prot_H-elongata_contig180785.4823.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig180785.4823.1
Unique Nameprot_H-elongata_contig180785.4823.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length135
Homology
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: D8LUC7_ECTSI (Alb3 homolog, thylakoidal inner membrane insertase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LUC7_ECTSI)

HSP 1 Score: 204 bits (518), Expect = 1.680e-61
Identity = 98/135 (72.59%), Postives = 115/135 (85.19%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            RSLLNLAKE+KLTESFLWIPSLEGPTF+SPPTEMM+WIK+W+DG PKLGWHDT+AY+TIP+ILV+TQ++S +IMQP KDP+ P           +Q A  N  ++KFLPL+IGWFSLSVPSALGLYWILNNFIST
Sbjct:  220 RSLLNLAKENKLTESFLWIPSLEGPTFDSPPTEMMSWIKDWSDGAPKLGWHDTIAYMTIPIILVITQSISTRIMQPAKDPSQPVDE--------SQAASQN--IVKFLPLMIGWFSLSVPSALGLYWILNNFIST 344          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A835YLS0_9STRA (Alb3-like protein, thylakoidal inner membrane insertase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS0_9STRA)

HSP 1 Score: 168 bits (425), Expect = 7.070e-48
Identity = 80/135 (59.26%), Postives = 99/135 (73.33%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R+LLNLAKE+KL E FLW+PSLEGP F +PPTE +NWIK W +GVP LGWHDTL YL+IPVILV+TQ++S +++ P K   A               A  +  +LK+LPLLIGWFSL+VPS LGLYWI+NN +ST
Sbjct:  209 RALLNLAKENKLDEGFLWLPSLEGPVFGAPPTESLNWIKTWENGVPALGWHDTLCYLSIPVILVITQSISQQLISPPKKEGA--------------EADTSQAILKYLPLLIGWFSLNVPSGLGLYWIVNNIVST 329          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A7S1FKR9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FKR9_9STRA)

HSP 1 Score: 148 bits (374), Expect = 2.330e-40
Identity = 73/136 (53.68%), Postives = 95/136 (69.85%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWI-KEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R++L+LAKEDKL + FLW+P+LEGPT+ + P    +WI K W DG P LGW DT+A+L+IP+IL++ QAVS ++MQP K+P+ P                 N  VLK LPLLIGWFSL+VPSALG+YWI N  +ST
Sbjct:  246 RAVLDLAKEDKLEQPFLWLPNLEGPTYGADPAHASDWILKGWHDGAPSLGWEDTIAFLSIPLILIVLQAVSTQLMQPPKNPDDP-------------NDPSNNVVLKALPLLIGWFSLNVPSALGIYWITNTLVST 368          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A7S2XXH5_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXH5_9STRA)

HSP 1 Score: 145 bits (365), Expect = 8.260e-39
Identity = 71/136 (52.21%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKE-WTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R+LLNLA E+KL E+FLW+PSL+GPT+ + P + MNW+K  W DGVP LGW DTLA+LT+PVILV++Q +S +IMQP   P  P                 N  + K LPL+IG+FSL+VPS L +YW+ NNF++T
Sbjct:  210 RALLNLAAEEKLNEAFLWLPSLDGPTYGASPADGMNWLKTGWEDGVPPLGWPDTLAFLTLPVILVISQYISTQIMQPKVKPGEPDPMEQ------------NQLLFKVLPLMIGYFSLNVPSGLAIYWVANNFLTT 333          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A7S2H5X8_9STRA (Hypothetical protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2H5X8_9STRA)

HSP 1 Score: 144 bits (362), Expect = 2.160e-38
Identity = 72/137 (52.55%), Postives = 95/137 (69.34%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWI-KEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPV-KDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R++LNLAKE+ L ESFLW+P+LEGPT+ + P    +WI K W DGVP LGW DTLA+L IP+ILV++Q  SM+IMQP  +DP     N                 +LKFLP +IG+FSL+VP+ALG+YW+ NNF++T
Sbjct:  235 RAVLNLAKENALDESFLWLPNLEGPTYGADPASGSDWIFKNWVDGVPSLGWDDTLAFLAIPLILVVSQYASMQIMQPKSQDPQQQQAN----------------AILKFLPFMIGYFSLNVPAALGIYWVTNNFVTT 355          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: W7U5Y4_9STRA (Membrane insertion protein, OxaA/YidC n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U5Y4_9STRA)

HSP 1 Score: 142 bits (358), Expect = 4.130e-38
Identity = 63/135 (46.67%), Postives = 95/135 (70.37%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R+L NLA  ++L E FLW+P+LEGPT+ + P + MNW+K+W    P LGWHDT+A+LT+P+IL+++Q++S +I+QP  + + P   +S+              +LKFLP ++G+FSL+VPS LG+YWI NN I+T
Sbjct:  259 RALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQ-------------AILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 380          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A7S2EC37_9STRA (Hypothetical protein n=5 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S2EC37_9STRA)

