prot_H-elongata_contig17722.4651.1 (polypeptide) Himanthalia elongata Himel1 dioecious

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-elongata_contig17722.4651.1
Unique Nameprot_H-elongata_contig17722.4651.1
Typepolypeptide
OrganismHimanthalia elongata Himel1 dioecious (Himanthalia elongata Himel1 dioecious)
Sequence length68
Homology
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BLAST of mRNA_H-elongata_contig17722.4651.1 vs. uniprot
Match: A0A6H5JW78_9PHAE (Lipoxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW78_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.050e-18
Identity = 38/64 (59.38%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:    4 FGDKRVQGPLNTFRRHLEGIEDDIINESFQVVDAWRERGKNEKNAQNFAYYTLIPDCVPQSINI 67
            F DKRVQ PL  F++ +E IE D+INE+  V  +WR+RGK +K A NF Y TL+PD VPQSINI
Sbjct:  103 FSDKRVQAPLTKFQQAIEDIETDMINENAFVASSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 166
[Close]
BLAST of mRNA_H-elongata_contig17722.4651.1 vs. uniprot
Match: A0A6H5KD72_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KD72_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 2.520e-17
Identity = 38/64 (59.38%), Postives = 48/64 (75.00%), Query Frame = 0 
Query:    4 FGDKRVQGPLNTFRRHLEGIEDDIINESFQVVDAWRERGKNEKNAQNFAYYTLIPDCVPQSINI 67
            F DKRVQ PL  F++ +E IE D++NE+  VV +WR+RGK +K A NF Y TL+PD VPQSINI
Sbjct:  541 FSDKRVQAPLAKFQQAIEDIETDMVNENAFVVSSWRKRGKGKKAAANFGYTTLLPDKVPQSINI 604
[Close]
BLAST of mRNA_H-elongata_contig17722.4651.1 vs. uniprot
Match: D8LBX4_ECTSI (Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBX4_ECTSI)

HSP 1 Score: 77.8 bits (190), Expect = 3.710e-15
Identity = 33/66 (50.00%), Postives = 47/66 (71.21%), Query Frame = 0 
Query:    2 HHFGDKRVQGPLNTFRRHLEGIEDDIINESFQVVDAWRERGKNEKNAQNFAYYTLIPDCVPQSINI 67
            H+F D R+  PL  F++ +E IEDD++ ++  VV  WR+RGK ++ A N AY TL+PD +PQSINI
Sbjct:  587 HNFDDDRIAEPLAKFQQAIEDIEDDLVADNADVVSGWRQRGKAKRAANNMAYTTLLPDNIPQSINI 652
[Close]
BLAST of mRNA_H-elongata_contig17722.4651.1 vs. uniprot
Match: A0A6H5K920_9PHAE (Lipoxygenase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K920_9PHAE)

HSP 1 Score: 75.9 bits (185), Expect = 1.770e-14
Identity = 34/64 (53.12%), Postives = 47/64 (73.44%), Query Frame = 0 
Query:    4 FGDKRVQGPLNTFRRHLEGIEDDIINESFQVVDAWRERGKNEKNAQNFAYYTLIPDCVPQSINI 67
            F D+RV  PL  F++ LE IE D+++E+  VV +WR+RGK ++ A NF Y TL+P+ VPQSINI
Sbjct:  613 FSDQRVLAPLAKFQQALEDIETDMVDENAFVVSSWRKRGKEKRAAANFGYTTLLPEKVPQSINI 676
The following BLAST results are available for this feature:
BLAST of mRNA_H-elongata_contig17722.4651.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JW78_9PHAE1.050e-1859.38Lipoxygenase domain-containing protein n=1 Tax=Ect... [more]
A0A6H5KD72_9PHAE2.520e-1759.38Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
D8LBX4_ECTSI3.710e-1550.00Lipoxygenase n=2 Tax=Ectocarpus siliculosus TaxID=... [more]
A0A6H5K920_9PHAE1.770e-1453.13Lipoxygenase domain-containing protein n=2 Tax=Ect... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036226Lipoxigenase, C-terminal domain superfamilySUPERFAMILY48484Lipoxigenasecoord: 3..67

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-elongata_contig17722contigH-elongata_contig17722:3047..3687 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Himanthalia elongata Himel1 dioecious2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-elongata_contig17722.4651.1mRNA_H-elongata_contig17722.4651.1Himanthalia elongata Himel1 dioeciousmRNAH-elongata_contig17722 3036..3977 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-elongata_contig17722.4651.1 ID=prot_H-elongata_contig17722.4651.1|Name=mRNA_H-elongata_contig17722.4651.1|organism=Himanthalia elongata Himel1 dioecious|type=polypeptide|length=68bp
MHHFGDKRVQGPLNTFRRHLEGIEDDIINESFQVVDAWRERGKNEKNAQN
FAYYTLIPDCVPQSINI*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036226LipOase_C_sf