mRNA_H-elongata_contig17746.4666.1 (mRNA) Himanthalia elongata Himel1 dioecious
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Overview
Homology
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: D8LE22_ECTSI (Probable glycine-sarcosine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE22_ECTSI) HSP 1 Score: 285 bits (730), Expect = 1.170e-87 Identity = 148/271 (54.61%), Postives = 191/271 (70.48%), Query Frame = 3
Query: 90 EVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFPDHGPSPSG----YTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKKKA 890
+ WG IH+GRYDLL + + + RIKRA+ L+T LL K FP PSP G T+MDMGS++G AR A+ +GC VVCI++S N N KL+AAAGLS+K+IIPGERSYFDT+MPA+SMD V+SQDAF HASTEHH+AIKEAARVLKPGG+ FSD M SD D TKL E+Y++I I LA+PG Y+ WG +GLE VE+D+ SN + HY L +VI +RG++ GV+ +LD MT RY + AA+ +L G++V KK +
Sbjct: 2 QAWGE-DIHIGRYDLLSTDELKMGPRERIKRATALSTRGLLGKVFP---PSPGGETTIMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNAVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGHASTEHHRAIKEAARVLKPGGVMAFSDFMQSDDADPTKLGEVYQHIGISRLASPGLYEEWGNAYGLEPVEFDDRTSNFSVHYQHLVDVIASLRGTIKGVDDEFLDRMTSRYGSWCVAAEFDVLRWGVIVLKKSS 268
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A6H5KC33_9PHAE (Methyltransf_11 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KC33_9PHAE) HSP 1 Score: 260 bits (665), Expect = 4.570e-74 Identity = 134/302 (44.37%), Postives = 185/302 (61.26%), Query Frame = 3
Query: 6 LSTKGGVGTIEATAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFP---------DHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKK 884
++T + I + A+DYYD+ NA +++VWGG IHVG Y +G+D L RI +AS L TE LL + FP + P S TMMDMGS YG AR A+ GC+VVCI ++ N N +T AGL +KVI+PGE+S+F+T MP +S D+V SQDA +HA +E H+A+ EAARVLKPGG VF+D+M S D L E+Y+ I + +A P SY +WG+ GLEFVE+ + N+A HY ++ EV+ RG++ GVE ++D M A +AA L+ G +VF K
Sbjct: 6 VATSDKIDEISSVAKDYYDSDNAFNFYRQVWGGEHIHVGLYTRFEGEDVELKGVDRISKASSLCTEELLSRCFPAVATVTSNGEAAPPASECTMMDMGSGYGGTARAAAKKLGCKVVCINVASRENEINTAITKDAGLQDKVIVPGEKSFFETGMPDASCDVVTSQDALLHAGSERHRALGEAARVLKPGGRMVFTDIMQSKEADPKDLQEVYQRIHLDDMATPESYAKWGKAHGLEFVEFVDMTDNLALHYGAVREVLMSRRGNLDGVEDEFIDNMARGLDAWTSAAGRDLIRWGCLVFTK 307
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: D7G7W9_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7W9_ECTSI) HSP 1 Score: 234 bits (596), Expect = 6.300e-66 Identity = 123/280 (43.93%), Postives = 175/280 (62.50%), Query Frame = 3
Query: 60 DNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFPD----HGPSPSGY-TMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKK 884
++S AI H EVWGG IH+G + L+G+ L RIK+AS L+TE +L + FP +G PS TM+D+G YG AR A+ GC+VVCI +S N N+ +T AGL +KVI+PGE+S+F+T +P +S D+V SQDA +H+ E H+++ EAARVLKPGG VFSD+M TD L ++Y + ++ P Y +WG+ GLEFVE+ + A N+ATHY S+ +V+ RG++ GVE ++D M A +AA+ L+ G M F K
