMPQE) HSP 1 Score: 67.8 bits (164), Expect = 3.010e-12 Identity = 31/62 (50.00%), Postives = 39/62 (62.90%), Query Frame = 1
Query: 121 DPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLL 306
D +WWR FPHL+++AR +L IPA SER+ S AG I TK R NL P V++LV L
Sbjct: 67 DVFEWWRKNQEMFPHLSDIARKLLCIPATSVPSERIFSVAGGIVTKKRTNLKPENVDMLVFL 128
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A2D4C1W9_PYTIN (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C1W9_PYTIN) HSP 1 Score: 66.6 bits (161), Expect = 6.850e-11 Identity = 36/82 (43.90%), Postives = 43/82 (52.44%), Query Frame = 1
Query: 70 TGIKMHELDKEGTKVYLDPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRHS 315
TG ++ D + PLDWWR R DFPH+A LAR L A SER S AGN+ T R +L P V LV L H+
Sbjct: 184 TGQQVTAEDLNAAVFNIKPLDWWRDRANDFPHVARLARRWLSCVATSVLSERAFSTAGNVITAKRGSLRPELVRDLVFLAHN 265
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: X1X2X7_ACYPI (Dimer_Tnp_hAT domain-containing protein n=5 Tax=Aphidinae TaxID=133076 RepID=X1X2X7_ACYPI) HSP 1 Score: 66.6 bits (161), Expect = 1.280e-10 Identity = 29/66 (43.94%), Postives = 41/66 (62.12%), Query Frame = 1
Query: 118 LDPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRHS 315
LDPL+WW+ RY+ +P + LA+ + I A +ER S AGNI T+ R +L+P V LLV L +
Sbjct: 409 LDPLEWWKTRYSKYPTIGKLAKKYMAITATSVSAERCFSTAGNIVTRKRASLSPENVNLLVFLHQN 474
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: UPI001C1CE2AD (Hypothetical protein n=1 Tax=Rhizophagus irregularis TaxID=588596 RepID=UPI001C1CE2AD) HSP 1 Score: 64.3 bits (155), Expect = 3.540e-10 Identity = 27/62 (43.55%), Postives = 41/62 (66.13%), Query Frame = 1
Query: 127 LDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRH 312
L WW++ ++PHLAN+A+ L +PA A SER+ S A N+ T +R +L P TV ++ L+H
Sbjct: 167 LKWWKLHEEEYPHLANMAKDYLGVPATSASSERIFSSAANVITYDRASLAPETVRSVMYLKH 228
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A094DPG2_9PEZI (Dimer_Tnp_hAT domain-containing protein n=3 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094DPG2_9PEZI) HSP 1 Score: 60.5 bits (145), Expect = 8.220e-10 Identity = 28/64 (43.75%), Postives = 43/64 (67.19%), Query Frame = 1
Query: 121 DPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRH 312
D L +W+ + +P +A++A+ L IPA A+SERV S G+I TK RN L+P+T+ L+ LR+
Sbjct: 11 DILKYWQSKQYQYPLIASIAKDYLAIPATSADSERVFSVGGDIITKKRNQLSPSTLRYLLCLRN 74
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: A0A819YBE0_9BILA (Hypothetical protein n=1 Tax=Rotaria sp. Silwood2 TaxID=2762512 RepID=A0A819YBE0_9BILA) HSP 1 Score: 63.2 bits (152), Expect = 9.760e-10 Identity = 33/63 (52.38%), Postives = 44/63 (69.84%), Query Frame = 1
Query: 121 DPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLR 309
+PL +W+V+ LAN+A+S+LVIPA AESER S AG I T+ R+ L P TVE LV+L+
Sbjct: 154 NPLSFWKVQKDTIGLLANIAKSLLVIPASSAESERHFSIAGQIVTEQRSLLDPDTVEALVVLK 216
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Match: U1GF76_ENDPU (Dimer_Tnp_hAT domain-containing protein n=1 Tax=Endocarpon pusillum (strain Z07020 / HMAS-L-300199) TaxID=1263415 RepID=U1GF76_ENDPU) HSP 1 Score: 63.5 bits (153), Expect = 1.580e-9 Identity = 32/64 (50.00%), Postives = 42/64 (65.62%), Query Frame = 1
Query: 121 DPLDWWRVRYTDFPHLANLARSVLVIPAIQAESERVLSCAGNIGTKNRNNLTPTTVELLVLLRH 312
D + WWR + FP LA LA ++L IPA+ AE ERV S A + T NRN+L+P TVE+ LR+
Sbjct: 499 DLIAWWREQEASFPLLATLAYTILAIPAMSAECERVFSSAKLLITPNRNHLSPDTVEMSECLRN 562 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig181929.4875.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig181929.4875.1 >prot_H-elongata_contig181929.4875.1 ID=prot_H-elongata_contig181929.4875.1|Name=mRNA_H-elongata_contig181929.4875.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=96bp MNSVRMELEAFQASTGIKMHELDKEGTKVYLDPLDWWRVRYTDFPHLANLback to top mRNA from alignment at H-elongata_contig181929:603..917+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig181929.4875.1 ID=mRNA_H-elongata_contig181929.4875.1|Name=mRNA_H-elongata_contig181929.4875.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=315bp|location=Sequence derived from alignment at H-elongata_contig181929:603..917+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig181929:603..917+ >mRNA_H-elongata_contig181929.4875.1 ID=mRNA_H-elongata_contig181929.4875.1|Name=mRNA_H-elongata_contig181929.4875.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=576bp|location=Sequence derived from alignment at H-elongata_contig181929:603..917+ (Himanthalia elongata Himel1 dioecious)back to top |