mRNA_H-elongata_contig180882.4828.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: D7G8X7_ECTSI (UBC core domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8X7_ECTSI) HSP 1 Score: 145 bits (366), Expect = 3.360e-43 Identity = 64/70 (91.43%), Postives = 69/70 (98.57%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
++TPF GGCFNLEIEFPAEYPFKAPKV+FVTRIYHPNVKTD+GEICSDILNENWGPTLNVTYVLNTIRQ+
Sbjct: 40 DDTPFGGGCFNLEIEFPAEYPFKAPKVRFVTRIYHPNVKTDSGEICSDILNENWGPTLNVTYVLNTIRQM 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A6V1MVK4_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1MVK4_HETAK) HSP 1 Score: 127 bits (319), Expect = 4.600e-36 Identity = 52/69 (75.36%), Postives = 63/69 (91.30%), Query Frame = 1
Query: 10 NTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
NTP+ GG FNLE++FPAEYPFKAPKVKF+TRIYHPN+KTD+GEIC+D++NENWGPTLN YVL I+Q+
Sbjct: 41 NTPYEGGVFNLELDFPAEYPFKAPKVKFLTRIYHPNIKTDSGEICADLINENWGPTLNTQYVLTVIKQL 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A835YRR6_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRR6_9STRA) HSP 1 Score: 122 bits (306), Expect = 4.350e-34 Identity = 52/70 (74.29%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
+ TP+ GG FN+ +EFPAEYPFKAPKVKF TRIYHP+V+T TGEIC+D+L NWGPTLNVT+VLNTIRQ+
Sbjct: 40 DGTPYEGGIFNISLEFPAEYPFKAPKVKFQTRIYHPHVRTATGEICADVLLNNWGPTLNVTFVLNTIRQM 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: G4YF85_PHYSP (UBC core domain-containing protein n=17 Tax=Peronosporaceae TaxID=4777 RepID=G4YF85_PHYSP) HSP 1 Score: 119 bits (298), Expect = 7.140e-33 Identity = 47/70 (67.14%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
E++P+SGG FNL+++FP+EYPFKAPKV+F+TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q+
Sbjct: 40 EDSPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQI 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A835Z9K8_9STRA (Ubiquitin-conjugating enzyme/RWD-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9K8_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.440e-32 Identity = 48/70 (68.57%), Postives = 64/70 (91.43%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
+N+P++GG F L+IE EYPFKAPKVKF+TRIYHPN++T+ GEIC+DILN+NWGPTLN+++VLNT+RQ+
Sbjct: 40 DNSPYAGGVFQLDIEMSPEYPFKAPKVKFLTRIYHPNIRTEGGEICADILNDNWGPTLNLSHVLNTLRQM 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: H3G6N1_PHYRM (UBC core domain-containing protein n=8 Tax=Phytophthora TaxID=4783 RepID=H3G6N1_PHYRM) HSP 1 Score: 117 bits (292), Expect = 1.760e-32 Identity = 46/68 (67.65%), Postives = 62/68 (91.18%), Query Frame = 1
Query: 13 TPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
+P+SGG FNL+++FP+EYPFKAPKV+F+TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q+
Sbjct: 1 SPYSGGVFNLDLQFPSEYPFKAPKVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVMHCLTAIKQI 68
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A024U3D9_9STRA (UBC core domain-containing protein n=4 Tax=Aphanomyces TaxID=100860 RepID=A0A024U3D9_9STRA) HSP 1 Score: 116 bits (290), Expect = 1.170e-31 Identity = 46/70 (65.71%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
ENTP++GG F++++ FPAEYPFKAPKVKF+TR+YHPNVK+ +GEIC+DI+NE+WGPTLNV + L ++Q+
Sbjct: 40 ENTPYAGGVFSIDLVFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADIINESWGPTLNVLHCLTALKQM 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: K3W7Y2_GLOUD (UBC core domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W7Y2_GLOUD) HSP 1 Score: 116 bits (290), Expect = 1.170e-31 Identity = 45/70 (64.29%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
EN+P+SGG F+++++FP EYPFKAP+V+F+TR+YHPNVK+ +GEIC+DI+NENWGPTLNV + L I+Q+
Sbjct: 40 ENSPYSGGVFSIDLQFPNEYPFKAPRVRFLTRVYHPNVKSQSGEICADIINENWGPTLNVLHCLTAIKQI 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A067CHA9_SAPPC (UBC core domain-containing protein n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A067CHA9_SAPPC) HSP 1 Score: 115 bits (289), Expect = 1.660e-31 Identity = 44/70 (62.86%), Postives = 63/70 (90.00%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
+N+P++GG F++++ FPAEYPFKAPKVKF+TR+YHPNVK+ +GEIC+D++NENWGPTLNV + L ++Q+
Sbjct: 40 DNSPYAGGVFSIDLLFPAEYPFKAPKVKFLTRVYHPNVKSQSGEICADVINENWGPTLNVMFCLTALKQI 109
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Match: A0A2D4CAW9_PYTIN (UBC core domain-containing protein n=2 Tax=Pythium TaxID=4797 RepID=A0A2D4CAW9_PYTIN) HSP 1 Score: 113 bits (283), Expect = 1.360e-30 Identity = 43/70 (61.43%), Postives = 62/70 (88.57%), Query Frame = 1
Query: 7 ENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDILNENWGPTLNVTYVLNTIRQV 216
E++P+SGG F+L+++FP EYPFKAPK++F+T++YHPN+KT +GEIC+DI+NENW PTLNV + L I+Q+
Sbjct: 40 EDSPYSGGVFSLDLQFPNEYPFKAPKIRFLTKVYHPNIKTSSGEICADIINENWAPTLNVLHCLQAIKQI 109 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180882.4828.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig180882.4828.1 >prot_H-elongata_contig180882.4828.1 ID=prot_H-elongata_contig180882.4828.1|Name=mRNA_H-elongata_contig180882.4828.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=75bp MQENTPFSGGCFNLEIEFPAEYPFKAPKVKFVTRIYHPNVKTDTGEICSDback to top mRNA from alignment at H-elongata_contig180882:98..1212- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig180882.4828.1 ID=mRNA_H-elongata_contig180882.4828.1|Name=mRNA_H-elongata_contig180882.4828.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=1115bp|location=Sequence derived from alignment at H-elongata_contig180882:98..1212- (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig180882:98..1212- >mRNA_H-elongata_contig180882.4828.1 ID=mRNA_H-elongata_contig180882.4828.1|Name=mRNA_H-elongata_contig180882.4828.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=450bp|location=Sequence derived from alignment at H-elongata_contig180882:98..1212- (Himanthalia elongata Himel1 dioecious)back to top |