Sbjct: 2 NSSEAIFQH-EVWGGEHIHIGLHSKLEGEHVKLEGVERIKKASSLSTEEILSRCFPSGTNGNGAPPSAECTMVDLGCGYGGTARVAAKKLGCKVVCINVSKRENETNVAMTKEAGLQDKVIVPGEKSFFETGLPDASCDVVASQDALLHSGPERHRSMAEAARVLKPGGRMVFSDIMQFKETDPKDLQDVYNRCHLEDMSTPEEYIKWGKVHGLEFVEFVDMAENLATHYGSVRDVLVSRRGNLEGVEDEFIDNMVRGIEAWISAAQRNLICWGYMTFTK 280
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: D7G5Z7_ECTSI (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Z7_ECTSI) HSP 1 Score: 237 bits (604), Expect = 3.810e-65 Identity = 125/305 (40.98%), Postives = 179/305 (58.69%), Query Frame = 3
Query: 3 ELSTKGGVGTIEATAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFP-----------DHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKK 884
+ S I ATA+ +Y++ NA + +VWGG IHVG Y L ++A L RIK+AS L E LL + FP D P S TM+DMGS YG AR A++ GC+V CI ++ N N L+ AAG+ + VIIPGE+SYFDT +P + ++V SQDA +HA +E H+A+ EAAR+LKPGG VF+D+M ++ D L E+Y+ + + L P SY +W E +GL FVE+ + ++ THY S+ EV+ RG+ G+E ++D M A +AA+ L+ G + F K
Sbjct: 317 DSSDDNATDAISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAEELLARCFPASANGTNGTNGDGAPHTSESTMVDMGSGYGGSARLAAKTLGCKVYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLQEVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERDLICWGYVTFAK 621
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A835YZA4_9STRA (Putative sarcosine-dimethylglycine methyltransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YZA4_9STRA) HSP 1 Score: 224 bits (570), Expect = 6.100e-64 Identity = 121/285 (42.46%), Postives = 173/285 (60.70%), Query Frame = 3
Query: 33 IEATAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFPDHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKKK 887
I AQ YYD+ +A +K+VWGG IHVG YD + D+ + RIK ASEL+ + L A P S +MDMGS+YG AR A++YGC V CI++S N N TAA GL++KV+IPGERS+F+T PA + D VVSQD+ +HA +E +AI+EAARVLKPGG VF+D+M S+ + +L +Y+ I + + +P SY+ W E GL+ V +++ SN+A HY ++ V++ R + + Y+D M A NAA L G +F+K+
Sbjct: 13 INDVAQQYYDSEDAFNFYKQVWGGSFIHVGLYDDPQVTDS-MDPMERIKLASELSAKRLFATA----EPLDSSSKVMDMGSAYGGNARLCAKTYGCTVTCIDISCKENEVNRSTTAAEGLADKVLIPGERSFFETGEPAGAYDAVVSQDSLLHAGSERCRAIEEAARVLKPGGCLVFTDIMQSNDANTAELDAVYRRIHLEDMGSPASYQAWAERCGLKLVGFEDRTSNLAAHYGAVKGVLEAKRAELTNISPAYVDNMIRGLDAWVNAAGKSNLCWGYFLFRKQ 292
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A6H5L7A2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7A2_9PHAE) HSP 1 Score: 219 bits (558), Expect = 2.820e-59 Identity = 123/317 (38.80%), Postives = 178/317 (56.15%), Query Frame = 3
Query: 33 IEATAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFP-----------DHGPSPSGYTMMDMGSSYGHLARKVAESYGCR---VVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLA-------------------EVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKK 884