HSP 1 Score: 142 bits (359), Expect = 7.280e-38
Identity = 71/137 (51.82%), Postives = 95/137 (69.34%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWI-KEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPV-KDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R++LNLAK D L E FLW+P+LEGPT+ + PT   +W+ K W DG P LGW +T+A+L IPVILV++Q VSM++MQP  +DP     N                 +LKFLPL+IG+FSLSVP+ALG+YW+ NNF++T
Sbjct:  247 RAVLNLAKADALDEPFLWLPNLEGPTYGADPTTGSDWLFKNWVDGTPSLGWDNTVAFLAIPVILVISQFVSMQLMQPKSEDPQQQQAN----------------AILKFLPLMIGYFSLSVPAALGIYWVTNNFVTT 367          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: K8YSD2_NANGC (Preprotein translocase subunit YidC n=2 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YSD2_NANGC)

HSP 1 Score: 142 bits (358), Expect = 1.270e-37
Identity = 63/135 (46.67%), Postives = 95/135 (70.37%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R+L NLA  ++L E FLW+P+LEGPT+ + P + MNW+K+W    P LGWHDT+A+LT+P+IL+++Q++S +I+QP  + + P   +S+              +LKFLP ++G+FSL+VPS LG+YWI NN I+T
Sbjct:  221 RALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFTPSLGWHDTIAFLTVPLILIVSQSISQQILQPAANKDDPNAQQSQ-------------AILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 342          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: K0SWS0_THAOC (Uncharacterized protein n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0SWS0_THAOC)

HSP 1 Score: 137 bits (345), Expect = 3.630e-37
Identity = 66/136 (48.53%), Postives = 94/136 (69.12%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWI-KEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            RS+LNLAKE+ L E FL++P+LEGPT+ + P    +WI K W DGVP LGW DT+A+L+IP+ LV++Q VSM +MQP  D   P   ++ +             +LK LP ++GWF+L+VPSALG+YW++NN ++T
Sbjct:   78 RSVLNLAKENALDEPFLFLPNLEGPTYGADPAHGSDWILKNWVDGVPSLGWEDTIAFLSIPIFLVISQFVSMNLMQPKSDD--PQQQQANI-------------ILKVLPFMVGWFALNVPSALGIYWVVNNVVTT 198          
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Match: A0A4D9D9H4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D9H4_9STRA)

HSP 1 Score: 140 bits (354), Expect = 1.750e-36
Identity = 65/138 (47.10%), Postives = 95/138 (68.84%), Query Frame = 0
Query:    1 RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGWHDTLAYLTIPVILVLTQAVSMKIMQPV---KDPNAPWTNRSKLLKMRAQRACHNTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST 135
            R+L NLA  ++L E FLW+P+LEGPT+ + P + MNW+K+W    P LGWHDT+A+LT+P+IL+++Q++S +I+QP    +DPNA                  +  +LKFLP ++G+FSL+VPS LG+YWI NN I+T
Sbjct:  321 RALTNLAAANELNEPFLWLPNLEGPTYGAGPADGMNWLKQWEGFNPSLGWHDTIAFLTVPLILIVSQSISQQILQPAASKEDPNAQ----------------QSQAILKFLPFMVGYFSLNVPSGLGVYWIANNLITT 442          
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig180785.4823.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LUC7_ECTSI1.680e-6172.59Alb3 homolog, thylakoidal inner membrane insertase... [more]
A0A835YLS0_9STRA7.070e-4859.26Alb3-like protein, thylakoidal inner membrane inse... [more]
A0A7S1FKR9_9STRA2.330e-4053.68Hypothetical protein (Fragment) n=1 Tax=Corethron ... [more]
A0A7S2XXH5_9STRA8.260e-3952.21Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S2H5X8_9STRA2.160e-3852.55Hypothetical protein n=1 Tax=Helicotheca tamesis T... [more]
W7U5Y4_9STRA4.130e-3846.67Membrane insertion protein, OxaA/YidC n=1 Tax=Nann... [more]
A0A7S2EC37_9STRA7.280e-3851.82Hypothetical protein n=5 Tax=Ditylum brightwellii ... [more]
K8YSD2_NANGC1.270e-3746.67Preprotein translocase subunit YidC n=2 Tax=Nannoc... [more]
K0SWS0_THAOC3.630e-3748.53Uncharacterized protein n=1 Tax=Thalassiosira ocea... [more]
A0A4D9D9H4_9STRA1.750e-3647.10Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PFAMPF0209660KD_IMPcoord: 18..134
e-value: 8.5E-11
score: 42.0
IPR001708Membrane insertase YidC/ALB3/OXA1/COX18PANTHERPTHR12428OXA1coord: 1..135
NoneNo IPR availablePANTHERPTHR12428:SF40ALBINO3-LIKE PROTEIN 1, CHLOROPLASTICcoord: 1..135
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 107..129
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 72..106
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 130..135
NoneNo IPR availableTMHMMTMhelixcoord: 107..129

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig180785contigH-elongata_contig180785:4..1255 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig180785.4823.1mRNA_H-elongata_contig180785.4823.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig180785 4..1255 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig180785.4823.1 ID=prot_H-elongata_contig180785.4823.1|Name=mRNA_H-elongata_contig180785.4823.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=135bp
RSLLNLAKEDKLTESFLWIPSLEGPTFNSPPTEMMNWIKEWTDGVPKLGW
HDTLAYLTIPVILVLTQAVSMKIMQPVKDPNAPWTNRSKLLKMRAQRACH
NTTVLKFLPLLIGWFSLSVPSALGLYWILNNFIST
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001708YidC/ALB3/OXA1/COX18