I ATA+ +Y++ NA + +VWGG IHVG Y L ++A L RIK+AS L E LL + FP + P S TM+DMGS YG AR A++ GC+ V CI ++ N N L+ AAG+ + VIIPGE+SYFDT +P + ++V SQDA +HA +E H+A+ EAAR+LKPGG VF+D+M ++ D L ++Y+ + + L P SY +W E +GL FVE+ + ++ THY S+ EV+ RG+ G+E ++D M A +AA+ GL+ G + F K
Sbjct: 181 ISATAEGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIKKASILNAEELLARCFPASANGTNGTNGNGAPPTSESTMVDMGSGYGGSARLAAKTLGCKAMNVYCINVTSRENDVNRALSKAAGIEDLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNHADPKDLKDVYERVRLQDLGTPKSYAKWAESYGLTFVEFSDRTPDMKTHYESVGLRRFQFKADGQNIAALAVKEVLMSHRGTSDGMEDEFIDNMARGLDAWVSAAERGLICWGYVTFAK 497
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A6T8NTF3_HEMAN (Hypothetical protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6T8NTF3_HEMAN) HSP 1 Score: 211 bits (538), Expect = 4.770e-59 Identity = 114/288 (39.58%), Postives = 179/288 (62.15%), Query Frame = 3
Query: 42 TAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRAS-ELATEMLLRKAFPDHGPSPS---GYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVE--IYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLAEVIKDVRGSMAGVESRYLDWMTVRYSACANAAKHGLLTSGLMVFKKK 887
TAQ+YYD+ +A +K VWGG IHVG YD+++ K + +AS L+TE L + PS + G + DMG++YG AR A YGC+V+C+E+S N N K TA AGL +KV+IP E S+FDT+ ++SMD+VVSQD+ +HA +E HK I+EA+R+LK GG FVF+D+M SD+ D L + K I + + +P YK+ + GL+FV++++ + + HY +++++++ RG ++ ++++D M SA A +G L G +VF+K+
Sbjct: 33 TAQNYYDSDDAFIFYKHVWGGEAIHVGLYDVVQRKGEGIEADIEWSKASARLSTEQLFTQV-----PSQTLKEGMMVCDMGAAYGEAARHCASKYGCKVLCVEVSKKENEFNRKKTAEAGLQDKVLIPKELSFFDTEAESTSMDLVVSQDSLLHAGSERHKVIEEASRILKKGGYFVFTDIMQSDSCDPEVLASTGVLKRIHLENMGSPEVYKKHAADNGLKFVKFEDRTACIVHHYGTVSKILEAKRGELS-CSAQFVDNMLAGLSAWVAAGDNGSLCWGFLVFQKE 314
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A6H5L6E6_9PHAE (Methyltransf_11 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L6E6_9PHAE) HSP 1 Score: 201 bits (512), Expect = 1.960e-54 Identity = 106/260 (40.77%), Postives = 153/260 (58.85%), Query Frame = 3
Query: 9 STKGGVGTIEATAQDYYDNSNAIKVHKEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFP-----------DHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVV---CIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFGLEFVEYDEYASNVATHYASLA 746
S I ATA+ +Y++ NA + +VWGG IHVG Y L ++A L RI++AS L E LL + FP + P S TM+DMGS YG AR A++ GC+ + CI ++ N N L+ AAG+ VIIPGE+SYFDT +P + ++V SQDA +HA +E H+A+ EAAR+LKPGG VF+D+M ++ D L E+Y+ + + L P SY +W +GL FVE+ + ++ THY S++
Sbjct: 116 SDDNATDAISATAKGWYNSDNAFNFYFKVWGGEHIHVGLYSKLNAEEAKLPVLDRIEKASILNAEELLARCFPASANGTNGTNGNGAPPTSESTMVDMGSGYGGSARLAAKTLGCKAIVVYCINVTSRENDVNRALSKAAGIENLVIIPGEKSYFDTGLPDACCEVVTSQDALLHAGSERHRAVGEAARLLKPGGRMVFNDVMQTNNADPKDLQEVYERVRLQDLGTPKSYAKWAASYGLTFVEFSDRTPDMKTHYESVS 375
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: A0A6H5KZ03_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZ03_9PHAE) HSP 1 Score: 160 bits (406), Expect = 1.400e-42 Identity = 84/145 (57.93%), Postives = 106/145 (73.10%), Query Frame = 3
Query: 87 KEVWGGITIHVGRYDLLKGKDANLAEKARIKRASELATEMLLRKAFPDHGPSPSG---YTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHK 512
++ WG IH+GRYDLL + + + RIKRA+ L+T LL K FP PSP G T+MDMGS++G AR A+ +GC VVCI++S N N KL+AAAGLS+K+IIPGERSYFDT+MPA+SMD V+SQDAF HASTEHH+
Sbjct: 3 QQAWGE-DIHIGRYDLLSMDELKMGPRERIKRATALSTRGLLGKVFP---PSPGGETTMTVMDMGSAHGSTARTAAKEHGCNVVCIDISRGFNTVNAKLSAAAGLSDKIIIPGERSYFDTEMPAASMDAVLSQDAFGHASTEHHR 143
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Match: L1JQG8_GUITC (Methyltransf_11 domain-containing protein n=2 Tax=Geminigeraceae TaxID=589343 RepID=L1JQG8_GUITC) HSP 1 Score: 161 bits (407), Expect = 8.830e-41 Identity = 94/295 (31.86%), Postives = 145/295 (49.15%), Query Frame = 3
Query: 54 YYDNSNAIKVHKEVWGGITIHVGRYDLLK----------GKDANLAEKARIKRASELATEMLLRKAFPDHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAANMENLKLTAAAGLSEKVIIPGERSYFDTQMPASSMDIVVSQDAFMHASTEHHKAIKEAARVLKPGGIFVFSDLMSSDTTDKTKLVEIYKNIEIVGLANPGSYKRWGEEFG------LEFVEYDEYASNVATHYASLAEVIKD-VRGSMAG-VESRYLDWMTVRYSACANAAKHGLLTSGLMVFKK 884
YYD +A + +WGG HVG Y + G E I AS + E +L + P G M DMG++YG AR +++ YGC+VVC+ELS N N++ + +K+I+PGE S+ DTQ A D VS+D+ +HA + EAARVL+ GG+FVFSD+M D D + L ++Y I + + +P Y W + G + Y++++ +A HY + ++++ R + G V Y+ M A A+ G + G VF+K
Sbjct: 4 YYDEGDAFNFYLTIWGGDHCHVGIYTAEEEAQDMQPPAGGVKGESTESDTILLASNRSLEKILELSKPAFEGRSEGLAM-DMGAAYGGCARALSKKYGCKVVCVELSKRENEVNIQRNVELKMQDKIIVPGELSFLDTQQEAGVFDCCVSEDSILHAGKARPAVVAEAARVLRKGGLFVFSDIMQKDCVDTSTLKDVYDRIGLEDMGSPAKYIEWASQAGKLLASSFQLKRYEDFSPQIAVHYGKILKMLEGPTREKLRGKVSDEYIVSMMKGLRAWVAASHAGSIVWGFFVFEK 297 The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17746.4666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-elongata_contig17746.4666.1 >prot_H-elongata_contig17746.4666.1 ID=prot_H-elongata_contig17746.4666.1|Name=mRNA_H-elongata_contig17746.4666.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=248bp MLLRKAFPDHGPSPSGYTMMDMGSSYGHLARKVAESYGCRVVCIELSVAAback to top mRNA from alignment at H-elongata_contig17746:954..5948+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-elongata_contig17746.4666.1 ID=mRNA_H-elongata_contig17746.4666.1|Name=mRNA_H-elongata_contig17746.4666.1|organism=Himanthalia elongata Himel1 dioecious|type=mRNA|length=4995bp|location=Sequence derived from alignment at H-elongata_contig17746:954..5948+ (Himanthalia elongata Himel1 dioecious)back to top Coding sequence (CDS) from alignment at H-elongata_contig17746:954..5948+ >mRNA_H-elongata_contig17746.4666.1 ID=mRNA_H-elongata_contig17746.4666.1|Name=mRNA_H-elongata_contig17746.4666.1|organism=Himanthalia elongata Himel1 dioecious|type=CDS|length=1488bp|location=Sequence derived from alignment at H-elongata_contig17746:954..5948+ (Himanthalia elongata Himel1 dioecious)back to top |